BLASTX nr result

ID: Coptis24_contig00016331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016331
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75064.1| hypothetical protein VITISV_025472 [Vitis vinifera]    69   6e-10
ref|XP_002522091.1| conserved hypothetical protein [Ricinus comm...    67   4e-09
emb|CBI25120.3| unnamed protein product [Vitis vinifera]               59   7e-07
ref|XP_003561410.1| PREDICTED: uncharacterized protein LOC100835...    58   2e-06
ref|XP_002313930.1| predicted protein [Populus trichocarpa] gi|2...    57   3e-06

>emb|CAN75064.1| hypothetical protein VITISV_025472 [Vitis vinifera]
          Length = 1013

 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 57/160 (35%), Positives = 74/160 (46%), Gaps = 29/160 (18%)
 Frame = -1

Query: 546  LKQKKATSPR-VGDAFQQVLSKKTISRSLSACSEQDQ-YWSRVQPTET--VGDSGPSEVS 379
            LKQ+K  +P        Q+L+KK      ++     Q   SR  PTE   VG+S PSE+S
Sbjct: 840  LKQQKPPTPSPAAIPMDQLLAKKLAPIPTASVENTHQGLSSRNWPTEVDMVGESCPSEMS 899

Query: 378  S-------------------SYKRSLGGFGQRGSERVNEVQSQEK------RHKRXXXXX 274
            S                    Y      + Q+GS+  +E QSQE+      + +      
Sbjct: 900  SFQRSTSYGKRGSKGASFTSEYSMGSPSYNQKGSKGASEAQSQERGLRKSNKRESLASSS 959

Query: 273  XXXXXXXXXXSFTTYEKIQSKHRCGEEEVVTPVRRSSRIR 154
                      SFT+YEKI  KH CG+EEVVTPVRRSSRIR
Sbjct: 960  EYSTGSPSYGSFTSYEKIHIKHGCGDEEVVTPVRRSSRIR 999


>ref|XP_002522091.1| conserved hypothetical protein [Ricinus communis]
            gi|223538690|gb|EEF40291.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 868

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 45/99 (45%), Positives = 59/99 (59%), Gaps = 7/99 (7%)
 Frame = -1

Query: 414  ETVGDSGPSEVSSSYKRSLGGFGQRGSERV-NEVQSQEKRHKRXXXXXXXXXXXXXXXS- 241
            ET G+S PSE+SS    S   + ++G +R+ +E QSQE++ KR               S 
Sbjct: 770  ETTGESCPSEMSSFQYSSSSYYSKQGQKRMTSEAQSQERKPKRSTRRESMASSDCSMGSS 829

Query: 240  ----FTTYEKIQSKHRCGEEEVVTPVRRSSRIR-KITSP 139
                FTTYEKI +KH  GEE  VTPVRRSSRI+ ++TSP
Sbjct: 830  SYGSFTTYEKITNKHGNGEEVWVTPVRRSSRIKNQVTSP 868


>emb|CBI25120.3| unnamed protein product [Vitis vinifera]
          Length = 137

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
 Frame = -1

Query: 351 FGQRGSERVNEVQSQEK------RHKRXXXXXXXXXXXXXXXSFTTYEKIQSKHRCGEEE 190
           + Q+GS+  +E QSQE+      + +                SFT+YEKI  KH CG+EE
Sbjct: 6   YNQKGSKGASEAQSQERGLRKSNKRESLASSSEYSTGSPSYGSFTSYEKIHIKHGCGDEE 65

Query: 189 VVTPVRRSSRIRKIT 145
           VVTPVRRSSRIR  T
Sbjct: 66  VVTPVRRSSRIRNQT 80


>ref|XP_003561410.1| PREDICTED: uncharacterized protein LOC100835292 [Brachypodium
           distachyon]
          Length = 487

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 38/98 (38%), Positives = 51/98 (52%)
 Frame = -1

Query: 432 SRVQPTETVGDSGPSEVSSSYKRSLGGFGQRGSERVNEVQSQEKRHKRXXXXXXXXXXXX 253
           S+++  E  G+SG S+ SSS      G G+R   +  E  S E   KR            
Sbjct: 397 SKMEEPERFGNSGFSQYSSSLS---SGHGKRRKAKEEESLSLEPMSKRESYSTSSYGS-- 451

Query: 252 XXXSFTTYEKIQSKHRCGEEEVVTPVRRSSRIRKITSP 139
               FTTYEKI +K R  E+E +TPVRRSSR+R + +P
Sbjct: 452 ----FTTYEKISAKKRNKEDEAMTPVRRSSRLRNVKAP 485


>ref|XP_002313930.1| predicted protein [Populus trichocarpa] gi|222850338|gb|EEE87885.1|
            predicted protein [Populus trichocarpa]
          Length = 793

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 46/142 (32%), Positives = 66/142 (46%), Gaps = 6/142 (4%)
 Frame = -1

Query: 546  LKQKKATSPRVGDAFQQV-LSKKTISRSLSACSEQDQYWSRVQPTETVGDSGPSEVSSSY 370
            +K +  T+        QV ++KK     LS  +E +         +  G+S  SE+SS +
Sbjct: 662  MKSRAPTAQNATFTVDQVPITKKLDFCPLSVAAEHE---------DIAGESCSSEMSS-F 711

Query: 369  KRSLGGFGQRGSERVNEVQSQEKRHKRXXXXXXXXXXXXXXXS----FTTYEKIQSKHRC 202
              S    GQ+G       + ++  H+R                    FTTYEKI SKH  
Sbjct: 712  SLSYSKKGQKGKSEAQNSKPRKSNHRRESMASSDYSVGSMGSPSYGSFTTYEKIPSKHGN 771

Query: 201  GEEEVVTPVRRSSRIR-KITSP 139
             +EEV+TPVRRSSRIR ++ SP
Sbjct: 772  ADEEVITPVRRSSRIRHQVISP 793


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