BLASTX nr result

ID: Coptis24_contig00016343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016343
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19301.3| unnamed protein product [Vitis vinifera]              236   3e-60
ref|XP_002283694.2| PREDICTED: MADS-box transcription factor 27 ...   231   1e-58
ref|XP_002527350.1| mads box protein, putative [Ricinus communis...   219   3e-55
ref|XP_002307325.1| predicted protein [Populus trichocarpa] gi|2...   218   6e-55
ref|XP_003544838.1| PREDICTED: MADS-box transcription factor 27-...   217   1e-54

>emb|CBI19301.3| unnamed protein product [Vitis vinifera]
          Length = 240

 Score =  236 bits (601), Expect = 3e-60
 Identities = 121/161 (75%), Positives = 137/161 (85%), Gaps = 1/161 (0%)
 Frame = -1

Query: 635 NPTSEVKFWQREAANLRQQLHNLQENHRKLMGEELSGLSVKELQNLENQLEISLHGVRVQ 456
           NPTSEVKFWQREAA LRQQL +LQENHR++MGEELSGLSVK+LQNLENQLE+SL GVR++
Sbjct: 81  NPTSEVKFWQREAAMLRQQLQHLQENHRQMMGEELSGLSVKDLQNLENQLEMSLRGVRMK 140

Query: 455 KDQLLTNEIQELNKKGNLIHQENMELYKKVNLIRQENMELYKKVYGTRDXXXXXXXXXXX 276
           KDQ+L +EIQELN+KGNL+H EN+ELYKKVNLIRQENMELYKKVYGTR+           
Sbjct: 141 KDQILIDEIQELNQKGNLLHNENVELYKKVNLIRQENMELYKKVYGTRE-VNGTNRNAFT 199

Query: 275 NGFSVSEDLHFPIHLQLSQPEHQNYE-SPTRAAKLGRLQLQ 156
           NG S+ EDLH PIHLQL QP+ QNYE +P RA KLGRLQLQ
Sbjct: 200 NGLSIGEDLHVPIHLQLCQPQQQNYETTPARATKLGRLQLQ 240


>ref|XP_002283694.2| PREDICTED: MADS-box transcription factor 27 [Vitis vinifera]
          Length = 320

 Score =  231 bits (588), Expect = 1e-58
 Identities = 118/160 (73%), Positives = 135/160 (84%), Gaps = 1/160 (0%)
 Frame = -1

Query: 635 NPTSEVKFWQREAANLRQQLHNLQENHRKLMGEELSGLSVKELQNLENQLEISLHGVRVQ 456
           NPTSEVKFWQREAA LRQQL +LQENHR++MGEELSGLSVK+LQNLENQLE+SL GVR++
Sbjct: 81  NPTSEVKFWQREAAMLRQQLQHLQENHRQMMGEELSGLSVKDLQNLENQLEMSLRGVRMK 140

Query: 455 KDQLLTNEIQELNKKGNLIHQENMELYKKVNLIRQENMELYKKVYGTRDXXXXXXXXXXX 276
           KDQ+L +EIQELN+KGNL+H EN+ELYKKVNLIRQENMELYKKVYGTR+           
Sbjct: 141 KDQILIDEIQELNQKGNLLHNENVELYKKVNLIRQENMELYKKVYGTRE-VNGTNRNAFT 199

Query: 275 NGFSVSEDLHFPIHLQLSQPEHQNYE-SPTRAAKLGRLQL 159
           NG S+ EDLH PIHLQL QP+ QNYE +P RA KLGR Q+
Sbjct: 200 NGLSIGEDLHVPIHLQLCQPQQQNYETTPARATKLGRCQV 239


>ref|XP_002527350.1| mads box protein, putative [Ricinus communis]
           gi|223533269|gb|EEF35022.1| mads box protein, putative
           [Ricinus communis]
          Length = 262

 Score =  219 bits (558), Expect = 3e-55
 Identities = 108/155 (69%), Positives = 126/155 (81%)
 Frame = -1

