BLASTX nr result

ID: Coptis24_contig00016303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016303
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25085.3| unnamed protein product [Vitis vinifera]               73   3e-11
ref|XP_002272862.1| PREDICTED: uncharacterized protein LOC100266...    69   5e-10
ref|XP_002522053.1| conserved hypothetical protein [Ricinus comm...    68   9e-10
ref|XP_002313940.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002869199.1| AT4g33690/T16L1_180 [Arabidopsis lyrata subs...    64   1e-08

>emb|CBI25085.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/57 (66%), Positives = 44/57 (77%), Gaps = 3/57 (5%)
 Frame = -1

Query: 224 GEMDLETENQI---LMNEAAELMCQADQEGIHFYLQEQEVRYRPNPHFLAATALGVQ 63
           GEMDLETEN+I   LM EAAEL  QA++EG+H YLQ+ +VR RPN  FL AT LGVQ
Sbjct: 165 GEMDLETENRIAAILMKEAAELRRQAEKEGVHVYLQKPQVRGRPNSRFLTATVLGVQ 221


>ref|XP_002272862.1| PREDICTED: uncharacterized protein LOC100266970 [Vitis vinifera]
           gi|147815299|emb|CAN61243.1| hypothetical protein
           VITISV_016134 [Vitis vinifera]
          Length = 254

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/55 (65%), Positives = 42/55 (76%), Gaps = 3/55 (5%)
 Frame = -1

Query: 218 MDLETENQI---LMNEAAELMCQADQEGIHFYLQEQEVRYRPNPHFLAATALGVQ 63
           MDLETEN+I   LM EAAEL  QA++EG+H YLQ+ +VR RPN  FL AT LGVQ
Sbjct: 1   MDLETENRIAAILMKEAAELRRQAEKEGVHVYLQKPQVRGRPNSRFLTATVLGVQ 55


>ref|XP_002522053.1| conserved hypothetical protein [Ricinus communis]
           gi|223538652|gb|EEF40253.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 252

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/55 (61%), Positives = 41/55 (74%), Gaps = 3/55 (5%)
 Frame = -1

Query: 218 MDLETENQI---LMNEAAELMCQADQEGIHFYLQEQEVRYRPNPHFLAATALGVQ 63
           MDLETEN+I   L+ EAAEL CQA++EG+H YLQ+  +R RPN  FL AT  GVQ
Sbjct: 1   MDLETENRIAAILLREAAELRCQAEKEGVHVYLQKPGIRGRPNSRFLTATVRGVQ 55


>ref|XP_002313940.1| predicted protein [Populus trichocarpa] gi|222850348|gb|EEE87895.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/55 (61%), Positives = 41/55 (74%), Gaps = 3/55 (5%)
 Frame = -1

Query: 218 MDLETENQI---LMNEAAELMCQADQEGIHFYLQEQEVRYRPNPHFLAATALGVQ 63
           MDLETEN+I   LM EAAEL  +A++EG+H YL+  +VR RPN  FL AT LGVQ
Sbjct: 52  MDLETENRIAAILMKEAAELRQRAEREGVHVYLERPKVRARPNSRFLTATVLGVQ 106


>ref|XP_002869199.1| AT4g33690/T16L1_180 [Arabidopsis lyrata subsp. lyrata]
           gi|297315035|gb|EFH45458.1| AT4g33690/T16L1_180
           [Arabidopsis lyrata subsp. lyrata]
          Length = 245

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/55 (60%), Positives = 41/55 (74%), Gaps = 3/55 (5%)
 Frame = -1

Query: 218 MDLETENQI---LMNEAAELMCQADQEGIHFYLQEQEVRYRPNPHFLAATALGVQ 63
           MDLETEN+I   L+ EAAEL  QA++EG+  YL++  VR+RPN  FL AT LGVQ
Sbjct: 1   MDLETENRIASILLREAAELRRQAEKEGVRAYLEKPNVRHRPNSRFLTATVLGVQ 55


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