BLASTX nr result

ID: Coptis24_contig00016341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016341
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002985482.1| hypothetical protein SELMODRAFT_269009 [Sela...    61   1e-07
emb|CBI35901.3| unnamed protein product [Vitis vinifera]               61   1e-07
gb|ACJ86147.1| unknown [Medicago truncatula]                           61   1e-07
ref|XP_002276785.1| PREDICTED: 60S ribosomal protein L9 [Vitis v...    61   1e-07
ref|XP_003602417.1| Ribosomal protein L9 [Medicago truncatula] g...    61   1e-07

>ref|XP_002985482.1| hypothetical protein SELMODRAFT_269009 [Selaginella moellendorffii]
           gi|302810797|ref|XP_002987089.1| hypothetical protein
           SELMODRAFT_158459 [Selaginella moellendorffii]
           gi|300145254|gb|EFJ11932.1| hypothetical protein
           SELMODRAFT_158459 [Selaginella moellendorffii]
           gi|300146688|gb|EFJ13356.1| hypothetical protein
           SELMODRAFT_269009 [Selaginella moellendorffii]
          Length = 190

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = +2

Query: 86  MEQKCHVKNKDIRKFLDGIYVSEKGTVATEE 178
           + QKCHVKNKDIRKFLDGIYVSEKGT+A EE
Sbjct: 160 INQKCHVKNKDIRKFLDGIYVSEKGTIAEEE 190


>emb|CBI35901.3| unnamed protein product [Vitis vinifera]
          Length = 100

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = +2

Query: 86  MEQKCHVKNKDIRKFLDGIYVSEKGTVATEE 178
           + QKCHVKNKDIRKFLDGIYVSEKGT+A EE
Sbjct: 70  INQKCHVKNKDIRKFLDGIYVSEKGTIAEEE 100


>gb|ACJ86147.1| unknown [Medicago truncatula]
          Length = 193

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = +2

Query: 77  CVSMEQKCHVKNKDIRKFLDGIYVSEKGTVATEE 178
           C  + QKCHVK KDIRKFLDGIYVSEKG+V TEE
Sbjct: 160 CALINQKCHVKKKDIRKFLDGIYVSEKGSVVTEE 193


>ref|XP_002276785.1| PREDICTED: 60S ribosomal protein L9 [Vitis vinifera]
          Length = 193

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = +2

Query: 86  MEQKCHVKNKDIRKFLDGIYVSEKGTVATEE 178
           + QKCHVKNKDIRKFLDGIYVSEKGT+A EE
Sbjct: 163 INQKCHVKNKDIRKFLDGIYVSEKGTIAEEE 193


>ref|XP_003602417.1| Ribosomal protein L9 [Medicago truncatula]
           gi|355491465|gb|AES72668.1| Ribosomal protein L9
           [Medicago truncatula] gi|388504154|gb|AFK40143.1|
           unknown [Medicago truncatula]
          Length = 193

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = +2

Query: 77  CVSMEQKCHVKNKDIRKFLDGIYVSEKGTVATEE 178
           C  + QKCHVK KDIRKFLDGIYVSEKG+V TEE
Sbjct: 160 CALINQKCHVKKKDIRKFLDGIYVSEKGSVVTEE 193


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