BLASTX nr result

ID: Coptis24_contig00016333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016333
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310794.1| predicted protein [Populus trichocarpa] gi|2...   181   1e-43
ref|XP_002327699.1| predicted protein [Populus trichocarpa] gi|2...   177   2e-42
gb|ABR16990.1| unknown [Picea sitchensis]                             175   1e-41
ref|XP_003537563.1| PREDICTED: minor allergen Alt a 7-like [Glyc...   169   8e-40
ref|XP_002280986.1| PREDICTED: minor allergen Alt a 7 [Vitis vin...   168   1e-39

>ref|XP_002310794.1| predicted protein [Populus trichocarpa] gi|222853697|gb|EEE91244.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score =  181 bits (460), Expect = 1e-43
 Identities = 103/192 (53%), Positives = 119/192 (61%), Gaps = 3/192 (1%)
 Frame = +1

Query: 190 MGKGGGCVPSKKRAPVVASPE---ERDSEXXXXXTSNNNDIVTTHVEEXXXXXXXXXXXX 360
           MGKGGGCVPSKK+ P V+       R++E         ND+ +T +E             
Sbjct: 1   MGKGGGCVPSKKKQPPVSDDPVSTTREAEPIPVNDEETNDVASTSLEPTIS--------- 51

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXSKLKIFIVFYSMYGHVEGLAKRMKKGVDLIEGVQ 540
                                     SKLK+FIVFYSMYGHVEGLAKRMKKGVD +EGV+
Sbjct: 52  --------------------------SKLKVFIVFYSMYGHVEGLAKRMKKGVDGVEGVE 85

Query: 541 GYLYRVPETLSIQVLEQMKVPQKDGGIEVISNAEELVQADGILFGFPARYGSMAAQMKSF 720
            +LYRV ETLS  VL +MKVP+KD GI  I+ A ELV ADG+LFGFP RYG MAAQMK+F
Sbjct: 86  AFLYRVAETLSDDVLIKMKVPEKDVGIPEIT-AAELVNADGVLFGFPTRYGCMAAQMKAF 144

Query: 721 FDSTGQLWKEQK 756
           FDSTGQLWKEQK
Sbjct: 145 FDSTGQLWKEQK 156


>ref|XP_002327699.1| predicted protein [Populus trichocarpa] gi|222836784|gb|EEE75177.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  177 bits (449), Expect = 2e-42
 Identities = 103/191 (53%), Positives = 115/191 (60%), Gaps = 2/191 (1%)
 Frame = +1

Query: 190 MGKGGGCVPSKKRAPVVASP--EERDSEXXXXXTSNNNDIVTTHVEEXXXXXXXXXXXXX 363
           MGKGGGCVPSKK+ P V+      R++           D+ TT +E              
Sbjct: 1   MGKGGGCVPSKKKQPPVSDDPVSSREAAPIPVHDDETIDVATTSLEPRIP---------- 50

Query: 364 XXXXXXXXXXXXXXXXXXXXXXXXXSKLKIFIVFYSMYGHVEGLAKRMKKGVDLIEGVQG 543
                                    SKLKIFIVFYSMYGHVEGLAKRMKKGVD +EGV+ 
Sbjct: 51  -------------------------SKLKIFIVFYSMYGHVEGLAKRMKKGVDGVEGVEA 85

Query: 544 YLYRVPETLSIQVLEQMKVPQKDGGIEVISNAEELVQADGILFGFPARYGSMAAQMKSFF 723
           +LYRV ETLS  VL +MK P KD GI  I+ A ELV ADG+LFGFP RYG MAAQMKSFF
Sbjct: 86  FLYRVAETLSDDVLMKMKAPGKDVGIPEIT-AAELVNADGVLFGFPTRYGCMAAQMKSFF 144

Query: 724 DSTGQLWKEQK 756
           DSTGQLWKEQK
Sbjct: 145 DSTGQLWKEQK 155


>gb|ABR16990.1| unknown [Picea sitchensis]
          Length = 272

 Score =  175 bits (443), Expect = 1e-41
 Identities = 101/190 (53%), Positives = 116/190 (61%), Gaps = 2/190 (1%)
 Frame = +1

Query: 190 MGKGGGCVPS--KKRAPVVASPEERDSEXXXXXTSNNNDIVTTHVEEXXXXXXXXXXXXX 363
           MGKGGGCVPS  +KR P V S  + D         NNNDI    VEE             
Sbjct: 1   MGKGGGCVPSSSRKRLPGVGSSHKEDPNADLPQ-ENNNDISEKPVEEALGHEDPPPILED 59

