BLASTX nr result
ID: Coptis24_contig00016296
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00016296
(1666 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002325714.1| BED finger-nbs-lrr resistance protein [Popul... 262 5e-68
ref|XP_002333023.1| predicted protein [Populus trichocarpa] gi|2... 263 1e-67
ref|XP_002333267.1| BED finger-nbs-lrr resistance protein [Popul... 262 2e-67
gb|ABF81424.1| NBS-LRR type disease resistance protein [Populus ... 262 2e-67
gb|ABF81453.1| NBS-LRR type disease resistance protein [Populus ... 257 7e-66
>ref|XP_002325714.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
gi|222862589|gb|EEF00096.1| BED finger-nbs-lrr resistance
protein [Populus trichocarpa]
Length = 1010
Score = 262 bits (670), Expect(2) = 5e-68
Identities = 180/452 (39%), Positives = 262/452 (57%), Gaps = 25/452 (5%)
Frame = +3
Query: 3 GAMRGKDDIREWRFALKDMRDSTCWVMDMGKVSKCLKFSFDQLGN-EIIKKCFLCCALYP 179
G++R DD+ EWR LK +++S C M+ KV + L+FS+DQL + +++C L CAL+P
Sbjct: 373 GSLRRVDDLHEWRNTLKKLKESKCKDME-DKVFRLLRFSYDQLHDLAALQQCLLFCALFP 431
Query: 180 EDFKIPEGDLIDYWINEALIKE-RSRQDEVDRAQFILNKLRNSCMLESST--LGPRSYVK 350
ED KI LID I+E +I+ SRQ+ VD +LN+L + C+LES+ G SYVK
Sbjct: 432 EDHKIGRKGLIDNLIDEGIIERMESRQEAVDEGHSMLNRLESVCLLESAKKGYGGYSYVK 491
Query: 351 MHDLLRDMALKITDTSQNVLVRAGTKLEEIPDVAEWAENLEKASLMWNEIKAIYS--SPK 524
MHDL+RDMA++ + +V+AG +L E+PD EW ENL + SLM N+I+ I S SP+
Sbjct: 492 MHDLIRDMAIQTLQENSQCMVKAGARLSELPDAEEWTENLTRVSLMQNQIEEIPSTHSPR 551
Query: 525 CPGFSTLLLQQN-PLQSITRDFFVHLLGLRVLDLSETKLEVLPDSISELVNLRVLLLSRC 701
CP STLLL+ N LQ I FF L GL+VLDLS T + LPDS+SELV+L LLL C
Sbjct: 552 CPSLSTLLLRYNSELQFIADSFFEQLHGLKVLDLSYTGITKLPDSVSELVSLTALLLIGC 611
Query: 702 KQLKRIPSVAKLQLLEVLRLDLS---ALTELPEGMEALVNLKILDLWQADLREVPIVLIL 872
K L+ +PS+ KL++L+ RLDLS AL ++P+GME L NL+ L + +E P L+
Sbjct: 612 KMLRHVPSLEKLRVLK--RLDLSGTRALEKIPQGMECLCNLRHLRMNGCGEKEFPSGLLP 669
Query: 873 KFSLLQELCL---------DHLRERESGIT-SVEDLLSLRQMENLTVHFPCLSN---FII 1013
K S LQ L D+ R + + +T +++ LR++E+L HF S+ FI
Sbjct: 670 KLSHLQVFVLEEWIPPGTKDNRRGQPAPLTVKGKEVGCLRKLESLVCHFEGYSDYVEFIK 729
Query: 1014 NSQITKGLNKFNFMVADPNEW-RDMELKMFSLENSYLYWKRLVSVSNKIHRIPDNSLVLP 1190
+ TK L + +V +++ D + + + W L I R ++ P
Sbjct: 730 SRDETKSLTTYQTLVGPLDKYDYDYDDYDYGCRRKTIVWGSL-----SIDRDGGFQVMFP 784
Query: 1191 QNTQYLRIQQFNDLTRFSELSC-LKEARDLRV 1283
++ Q L I +D T ++S +K A DL V
Sbjct: 785 KDIQQLTIDNNDDATSLCDVSSQIKYATDLEV 816
