BLASTX nr result

ID: Coptis24_contig00016295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016295
         (1477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265272.1| PREDICTED: uncharacterized protein LOC100243...   344   3e-92
emb|CBI32121.3| unnamed protein product [Vitis vinifera]              308   3e-81
ref|XP_002521025.1| conserved hypothetical protein [Ricinus comm...   273   8e-71
gb|AFK40701.1| unknown [Medicago truncatula]                          266   1e-68
emb|CAN69795.1| hypothetical protein VITISV_022545 [Vitis vinifera]   251   4e-64

>ref|XP_002265272.1| PREDICTED: uncharacterized protein LOC100243227 [Vitis vinifera]
          Length = 438

 Score =  344 bits (883), Expect = 3e-92
 Identities = 200/427 (46%), Positives = 269/427 (62%), Gaps = 39/427 (9%)
 Frame = +1

Query: 103  SAQLILEQGYTVSTVLNANKLPHPINPSSLLPTLNNAGGTHSVFVLDSPSSVFYTVPFPI 282
            SA L+LE GYTV TV + NKL   INP S+LP      G+    +LDS  SVFYTV  P+
Sbjct: 25   SADLVLEDGYTVRTVFDGNKLE--INPHSILPRY----GSSDFIILDSSKSVFYTVSSPL 78

Query: 283  SQDGDVRRYAGNGSAGFVDGELSFAKFDRPRSFAVDFKGNVYVADKSNHAIRKISKSGVT 462
            SQ+ +++R +G+ SAGF DG+ + A F +PRSFAVD KGNVYVAD+SN  IRKI+  GVT
Sbjct: 79   SQESEIKRLSGS-SAGFSDGDSASATFSKPRSFAVDLKGNVYVADQSNGVIRKITNRGVT 137

Query: 463  T-IAGGHSRKPGNVDGPAQNASFSEDFELVFVPGVCALLITDRGNRLVRQMNLKPNDCKS 639
            T IAGG+++K G VDGPAQNASFS+DFELVFVP  CA+L++DRG++LVRQ++LK  DC+ 
Sbjct: 138  TTIAGGYAQKTGKVDGPAQNASFSKDFELVFVPEKCAVLVSDRGSQLVRQIDLKVEDCRR 197

Query: 640  GSYWQLGSTGSIW----LGVICFILGSIITLVVAFVAYPFIISCEIIGYHWFSETWKHCQ 807
                 LG    +W    LGV C     ++  +V  ++ P++I  E+    +FSETWKHC 
Sbjct: 198  SPQSVLGGA-FLWVLLGLGVSC-----LVGFIVGIISRPYVIPQEVFCPLFFSETWKHCL 251

Query: 808  INLERQVVIVCSDIKSVVVS--FYFLVGRLVRMSLSQLSLMFRIPRVEKQFLCREPSSLF 981
            I+L +QV+++C DI+SV+ S  FY L+ RL+ +SLS LSLMFRI  VE QF  +E  SL 
Sbjct: 252  IHLGKQVLMLCFDIRSVIASSMFYALLRRLISLSLSHLSLMFRINIVESQFSRKESVSLL 311

Query: 982  SMDGAVNHEITKPQIYADQLKDMMSFDEDL------------------------------ 1071
              D +   E T PQ++ DQLKD+ SFD  L                              
Sbjct: 312  DSDDSCISEPTIPQMFEDQLKDLASFDRSLQLPDTSSKIFMQKKSHRFADQLEDLLTFDG 371

Query: 1072 --DVSEETDKTFKQGDEDHDKSDVSTSSNGAIDAAIHANFVEFANQARQKHPMDGPFVGN 1245
              ++S  TD+ FK+GD+D  K D+S  + G I++ I ANF+ F  QA+   P++    GN
Sbjct: 372  SSELSNTTDRIFKEGDDDQGKRDISPETCGRIESMIEANFMGFVEQAKVTTPVELCSSGN 431

Query: 1246 SGLVKRK 1266
            +GLVKR+
Sbjct: 432  TGLVKRR 438


>emb|CBI32121.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score =  308 bits (788), Expect = 3e-81
 Identities = 173/342 (50%), Positives = 232/342 (67%), Gaps = 7/342 (2%)
 Frame = +1

