BLASTX nr result
ID: Coptis24_contig00016303
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00016303 (260 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI25085.3| unnamed protein product [Vitis vinifera] 73 3e-11 ref|XP_002272862.1| PREDICTED: uncharacterized protein LOC100266... 69 5e-10 ref|XP_002522053.1| conserved hypothetical protein [Ricinus comm... 68 9e-10 ref|XP_002313940.1| predicted protein [Populus trichocarpa] gi|2... 65 4e-09 ref|XP_002869199.1| AT4g33690/T16L1_180 [Arabidopsis lyrata subs... 64 1e-08 >emb|CBI25085.3| unnamed protein product [Vitis vinifera] Length = 420 Score = 72.8 bits (177), Expect = 3e-11 Identities = 38/57 (66%), Positives = 44/57 (77%), Gaps = 3/57 (5%) Frame = -1 Query: 224 GEMDLETENQI---LMNEAAELMCQADQEGIHFYLQEQEVRYRPNPHFLAATALGVQ 63 GEMDLETEN+I LM EAAEL QA++EG+H YLQ+ +VR RPN FL AT LGVQ Sbjct: 165 GEMDLETENRIAAILMKEAAELRRQAEKEGVHVYLQKPQVRGRPNSRFLTATVLGVQ 221 >ref|XP_002272862.1| PREDICTED: uncharacterized protein LOC100266970 [Vitis vinifera] gi|147815299|emb|CAN61243.1| hypothetical protein VITISV_016134 [Vitis vinifera] Length = 254 Score = 68.6 bits (166), Expect = 5e-10 Identities = 36/55 (65%), Positives = 42/55 (76%), Gaps = 3/55 (5%) Frame = -1 Query: 218 MDLETENQI---LMNEAAELMCQADQEGIHFYLQEQEVRYRPNPHFLAATALGVQ 63 MDLETEN+I LM EAAEL QA++EG+H YLQ+ +VR RPN FL AT LGVQ Sbjct: 1 MDLETENRIAAILMKEAAELRRQAEKEGVHVYLQKPQVRGRPNSRFLTATVLGVQ 55 >ref|XP_002522053.1| conserved hypothetical protein [Ricinus communis] gi|223538652|gb|EEF40253.1| conserved hypothetical protein [Ricinus communis] Length = 252 Score = 67.8 bits (164), Expect = 9e-10 Identities = 34/55 (61%), Positives = 41/55 (74%), Gaps = 3/55 (5%) Frame = -1 Query: 218 MDLETENQI---LMNEAAELMCQADQEGIHFYLQEQEVRYRPNPHFLAATALGVQ 63 MDLETEN+I L+ EAAEL CQA++EG+H YLQ+ +R RPN FL AT GVQ Sbjct: 1 MDLETENRIAAILLREAAELRCQAEKEGVHVYLQKPGIRGRPNSRFLTATVRGVQ 55 >ref|XP_002313940.1| predicted protein [Populus trichocarpa] gi|222850348|gb|EEE87895.1| predicted protein [Populus trichocarpa] Length = 304 Score = 65.5 bits (158), Expect = 4e-09 Identities = 34/55 (61%), Positives = 41/55 (74%), Gaps = 3/55 (5%) Frame = -1 Query: 218 MDLETENQI---LMNEAAELMCQADQEGIHFYLQEQEVRYRPNPHFLAATALGVQ 63 MDLETEN+I LM EAAEL +A++EG+H YL+ +VR RPN FL AT LGVQ Sbjct: 52 MDLETENRIAAILMKEAAELRQRAEREGVHVYLERPKVRARPNSRFLTATVLGVQ 106 >ref|XP_002869199.1| AT4g33690/T16L1_180 [Arabidopsis lyrata subsp. lyrata] gi|297315035|gb|EFH45458.1| AT4g33690/T16L1_180 [Arabidopsis lyrata subsp. lyrata] Length = 245 Score = 63.9 bits (154), Expect = 1e-08 Identities = 33/55 (60%), Positives = 41/55 (74%), Gaps = 3/55 (5%) Frame = -1 Query: 218 MDLETENQI---LMNEAAELMCQADQEGIHFYLQEQEVRYRPNPHFLAATALGVQ 63 MDLETEN+I L+ EAAEL QA++EG+ YL++ VR+RPN FL AT LGVQ Sbjct: 1 MDLETENRIASILLREAAELRRQAEKEGVRAYLEKPNVRHRPNSRFLTATVLGVQ 55