BLASTX nr result
ID: Coptis24_contig00016339
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00016339 (612 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264623.1| PREDICTED: ras-related protein RABD1 [Vitis ... 159 3e-37 ref|XP_002526430.1| protein with unknown function [Ricinus commu... 158 6e-37 ref|XP_002328790.1| predicted protein [Populus trichocarpa] gi|2... 155 4e-36 gb|AEA92308.1| Rab4 [Hevea brasiliensis] 155 5e-36 ref|XP_002331089.1| predicted protein [Populus trichocarpa] gi|1... 154 2e-35 >ref|XP_002264623.1| PREDICTED: ras-related protein RABD1 [Vitis vinifera] gi|297739505|emb|CBI29687.3| unnamed protein product [Vitis vinifera] Length = 202 Score = 159 bits (403), Expect = 3e-37 Identities = 77/90 (85%), Positives = 85/90 (94%) Frame = -2 Query: 611 KQWLNEIDRYANESVCKLLVGNKCDLAENKVVDTQTAKAFADELGIPFLETSAKDSINVE 432 KQWLNEIDRYAN+SVCKLLVGNKCDL ENKVVDT+TAKAFADELGIPFLETSAKDSINVE Sbjct: 100 KQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTETAKAFADELGIPFLETSAKDSINVE 159 Query: 431 QAFLTMAGEIKKRIGNQSSSNTKPASTVQM 342 QAFLTMAGEIKK++GNQ ++ + +STVQM Sbjct: 160 QAFLTMAGEIKKKMGNQPNATARSSSTVQM 189 >ref|XP_002526430.1| protein with unknown function [Ricinus communis] gi|223534210|gb|EEF35925.1| protein with unknown function [Ricinus communis] Length = 202 Score = 158 bits (400), Expect = 6e-37 Identities = 77/90 (85%), Positives = 83/90 (92%) Frame = -2 Query: 611 KQWLNEIDRYANESVCKLLVGNKCDLAENKVVDTQTAKAFADELGIPFLETSAKDSINVE 432 KQWLNEIDRYAN+SVCKLLVGNKCDL ENKVVDTQTAKAFADELGIPFLETSAKDSINVE Sbjct: 100 KQWLNEIDRYANDSVCKLLVGNKCDLIENKVVDTQTAKAFADELGIPFLETSAKDSINVE 159 Query: 431 QAFLTMAGEIKKRIGNQSSSNTKPASTVQM 342 QAFLTMAGEIK+++GNQ ++N TVQM Sbjct: 160 QAFLTMAGEIKRKMGNQPTANKSTGGTVQM 189 >ref|XP_002328790.1| predicted protein [Populus trichocarpa] gi|222839088|gb|EEE77439.1| predicted protein [Populus trichocarpa] Length = 201 Score = 155 bits (393), Expect = 4e-36 Identities = 78/90 (86%), Positives = 84/90 (93%) Frame = -2 Query: 611 KQWLNEIDRYANESVCKLLVGNKCDLAENKVVDTQTAKAFADELGIPFLETSAKDSINVE 432 KQWLNEIDRYAN+SVCKLLVGNKCDL ENKVVDTQTAKAFADELGIPFLETSAKDSINVE Sbjct: 100 KQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVE 159 Query: 431 QAFLTMAGEIKKRIGNQSSSNTKPASTVQM 342 QAFLTMAGEIKK++GNQ ++ +K TVQM Sbjct: 160 QAFLTMAGEIKKKMGNQPTA-SKSTGTVQM 188 >gb|AEA92308.1| Rab4 [Hevea brasiliensis] Length = 202 Score = 155 bits (392), Expect = 5e-36 Identities = 75/90 (83%), Positives = 84/90 (93%) Frame = -2 Query: 611 KQWLNEIDRYANESVCKLLVGNKCDLAENKVVDTQTAKAFADELGIPFLETSAKDSINVE 432 KQWLNEIDRYAN+SVCKLLVGNKCDL +NKVVDTQTAKAFADELGIPFLETSAKDSINVE Sbjct: 100 KQWLNEIDRYANDSVCKLLVGNKCDLVDNKVVDTQTAKAFADELGIPFLETSAKDSINVE 159 Query: 431 QAFLTMAGEIKKRIGNQSSSNTKPASTVQM 342 QAFLTMAGEIKK++G+Q +++ +TVQM Sbjct: 160 QAFLTMAGEIKKKMGSQPAASKSTGTTVQM 189 >ref|XP_002331089.1| predicted protein [Populus trichocarpa] gi|118486589|gb|ABK95133.1| unknown [Populus trichocarpa] gi|222872817|gb|EEF09948.1| predicted protein [Populus trichocarpa] Length = 201 Score = 154 bits (388), Expect = 2e-35 Identities = 77/90 (85%), Positives = 82/90 (91%) Frame = -2 Query: 611 KQWLNEIDRYANESVCKLLVGNKCDLAENKVVDTQTAKAFADELGIPFLETSAKDSINVE 432 KQWLNEIDRYAN+SVCKLLVGNKCDL ENKVVDTQTAKAFADELGIPFLETSAKDSINVE Sbjct: 100 KQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVE 159 Query: 431 QAFLTMAGEIKKRIGNQSSSNTKPASTVQM 342 QAFLTMAGEIKK++ NQ ++N TVQM Sbjct: 160 QAFLTMAGEIKKKMSNQPTANNS-TGTVQM 188