Query: 103  SAQLILEQGYTVSTVLNANKLPHPINPSSLLPTLNNAGGTHSVFVLDSPSSVFYTVPFPI 282
            SA L+LE GYTV TV + NKL   INP S+LP      G+    +LDS  SVFYTV  P+
Sbjct: 25   SADLVLEDGYTVRTVFDGNKLE--INPHSILPRY----GSSDFIILDSSKSVFYTVSSPL 78

Query: 283  SQDGDVRRYAGNGSAGFVDGELSFAKFDRPRSFAVDFKGNVYVADKSNHAIRKISKSGVT 462
            SQ+ +++R +G+ SAGF DG+ + A F +PRSFAVD KGNVYVAD+SN  IRKI+  GVT
Sbjct: 79   SQESEIKRLSGS-SAGFSDGDSASATFSKPRSFAVDLKGNVYVADQSNGVIRKITNRGVT 137

Query: 463  T-IAGGHSRKPGNVDGPAQNASFSEDFELVFVPGVCALLITDRGNRLVRQMNLKPNDCKS 639
            T IAGG+++K G VDGPAQNASFS+DFELVFVP  CA+L++DRG++LVRQ++LK  DC+ 
Sbjct: 138  TTIAGGYAQKTGKVDGPAQNASFSKDFELVFVPEKCAVLVSDRGSQLVRQIDLKVEDCRR 197

Query: 640  GSYWQLGSTGSIW----LGVICFILGSIITLVVAFVAYPFIISCEIIGYHWFSETWKHCQ 807
                 LG    +W    LGV C     ++  +V  ++ P++I  E+    +FSETWKHC 
Sbjct: 198  SPQSVLGG-AFLWVLLGLGVSC-----LVGFIVGIISRPYVIPQEVFCPLFFSETWKHCL 251

Query: 808  INLERQVVIVCSDIKSVVVS--FYFLVGRLVRMSLSQLSLMFRIPRVEKQFLCREPSSLF 981
            I+L +QV+++C DI+SV+ S  FY L+ RL+ +SLS LSLMFRI  VE QF  +E  SL 
Sbjct: 252  IHLGKQVLMLCFDIRSVIASSMFYALLRRLISLSLSHLSLMFRINIVESQFSRKESVSLL 311

Query: 982  SMDGAVNHEITKPQIYADQLKDMMSFDEDLDVSEETDKTFKQ 1107
              D +   E T PQ++ DQLKD+ SFD  L + + +  + K+
Sbjct: 312  DSDDSCISEPTIPQMFEDQLKDLASFDRSLQLPDTSKSSRKE 353


>ref|XP_002521025.1| conserved hypothetical protein [Ricinus communis]
            gi|223539862|gb|EEF41442.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 408

 Score =  273 bits (698), Expect = 8e-71
 Identities = 166/386 (43%), Positives = 234/386 (60%), Gaps = 10/386 (2%)
 Frame = +1

Query: 112  LILEQGYTVSTVLNANKLPHPINPSSLLPTLNNAGGTHSVFVLDSPSSVFYTVPFPISQD 291
            LILE GYTV+T+++ +KL   INP ++L    ++     + +LDS  S  YT+ FPISQ+
Sbjct: 30   LILEDGYTVTTIIDGHKLE--INPHAVLSRPQSS----DLILLDSSHSTIYTISFPISQE 83

Query: 292  GDVRRYAGNGSAGFVDGELSFAKFDRPRSFAVDFKGNVYVADKSNHAIRKISKSGVTTIA 471
              V+R +G+G AG  DGE   A+F++PRSFAVD KGN+YVAD+ N  IRKI+ SGV+TIA
Sbjct: 84   SVVKRLSGDGVAGLSDGEPGSARFNKPRSFAVDNKGNIYVADRLNGTIRKITNSGVSTIA 143

Query: 472  GGHSRKPGNVDGPAQNASFSEDFELVFVPGVCALLITDRGNRLVRQMNLKPNDCKSGSYW 651
            GG+S+  G  DGPAQNA+FS DFE+ FV   CALLI+D GN+LVR++ LKP+DC + S+ 
Sbjct: 144  GGYSKGFGREDGPAQNATFSSDFEVAFVAEECALLISDHGNQLVRRLPLKPDDCATASHS 203

