BLASTX nr result

ID: Coptis24_contig00016352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016352
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACH73029.1| coproporphyrinogen III oxidase [Ziziphus jujuba]        58   1e-06
ref|XP_004170545.1| PREDICTED: coproporphyrinogen-III oxidase, c...    58   2e-06
ref|XP_004147728.1| PREDICTED: coproporphyrinogen-III oxidase, c...    58   2e-06
gb|EGZ12631.1| hypothetical protein PHYSODRAFT_347458 [Phytophth...    58   2e-06
ref|XP_001754127.1| predicted protein [Physcomitrella patens sub...    58   2e-06

>gb|ACH73029.1| coproporphyrinogen III oxidase [Ziziphus jujuba]
          Length = 106

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/36 (69%), Positives = 30/36 (83%)
 Frame = +1

Query: 535 ECASSVFLAYMPIIERRKNMPFTKQQKLWQDIRRGR 642
           ECA+SV  AY+PIIE+RKN PFT +QK WQ +RRGR
Sbjct: 10  ECANSVIPAYIPIIEKRKNTPFTDRQKAWQQLRRGR 45


>ref|XP_004170545.1| PREDICTED: coproporphyrinogen-III oxidase, chloroplastic-like
           [Cucumis sativus]
          Length = 398

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/36 (69%), Positives = 30/36 (83%)
 Frame = +1

Query: 535 ECASSVFLAYMPIIERRKNMPFTKQQKLWQDIRRGR 642
           ECA+SV  AY+PIIERRK+ PFT+Q K WQ +RRGR
Sbjct: 302 ECANSVIPAYIPIIERRKDTPFTEQHKAWQQLRRGR 337


>ref|XP_004147728.1| PREDICTED: coproporphyrinogen-III oxidase, chloroplastic-like
           [Cucumis sativus]
          Length = 398

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/36 (69%), Positives = 30/36 (83%)
 Frame = +1

Query: 535 ECASSVFLAYMPIIERRKNMPFTKQQKLWQDIRRGR 642
           ECA+SV  AY+PIIERRK+ PFT+Q K WQ +RRGR
Sbjct: 302 ECANSVIPAYIPIIERRKDTPFTEQHKAWQQLRRGR 337


>gb|EGZ12631.1| hypothetical protein PHYSODRAFT_347458 [Phytophthora sojae]
          Length = 404

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = +1

Query: 538 CASSVFLAYMPIIERRKNMPFTKQQKLWQDIRRGR 642
           CA+S+  AY+PII++RK+MPFTKQQK WQ IRRGR
Sbjct: 284 CANSMLDAYLPIIKKRKDMPFTKQQKEWQQIRRGR 318


>ref|XP_001754127.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162694681|gb|EDQ81028.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 428

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 24/36 (66%), Positives = 31/36 (86%)
 Frame = +1

Query: 535 ECASSVFLAYMPIIERRKNMPFTKQQKLWQDIRRGR 642
           ECA++V  AY+PIIE+RK+MPFT +QK WQ +RRGR
Sbjct: 331 ECANAVIPAYIPIIEKRKDMPFTAEQKAWQQLRRGR 366


Top