Score = 23.9 bits (50), Expect(2) = 5e-68
Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Frame = +1
Query: 1285 RIIACRKMKYIMSSE------DVTEEQGHLLQHVEMLEIEKCPNVRFLFSSKLFKQFQKL 1446
+I +C M+ ++SS + + ++ C +++ LF L KL
Sbjct: 818 KIFSCNSMESLVSSSWFRSTPPPSPSYNGIFSGLKKFFCSGCSSMKKLFPLVLLPNLVKL 877
Query: 1447 EQVRVIDC 1470
E++ V DC
Sbjct: 878 EEIIVEDC 885
>ref|XP_002333023.1| predicted protein [Populus trichocarpa] gi|222834655|gb|EEE73118.1|
predicted protein [Populus trichocarpa]
Length = 681
Score = 263 bits (672), Expect = 1e-67
Identities = 173/443 (39%), Positives = 257/443 (58%), Gaps = 18/443 (4%)
Frame = +3
Query: 9 MRGKDDIREWRFALKDMRDSTCWVMDMG-KVSKCLKFSFDQLGNEIIKKCFLCCALYPED 185
MRG D+REWR AL+++++S DM +V L+FS++ L + +++CFL CAL+PED
Sbjct: 60 MRGVVDVREWRNALEELKESKVRKDDMEPEVFHILRFSYNHLSDSALQQCFLYCALFPED 119
Query: 186 FKIPEGDLIDYWINEALIKE-RSRQDEVDRAQFILNKLRNSCMLESST--LGPRSYVKMH 356
FKI DL+ Y I+E +IK +SR+ E DR +LN+L+N C+LE + G Y+KMH
Sbjct: 120 FKIRRDDLVAYLIDEGVIKGLKSREAEFDRGHSMLNRLQNVCLLEGAKEGYGNDRYIKMH 179
Query: 357 DLLRDMALKITDTSQNVLVRAGTKLEEIPDVAEWAENLEKASLMWNEIKAIYSS--PKCP 530
DL+RDMA++I + +V+AG +L E+PD EW EN + SLM N I+ I SS P+CP
Sbjct: 180 DLIRDMAIQILQENSQGMVKAGAQLRELPDADEWTENFTRVSLMHNHIQDIPSSHSPRCP 239
Query: 531 GFSTLLLQQNP-LQSITRDFFVHLLGLRVLDLSETKLEVLPDSISELVNLRVLLLSRCKQ 707
STLLL +N L+ I FF L GL+VLDLS T + LPDS+SELVNL LLL C
Sbjct: 240 SLSTLLLCENSELKFIADSFFEQLRGLKVLDLSYTNITKLPDSVSELVNLTALLLIGCHM 299
Query: 708 LKRIPSVAKLQLLEVLRLDLS---ALTELPEGMEALVNLKILDLWQADLREVPIVLILKF 878
L+ +PS+ KL+ L RLDLS AL ++P+GME L NL+ L + +E P L+ K
Sbjct: 300 LRHVPSLEKLRALR--RLDLSGTWALEKMPQGMECLCNLRYLRMNGCGEKEFPSGLLPKL 357
Query: 879 SLLQELCLDHLRERESGITSV----EDLLSLRQMENLTVHFPCLSNFI--INSQ-ITKGL 1037
S LQ L ++R + +++ LR++E+L HF S+F+ + SQ T+ L
Sbjct: 358 SHLQVFELKSAKDRGGQYAPITVKGKEVACLRKLESLGCHFEGYSDFVEYLKSQDETQSL 417
Query: 1038 NKFNFMVADPNEWRDMELKMFSLENSYLYWKRLVSVSNKIHRIPDNSLVLPQNTQYLRIQ 1217
+K+ +V + + S+ K + + ++R D + P++ Q L I
Sbjct: 418 SKYQIVVG-----------LLDINFSFQRSKAVFLDNLSVNRDGDFQDMFPKDIQQLIID 466
Query: 1218 QFNDLTRFSEL-SCLKEARDLRV 1283
+ D T ++ S +K L +
Sbjct: 467 KCEDATSLCDIFSLIKYTTQLEI 489
>ref|XP_002333267.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
gi|222835868|gb|EEE74289.1| BED finger-nbs-lrr resistance
protein [Populus trichocarpa]
Length = 1077
Score = 262 bits (670), Expect = 2e-67