Query: 364 XXXXXXXXXXXXXXXXXXXXXXXXXSKLKIFIVFYSMYGHVEGLAKRMKKGVDLIEGVQG 543
                                     KL+IF+VFYSMYGHVE LAK+MK+G+D IEGV+G
Sbjct: 60  AASSLPLSSPR---------------KLRIFVVFYSMYGHVEALAKKMKEGIDAIEGVEG 104

Query: 544 YLYRVPETLSIQVLEQMKVPQKDGGIEVISNAEELVQADGILFGFPARYGSMAAQMKSFF 723
            LYRVPE LS QVLEQM+ P KD  I VI+ AEEL  ADG+LFGFP RYG+MAAQMK+FF
Sbjct: 105 TLYRVPEILSAQVLEQMRAPPKDESIPVIT-AEELTAADGLLFGFPTRYGAMAAQMKAFF 163

Query: 724 DSTGQLWKEQ 753
           DSTG+LW+EQ
Sbjct: 164 DSTGKLWREQ 173


>ref|XP_003537563.1| PREDICTED: minor allergen Alt a 7-like [Glycine max]
          Length = 263

 Score =  169 bits (427), Expect = 8e-40
 Identities = 95/189 (50%), Positives = 110/189 (58%)
 Frame = +1

Query: 190 MGKGGGCVPSKKRAPVVASPEERDSEXXXXXTSNNNDIVTTHVEEXXXXXXXXXXXXXXX 369
           MGKGGGCVPSKK+ P VA      +        N       H  +               
Sbjct: 1   MGKGGGCVPSKKKPPPVADDAPAPTPPPISPPDN------AHARKPDAPAQVAREAASSS 54

Query: 370 XXXXXXXXXXXXXXXXXXXXXXXSKLKIFIVFYSMYGHVEGLAKRMKKGVDLIEGVQGYL 549
                                  ++LK+F+VFYSMYGHVEGLAKR+KKGVD +EGV+G L
Sbjct: 55  SSLPGG-----------------ARLKVFVVFYSMYGHVEGLAKRLKKGVDGVEGVEGVL 97

Query: 550 YRVPETLSIQVLEQMKVPQKDGGIEVISNAEELVQADGILFGFPARYGSMAAQMKSFFDS 729
           YRVPETL I+VL QM+ P KD  I  I+ A EL  ADG+LFGFP RYGSMAAQMK+FFDS
Sbjct: 98  YRVPETLPIEVLNQMRAPPKDDAIPEIT-AAELTAADGVLFGFPTRYGSMAAQMKAFFDS 156

Query: 730 TGQLWKEQK 756
           TG LWKEQK
Sbjct: 157 TGHLWKEQK 165


>ref|XP_002280986.1| PREDICTED: minor allergen Alt a 7 [Vitis vinifera]
           gi|297741422|emb|CBI32553.3| unnamed protein product
           [Vitis vinifera]
          Length = 256

 Score =  168 bits (425), Expect = 1e-39
 Identities = 94/189 (49%), Positives = 116/189 (61%)
 Frame = +1

Query: 190 MGKGGGCVPSKKRAPVVASPEERDSEXXXXXTSNNNDIVTTHVEEXXXXXXXXXXXXXXX 369
           MGKGGGCV SKKR P   S +  + +     T     ++ T + E               
Sbjct: 1   MGKGGGCVLSKKRMPPSVSDDPPNED-----TDIPVPLLDTAIPEAGDLNSP-------- 47

Query: 370 XXXXXXXXXXXXXXXXXXXXXXXSKLKIFIVFYSMYGHVEGLAKRMKKGVDLIEGVQGYL 549
                                  SKL+IFIVFYSMYGHVE LA+R+K GVD ++GV+G L
Sbjct: 48  -----------------------SKLRIFIVFYSMYGHVEILARRIKSGVDSVDGVEGVL 84

Query: 550 YRVPETLSIQVLEQMKVPQKDGGIEVISNAEELVQADGILFGFPARYGSMAAQMKSFFDS 729
           +R+PET+  +VLEQMKVPQK   + V+S A ELV+ADG+LFGFP RYGSMAAQMK+FFDS
Sbjct: 85  FRIPETMPPEVLEQMKVPQKADDVPVMSEAAELVEADGLLFGFPTRYGSMAAQMKAFFDS 144

Query: 730 TGQLWKEQK 756
           TGQLW+EQK
Sbjct: 145 TGQLWREQK 153


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