BLASTX nr result

ID: Coptis24_contig00016306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016306
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262601.1| PREDICTED: BTB/POZ domain-containing protein...    96   2e-18
ref|XP_002297956.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
emb|CBI34559.3| unnamed protein product [Vitis vinifera]               92   6e-17
ref|XP_002518882.1| protein binding protein, putative [Ricinus c...    89   3e-16
ref|XP_002304573.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16

>ref|XP_002262601.1| PREDICTED: BTB/POZ domain-containing protein At3g05675 isoform 1
           [Vitis vinifera] gi|359474133|ref|XP_003631407.1|
           PREDICTED: BTB/POZ domain-containing protein At3g05675
           isoform 2 [Vitis vinifera]
          Length = 431

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 43/57 (75%), Positives = 49/57 (85%)
 Frame = +1

Query: 1   ALPSNDQADILVEWMQTQPLRYPDLSEAFEIWCYRTKSAKRRLLVGFDNANNATVSL 171
           ALPSNDQADIL +WM+T+ +RYPDLSEAFE+WCYRTKSAKRRL+ G D   NA VSL
Sbjct: 375 ALPSNDQADILADWMKTEQVRYPDLSEAFEVWCYRTKSAKRRLVEGLDKVGNAAVSL 431


>ref|XP_002297956.1| predicted protein [Populus trichocarpa] gi|222845214|gb|EEE82761.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 42/57 (73%), Positives = 47/57 (82%)
 Frame = +1

Query: 1   ALPSNDQADILVEWMQTQPLRYPDLSEAFEIWCYRTKSAKRRLLVGFDNANNATVSL 171
           ALPSNDQADIL +WM+   +RYPDLSEAFE+WCYRTKSAKRRL+ G D   N TVSL
Sbjct: 375 ALPSNDQADILADWMKADQVRYPDLSEAFEVWCYRTKSAKRRLVEGLDRVGNTTVSL 431


>emb|CBI34559.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 40/53 (75%), Positives = 46/53 (86%)
 Frame = +1

Query: 1   ALPSNDQADILVEWMQTQPLRYPDLSEAFEIWCYRTKSAKRRLLVGFDNANNA 159
           ALPSNDQADIL +WM+T+ +RYPDLSEAFE+WCYRTKSAKRRL+ G D   NA
Sbjct: 353 ALPSNDQADILADWMKTEQVRYPDLSEAFEVWCYRTKSAKRRLVEGLDKVGNA 405


>ref|XP_002518882.1| protein binding protein, putative [Ricinus communis]
           gi|223541869|gb|EEF43415.1| protein binding protein,
           putative [Ricinus communis]
          Length = 434

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 39/54 (72%), Positives = 45/54 (83%)
 Frame = +1

Query: 1   ALPSNDQADILVEWMQTQPLRYPDLSEAFEIWCYRTKSAKRRLLVGFDNANNAT 162
           ALPSNDQADIL +WM+   +RYPDLSEAFE+WCYRTKSAKRRL+ G D   NA+
Sbjct: 375 ALPSNDQADILADWMKADQVRYPDLSEAFEVWCYRTKSAKRRLVEGLDKVGNAS 428


>ref|XP_002304573.1| predicted protein [Populus trichocarpa] gi|222842005|gb|EEE79552.1|
           predicted protein [Populus trichocarpa]
          Length = 288

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 40/57 (70%), Positives = 45/57 (78%)
 Frame = +1

Query: 1   ALPSNDQADILVEWMQTQPLRYPDLSEAFEIWCYRTKSAKRRLLVGFDNANNATVSL 171
           ALPSNDQADIL +WM+   + YPDLSEAFE+WCYRTKSAKRRL  G    +N TVSL
Sbjct: 231 ALPSNDQADILADWMEADQVSYPDLSEAFEVWCYRTKSAKRRLAEGLRRVDNTTVSL 287


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