Identities = 183/457 (40%), Positives = 264/457 (57%), Gaps = 32/457 (7%)
Frame = +3
Query: 3 GAMRGKDDIREWRFALKDMRDSTCWVMDMGK-VSKCLKFSFDQLGNEIIKKCFLCCALYP 179
G MRG DDI EWR AL++++ S + DM + V + L+FS+ L +++CFL CAL+P
Sbjct: 439 GTMRGVDDICEWRNALEELKQSRVRLEDMDEEVFQILRFSYMHLKESALQQCFLHCALFP 498
Query: 180 EDFKIPEGDLIDYWINEALIKERSRQD-EVDRAQFILNKLRNSCMLESSTL--GPRSY-- 344
EDF IP DLI Y I+E +IK +R++ E D+ +LNKL ++C+LE + L G R
Sbjct: 499 EDFMIPREDLIAYLIDEGVIKGLTRREAEFDKGHTMLNKLESACLLEDAKLYSGRRCVRA 558
Query: 345 VKMHDLLRDMALKITDTSQNVLVRAGTKLEEIPDVAEWAENLEKASLMWNEIKAI--YSS 518
VKMHDL+RDMA++I + +V+AG +L E+P EW ENL + SLM N+IK I S
Sbjct: 559 VKMHDLIRDMAIQILQENSQGMVKAGAQLRELPGAEEWTENLTRVSLMQNQIKEIPFSHS 618
Query: 519 PKCPGFSTLLLQQNP-LQSITRDFFVHLLGLRVLDLSETKLEVLPDSISELVNLRVLLLS 695
P+CP STLLL +NP LQ I FF L GL+VLDLS T + LPDS+SELV+L LLL
Sbjct: 619 PRCPSLSTLLLCRNPKLQFIADSFFEQLHGLKVLDLSYTGITKLPDSVSELVSLTALLLI 678
Query: 696 RCKQLKRIPSVAKLQLLEVLRLDLS---ALTELPEGMEALVNLKILDLWQADLREVPIVL 866
CK L+ +PS+ KL+ L+ RLDLS AL ++P+GME L NL+ L + +E P L
Sbjct: 679 DCKMLRHVPSLEKLRALK--RLDLSGTWALEKIPQGMECLCNLRYLIMNGCGEKEFPSGL 736
Query: 867 ILKFSLLQELCLDH--------LRERESGITSV--EDLLSLRQMENLTVHFPCLSNFI-- 1010
+ K S LQ L+ RER+ +V +++ LR++E+L HF S+++
Sbjct: 737 LPKLSHLQVFVLEEWIPRPTGDYRERQDAPITVKGKEVGCLRKLESLACHFEGCSDYMEY 796
Query: 1011 INSQ-ITKGLNKFNFMVADPNEWRDMELKMFSLENSYLYW------KRLVSVSNKIHRIP 1169
+ SQ TK L + +V +++ + Y Y K +V + I R
Sbjct: 797 LKSQDETKSLTTYQILVGPLDKY----------DYCYCYGYDGCRRKAIVRGNLSIDRDG 846
Query: 1170 DNSLVLPQNTQYLRIQQFNDLTRFSE-LSCLKEARDL 1277
++ P++ Q L I +D T + LS +K +L
Sbjct: 847 GFQVMFPKDIQQLSIHNNDDATSLCDFLSLIKSVTEL 883
>gb|ABF81424.1| NBS-LRR type disease resistance protein [Populus trichocarpa]
Length = 1183
Score = 262 bits (670), Expect = 2e-67
Identities = 183/457 (40%), Positives = 264/457 (57%), Gaps = 32/457 (7%)
Frame = +3
Query: 3 GAMRGKDDIREWRFALKDMRDSTCWVMDMGK-VSKCLKFSFDQLGNEIIKKCFLCCALYP 179
G MRG DDI EWR AL++++ S + DM + V + L+FS+ L +++CFL CAL+P
Sbjct: 519 GTMRGVDDICEWRNALEELKQSRVRLEDMDEEVFQILRFSYMHLKESALQQCFLHCALFP 578
Query: 180 EDFKIPEGDLIDYWINEALIKERSRQD-EVDRAQFILNKLRNSCMLESSTL--GPRSY-- 344
EDF IP DLI Y I+E +IK +R++ E D+ +LNKL ++C+LE + L G R
Sbjct: 579 EDFMIPREDLIAYLIDEGVIKGLTRREAEFDKGHTMLNKLESACLLEDAKLYSGRRCVRA 638
Query: 345 VKMHDLLRDMALKITDTSQNVLVRAGTKLEEIPDVAEWAENLEKASLMWNEIKAI--YSS 518
VKMHDL+RDMA++I + +V+AG +L E+P EW ENL + SLM N+IK I S
