BLASTX nr result

ID: Coptis24_contig00016339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016339
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264623.1| PREDICTED: ras-related protein RABD1 [Vitis ...   159   3e-37
ref|XP_002526430.1| protein with unknown function [Ricinus commu...   158   6e-37
ref|XP_002328790.1| predicted protein [Populus trichocarpa] gi|2...   155   4e-36
gb|AEA92308.1| Rab4 [Hevea brasiliensis]                              155   5e-36
ref|XP_002331089.1| predicted protein [Populus trichocarpa] gi|1...   154   2e-35

>ref|XP_002264623.1| PREDICTED: ras-related protein RABD1 [Vitis vinifera]
           gi|297739505|emb|CBI29687.3| unnamed protein product
           [Vitis vinifera]
          Length = 202

 Score =  159 bits (403), Expect = 3e-37
 Identities = 77/90 (85%), Positives = 85/90 (94%)
 Frame = -2

Query: 611 KQWLNEIDRYANESVCKLLVGNKCDLAENKVVDTQTAKAFADELGIPFLETSAKDSINVE 432
           KQWLNEIDRYAN+SVCKLLVGNKCDL ENKVVDT+TAKAFADELGIPFLETSAKDSINVE
Sbjct: 100 KQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTETAKAFADELGIPFLETSAKDSINVE 159

Query: 431 QAFLTMAGEIKKRIGNQSSSNTKPASTVQM 342
           QAFLTMAGEIKK++GNQ ++  + +STVQM
Sbjct: 160 QAFLTMAGEIKKKMGNQPNATARSSSTVQM 189


>ref|XP_002526430.1| protein with unknown function [Ricinus communis]
           gi|223534210|gb|EEF35925.1| protein with unknown
           function [Ricinus communis]
          Length = 202

 Score =  158 bits (400), Expect = 6e-37
 Identities = 77/90 (85%), Positives = 83/90 (92%)
 Frame = -2

Query: 611 KQWLNEIDRYANESVCKLLVGNKCDLAENKVVDTQTAKAFADELGIPFLETSAKDSINVE 432
           KQWLNEIDRYAN+SVCKLLVGNKCDL ENKVVDTQTAKAFADELGIPFLETSAKDSINVE
Sbjct: 100 KQWLNEIDRYANDSVCKLLVGNKCDLIENKVVDTQTAKAFADELGIPFLETSAKDSINVE 159

Query: 431 QAFLTMAGEIKKRIGNQSSSNTKPASTVQM 342
           QAFLTMAGEIK+++GNQ ++N     TVQM
Sbjct: 160 QAFLTMAGEIKRKMGNQPTANKSTGGTVQM 189


>ref|XP_002328790.1| predicted protein [Populus trichocarpa] gi|222839088|gb|EEE77439.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  155 bits (393), Expect = 4e-36
 Identities = 78/90 (86%), Positives = 84/90 (93%)
 Frame = -2

Query: 611 KQWLNEIDRYANESVCKLLVGNKCDLAENKVVDTQTAKAFADELGIPFLETSAKDSINVE 432
           KQWLNEIDRYAN+SVCKLLVGNKCDL ENKVVDTQTAKAFADELGIPFLETSAKDSINVE
Sbjct: 100 KQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVE 159

Query: 431 QAFLTMAGEIKKRIGNQSSSNTKPASTVQM 342
           QAFLTMAGEIKK++GNQ ++ +K   TVQM
Sbjct: 160 QAFLTMAGEIKKKMGNQPTA-SKSTGTVQM 188


>gb|AEA92308.1| Rab4 [Hevea brasiliensis]
          Length = 202

 Score =  155 bits (392), Expect = 5e-36
 Identities = 75/90 (83%), Positives = 84/90 (93%)
 Frame = -2

Query: 611 KQWLNEIDRYANESVCKLLVGNKCDLAENKVVDTQTAKAFADELGIPFLETSAKDSINVE 432
           KQWLNEIDRYAN+SVCKLLVGNKCDL +NKVVDTQTAKAFADELGIPFLETSAKDSINVE
Sbjct: 100 KQWLNEIDRYANDSVCKLLVGNKCDLVDNKVVDTQTAKAFADELGIPFLETSAKDSINVE 159

Query: 431 QAFLTMAGEIKKRIGNQSSSNTKPASTVQM 342
           QAFLTMAGEIKK++G+Q +++    +TVQM
Sbjct: 160 QAFLTMAGEIKKKMGSQPAASKSTGTTVQM 189


>ref|XP_002331089.1| predicted protein [Populus trichocarpa] gi|118486589|gb|ABK95133.1|
           unknown [Populus trichocarpa]
           gi|222872817|gb|EEF09948.1| predicted protein [Populus
           trichocarpa]
          Length = 201

 Score =  154 bits (388), Expect = 2e-35
 Identities = 77/90 (85%), Positives = 82/90 (91%)
 Frame = -2

Query: 611 KQWLNEIDRYANESVCKLLVGNKCDLAENKVVDTQTAKAFADELGIPFLETSAKDSINVE 432
           KQWLNEIDRYAN+SVCKLLVGNKCDL ENKVVDTQTAKAFADELGIPFLETSAKDSINVE
Sbjct: 100 KQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVE 159

Query: 431 QAFLTMAGEIKKRIGNQSSSNTKPASTVQM 342
           QAFLTMAGEIKK++ NQ ++N     TVQM
Sbjct: 160 QAFLTMAGEIKKKMSNQPTANNS-TGTVQM 188


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