Query: 635 NPTSEVKFWQREAANLRQQLHNLQENHRKLMGEELSGLSVKELQNLENQLEISLHGVRVQ 456
           NP SEVKFWQREAA LRQQL NLQENHR++MGEELSGLS+KELQNLE +LE+SL GVR++
Sbjct: 81  NPISEVKFWQREAAMLRQQLQNLQENHRQMMGEELSGLSIKELQNLEGRLEMSLRGVRMK 140

Query: 455 KDQLLTNEIQELNKKGNLIHQENMELYKKVNLIRQENMELYKKVYGTRDXXXXXXXXXXX 276
           KDQLL +EI+ELN+KGNLIHQEN+ELYKKVNLIRQEN ELYKKVYGT +           
Sbjct: 141 KDQLLMDEIEELNRKGNLIHQENVELYKKVNLIRQENTELYKKVYGTGNTNAANRDYLST 200

Query: 275 NGFSVSEDLHFPIHLQLSQPEHQNYESPTRAAKLG 171
           NG  + E+ + P+HLQLSQP+ QNY+ P R  KLG
Sbjct: 201 NGLGIGEEPNVPVHLQLSQPQQQNYDPPARTTKLG 235


>ref|XP_002307325.1| predicted protein [Populus trichocarpa] gi|222856774|gb|EEE94321.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  218 bits (556), Expect = 6e-55
 Identities = 108/155 (69%), Positives = 124/155 (80%)
 Frame = -1

Query: 635 NPTSEVKFWQREAANLRQQLHNLQENHRKLMGEELSGLSVKELQNLENQLEISLHGVRVQ 456
           NPTSE+KFWQRE A LRQQL NLQENHR++MGEELSGLSVK+LQNLENQLE+SL GVR++
Sbjct: 81  NPTSELKFWQRETAMLRQQLQNLQENHRQMMGEELSGLSVKDLQNLENQLEMSLRGVRMK 140

Query: 455 KDQLLTNEIQELNKKGNLIHQENMELYKKVNLIRQENMELYKKVYGTRDXXXXXXXXXXX 276
           KDQ L +EI ELN+KGNLIHQENMELYKK NLI  EN ELYKKVYGTR+           
Sbjct: 141 KDQNLMDEILELNRKGNLIHQENMELYKKANLICHENQELYKKVYGTREVNGANRNSLLT 200

Query: 275 NGFSVSEDLHFPIHLQLSQPEHQNYESPTRAAKLG 171
           NG  + E+ H P+HLQLSQP+ QNY++P  A KLG
Sbjct: 201 NGLGMGEESHVPVHLQLSQPQQQNYDTPASATKLG 235


>ref|XP_003544838.1| PREDICTED: MADS-box transcription factor 27-like [Glycine max]
          Length = 239

 Score =  217 bits (553), Expect = 1e-54
 Identities = 111/156 (71%), Positives = 129/156 (82%)
 Frame = -1

Query: 626 SEVKFWQREAANLRQQLHNLQENHRKLMGEELSGLSVKELQNLENQLEISLHGVRVQKDQ 447
           SE+KFWQREAA LRQQLHNLQE+HRK+MGEELSGL+VKELQNLENQLEISL GVR++KDQ
Sbjct: 84  SEIKFWQREAAMLRQQLHNLQESHRKMMGEELSGLTVKELQNLENQLEISLRGVRMKKDQ 143

Query: 446 LLTNEIQELNKKGNLIHQENMELYKKVNLIRQENMELYKKVYGTRDXXXXXXXXXXXNGF 267
           LL +EIQELN+KGNLIHQEN+ELY+KVNLI QENMEL KKVYGT+D           NG 
Sbjct: 144 LLMDEIQELNRKGNLIHQENVELYQKVNLICQENMELKKKVYGTKDDNKTNRDSVLTNGL 203

Query: 266 SVSEDLHFPIHLQLSQPEHQNYESPTRAAKLGRLQL 159
            + EDL  P++LQLSQP+ Q+Y+ P+   KLG LQL
Sbjct: 204 GIGEDLQVPVNLQLSQPQQQHYKEPSGTTKLG-LQL 238


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