Sbjct: 639 VKMHDLIRDMAIQILQENSQGMVKAGAQLRELPGAEEWTENLTRVSLMQNQIKEIPFSHS 698
Query: 519 PKCPGFSTLLLQQNP-LQSITRDFFVHLLGLRVLDLSETKLEVLPDSISELVNLRVLLLS 695
P+CP STLLL +NP LQ I FF L GL+VLDLS T + LPDS+SELV+L LLL
Sbjct: 699 PRCPSLSTLLLCRNPKLQFIADSFFEQLHGLKVLDLSYTGITKLPDSVSELVSLTALLLI 758
Query: 696 RCKQLKRIPSVAKLQLLEVLRLDLS---ALTELPEGMEALVNLKILDLWQADLREVPIVL 866
CK L+ +PS+ KL+ L+ RLDLS AL ++P+GME L NL+ L + +E P L
Sbjct: 759 DCKMLRHVPSLEKLRALK--RLDLSGTWALEKIPQGMECLCNLRYLIMNGCGEKEFPSGL 816
Query: 867 ILKFSLLQELCLDH--------LRERESGITSV--EDLLSLRQMENLTVHFPCLSNFI-- 1010
+ K S LQ L+ RER+ +V +++ LR++E+L HF S+++
Sbjct: 817 LPKLSHLQVFVLEEWIPRPTGDYRERQDAPITVKGKEVGCLRKLESLACHFEGCSDYMEY 876
Query: 1011 INSQ-ITKGLNKFNFMVADPNEWRDMELKMFSLENSYLYW------KRLVSVSNKIHRIP 1169
+ SQ TK L + +V +++ + Y Y K +V + I R
Sbjct: 877 LKSQDETKSLTTYQILVGPLDKY----------DYCYCYGYDGCRRKAIVRGNLSIDRDG 926
Query: 1170 DNSLVLPQNTQYLRIQQFNDLTRFSE-LSCLKEARDL 1277
++ P++ Q L I +D T + LS +K +L
Sbjct: 927 GFQVMFPKDIQQLSIHNNDDATSLCDFLSLIKSVTEL 963
>gb|ABF81453.1| NBS-LRR type disease resistance protein [Populus trichocarpa]
Length = 1324
Score = 257 bits (656), Expect = 7e-66
Identities = 153/340 (45%), Positives = 217/340 (63%), Gaps = 6/340 (1%)
Frame = +3
Query: 6 AMRGKDDIREWRFALKDMRDSTCWVMDMGKVSKCLKFSFDQLGNEIIKKCFLCCALYPED 185
++RG DD+ EWR ALK +R+S +V K L+FS+D+LG+ +++C L CAL+PED
Sbjct: 542 SLRGVDDLHEWRNALKKLRESE---FRDNEVFKLLRFSYDRLGDLALQQCLLYCALFPED 598
Query: 186 FKIPEGDLIDYWINEALIKE-RSRQDEVDRAQFILNKLRNSCMLESSTLGPRSYVKMHDL 362
+I LI Y I+E +IK RSR+D D +LNKL C+LES+ + ++VKMHDL
Sbjct: 599 CEIEREMLIGYLIDEGIIKGMRSRKDAFDEGHTMLNKLERVCLLESAQM---THVKMHDL 655
Query: 363 LRDMALKITDTSQNVLVRAGTKLEEIPDVAEWAENLEKASLMWNEIKAIYSS--PKCPGF 536
+RDM + I + V+V+AG +L+E+PD EW ENL + SLM N+IKAI SS P+CP
Sbjct: 656 IRDMTIHILLENSQVMVKAGAQLKELPDAEEWTENLTRVSLMQNQIKAIPSSHSPRCPYL 715
Query: 537 STLLLQQNPLQSITRD-FFVHLLGLRVLDLSETKLEVLPDSISELVNLRVLLLSRCKQLK 713
STLLL QN L D FF L GL+VLDL+ T +E L DSIS+L++L LLL+ CK+L+
Sbjct: 716 STLLLCQNRLLGFIADSFFKQLHGLKVLDLTWTGIEKLSDSISDLLSLTTLLLNNCKKLR 775
Query: 714 RIPSVAKLQLLEVLRLDLSALTELPEGMEALVNLKILDLWQADLREVPIVLILKFSLLQE 893
+PS+ KL+ L+ L L +AL ++P+GME L NL+ L + +E P ++ K S LQ
Sbjct: 776 HVPSLKKLRALKRLDLSHTALEKMPQGMECLTNLRYLRMNGCGEKEFPSGILPKLSHLQV 835
Query: 894 LCLDH--LRERESGITSVEDLLSLRQMENLTVHFPCLSNF 1007
L+ + V+++ SLR +E L HF LS+F
Sbjct: 836 FVLEECFVDSYRRITVEVKEVGSLRNLETLRCHFKGLSDF 875