BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016297
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282206.1| PREDICTED: signal recognition particle 43 kD...   152   3e-35
emb|CAN73168.1| hypothetical protein VITISV_027983 [Vitis vinifera]   152   3e-35
ref|XP_003537753.1| PREDICTED: signal recognition particle 43 kD...   148   4e-34
ref|XP_002305542.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_002313685.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33

>ref|XP_002282206.1| PREDICTED: signal recognition particle 43 kDa protein,
           chloroplastic-like [Vitis vinifera]
          Length = 373

 Score =  152 bits (384), Expect = 3e-35
 Identities = 81/142 (57%), Positives = 98/142 (69%)
 Frame = -1

Query: 428 AVDEDGRTALHFVAGLGSEPCVRLLATAGANVNHQEIRGGLXXXXXXXXXXXXXXXXXXX 249
           AVDE+GRTAL F AGLGSE CV++LA AGA++NH++  GG                    
Sbjct: 147 AVDENGRTALLFAAGLGSEACVQILADAGADLNHRDNGGG-------------------- 186

Query: 248 XXXXXXXXXXXXALHMAAGYVRPGVARMLLEFGADPEVEDDKGRTPLDLAREVLLSTPIG 69
                       ALHMAAGYV+PGVAR+L++ GADPE EDD+GRTPLDLARE+L +TP G
Sbjct: 187 ---------GLTALHMAAGYVKPGVARLLIQLGADPEAEDDRGRTPLDLAREMLRATPKG 237

Query: 68  NPMHFARRYGLESVIKVLEEAI 3
           NPM FARR GLE+V++VLEEAI
Sbjct: 238 NPMQFARRLGLENVVRVLEEAI 259


>emb|CAN73168.1| hypothetical protein VITISV_027983 [Vitis vinifera]
          Length = 373

 Score =  152 bits (384), Expect = 3e-35
 Identities = 81/142 (57%), Positives = 98/142 (69%)
 Frame = -1

Query: 428 AVDEDGRTALHFVAGLGSEPCVRLLATAGANVNHQEIRGGLXXXXXXXXXXXXXXXXXXX 249
           AVDE+GRTAL F AGLGSE CV++LA AGA++NH++  GG                    
Sbjct: 147 AVDENGRTALLFAAGLGSEACVQILADAGADLNHRDNGGG-------------------- 186

Query: 248 XXXXXXXXXXXXALHMAAGYVRPGVARMLLEFGADPEVEDDKGRTPLDLAREVLLSTPIG 69
                       ALHMAAGYV+PGVAR+L++ GADPE EDD+GRTPLDLARE+L +TP G
Sbjct: 187 ---------GLTALHMAAGYVKPGVARLLIQLGADPEAEDDRGRTPLDLAREMLRATPKG 237

Query: 68  NPMHFARRYGLESVIKVLEEAI 3
           NPM FARR GLE+V++VLEEAI
Sbjct: 238 NPMQFARRLGLENVVRVLEEAI 259


>ref|XP_003537753.1| PREDICTED: signal recognition particle 43 kDa protein,
           chloroplastic-like [Glycine max]
          Length = 382

 Score =  148 bits (374), Expect = 4e-34
 Identities = 82/142 (57%), Positives = 94/142 (66%)
 Frame = -1

Query: 428 AVDEDGRTALHFVAGLGSEPCVRLLATAGANVNHQEIRGGLXXXXXXXXXXXXXXXXXXX 249
           AVD DGRTAL FVAGLGSE CV+LLA AGAN++H++  GGL                   
Sbjct: 147 AVDADGRTALLFVAGLGSESCVKLLAEAGANLDHRDRSGGLA------------------ 188

Query: 248 XXXXXXXXXXXXALHMAAGYVRPGVARMLLEFGADPEVEDDKGRTPLDLAREVLLSTPIG 69
                       ALHMAAGYVRPGVA++LL+ GADPEV DD+GRT LDLARE+L  TP G
Sbjct: 189 ------------ALHMAAGYVRPGVAKVLLDLGADPEVADDRGRTALDLAREILKVTPKG 236

Query: 68  NPMHFARRYGLESVIKVLEEAI 3
           NPM F RR GLE VI+VLE A+
Sbjct: 237 NPMQFGRRIGLEGVIRVLEGAV 258


>ref|XP_002305542.1| predicted protein [Populus trichocarpa] gi|222848506|gb|EEE86053.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score =  146 bits (368), Expect = 2e-33
 Identities = 77/142 (54%), Positives = 95/142 (66%)
 Frame = -1

Query: 428 AVDEDGRTALHFVAGLGSEPCVRLLATAGANVNHQEIRGGLXXXXXXXXXXXXXXXXXXX 249
           AVD DGRTAL FV+GLGSEPCV+LLA AGA+++H++  GGL                   
Sbjct: 52  AVDSDGRTALLFVSGLGSEPCVKLLAEAGADLDHRDNSGGLT------------------ 93

Query: 248 XXXXXXXXXXXXALHMAAGYVRPGVARMLLEFGADPEVEDDKGRTPLDLAREVLLSTPIG 69
                       ALHMAAGYVRPGV ++L++ GADPEV+DD+G TP DLA+E+L  TP G
Sbjct: 94  ------------ALHMAAGYVRPGVVKLLVDVGADPEVKDDRGLTPFDLAKEILRVTPKG 141

Query: 68  NPMHFARRYGLESVIKVLEEAI 3
           NPM F RR GLES+I++LEE I
Sbjct: 142 NPMQFERRLGLESIIRILEEEI 163


>ref|XP_002313685.1| predicted protein [Populus trichocarpa] gi|222850093|gb|EEE87640.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score =  145 bits (366), Expect = 3e-33
 Identities = 78/142 (54%), Positives = 94/142 (66%)
 Frame = -1

Query: 428 AVDEDGRTALHFVAGLGSEPCVRLLATAGANVNHQEIRGGLXXXXXXXXXXXXXXXXXXX 249
           AVD DGRTAL FV+GLGSEPCV+LLA AGA ++H++  GGL                   
Sbjct: 151 AVDSDGRTALLFVSGLGSEPCVKLLAEAGAELDHRDNSGGLT------------------ 192

Query: 248 XXXXXXXXXXXXALHMAAGYVRPGVARMLLEFGADPEVEDDKGRTPLDLAREVLLSTPIG 69
                       ALHMAAGYV+PGV ++L++ GADPEV+DD+G TPLDLA+E+L  TP G
Sbjct: 193 ------------ALHMAAGYVKPGVVKLLVDLGADPEVKDDRGLTPLDLAKEILRVTPKG 240

Query: 68  NPMHFARRYGLESVIKVLEEAI 3
           NPM F RR GLESVI+ LEE I
Sbjct: 241 NPMQFGRRLGLESVIRNLEEGI 262