Query: 652  QLGSTGSIWLGVICFILGSIITLVVAFVAYPFIISCEIIGYHWFSETWKHCQINLERQVV 831
             LG+  S W+  +  ++  +I + + FV  P I+  E       SETW+ C INL +QV+
Sbjct: 204  ALGAV-SFWVLGLGLVMSCLIGIAIGFVIRPHIVPYEGSNPSRCSETWRLCLINLAKQVL 262

Query: 832  IVCSDIKSVVV--SFYFLVGRLVRMSLSQLSLMFRIPRVEKQFLCREPSSLFS------- 984
            + C DI+S +   S Y L+ RL+ +SLS LSLMFRI  V  Q L +   S  S       
Sbjct: 263  MFCFDIRSAIARSSPYTLMSRLLWLSLSHLSLMFRINTVGSQTLSKGVDSQTSSKGFVSL 322

Query: 985  MDGAVNHEITKPQIYADQLKDMMSFDEDLDVSEETDKTFKQGDEDHDKSDVSTSSNGAID 1164
            +D  VN   T+      +LKD++S +   +   E   T   G++D   +DV    N  ID
Sbjct: 323  LDSDVNSFETETSQLCAELKDLISLNGPSNSKGEISNT---GEQDQLGNDVLLDGNPRID 379

Query: 1165 AAIHANFVEFANQARQ-KHPMDGPFV 1239
              I  N + FA  A++   P++G  V
Sbjct: 380  TMIQENIMGFAKVAQETTTPLNGTLV 405


>gb|AFK40701.1| unknown [Medicago truncatula]
          Length = 384

 Score =  266 bits (680), Expect = 1e-68
 Identities = 161/339 (47%), Positives = 211/339 (62%), Gaps = 7/339 (2%)
 Frame = +1

Query: 115  ILEQGYTVSTVLNANKLPHPINPSSLLPTLNNAGGTHSVFVLDSPSSVFYTVPFPISQDG 294
            I E+GYT++T+L+ +KL   INP S+L    ++     + VLDS +S FYTV  PISQ+ 
Sbjct: 29   IPEEGYTITTILDGHKLH--INPFSILQRPISS----DLIVLDSTNSTFYTVQLPISQES 82

Query: 295  DVRRYAGNGSAGFVDGELSFAKFDRPRSFAVDFKGNVYVADKSNHAIRKISKSGVTTIAG 474
              +R++GNGS G+ DG++  A+FD+PRSFAVDF+GNVYVAD+ N  IRKIS +GVTTIAG
Sbjct: 83   VFKRFSGNGSPGYEDGDVGLARFDKPRSFAVDFRGNVYVADRVNKVIRKISTNGVTTIAG 142

Query: 475  GHSRKPGNVDGPAQNASFSEDFELVFVPGVCALLITDRGNRLVRQMNLKPNDCKSGSYWQ 654
            G S K    DGP QNASFS DFEL F+P +CALL++D  ++LV Q+NLK  DC  GS   
Sbjct: 143  GSSEKSSIKDGPVQNASFSNDFELTFIPALCALLVSDHMHQLVHQINLKGEDCTLGSKSA 202

Query: 655  LGS--TGSIWLGVICFILGSIITLVVAFVAYPFIISCEIIGYHWFSETWKHCQINLERQV 828
            LG+  T ++ LG+ C     I+ LV+  V  P+II  E      F+ T KHCQ NL + V
Sbjct: 203  LGAVMTWTLGLGLSC-----ILGLVIGIVIRPYIIPHEHTSRCHFTATRKHCQTNLVKLV 257

Query: 829  VIVCSDIKSVVV-----SFYFLVGRLVRMSLSQLSLMFRIPRVEKQFLCREPSSLFSMDG 993
              + S IKS V      S + +  RL  +SLS L LMF I  V  +    E  SL  +D 
Sbjct: 258  PTLYSGIKSAVASCGCSSVFTVAVRLWELSLSLLVLMFNIDFVSPRRPHLESVSLLDLDA 317

Query: 994  AVNHEITKPQIYADQLKDMMSFDEDLDVSEETDKTFKQG 1110
              + EI+K   Y DQLKD+MSFDE L   + T +   QG
Sbjct: 318  YNSGEISKSSKYFDQLKDLMSFDEHL--MDSTKEALNQG 354


>emb|CAN69795.1| hypothetical protein VITISV_022545 [Vitis vinifera]
          Length = 459

 Score =  251 bits (640), Expect = 4e-64
 Identities = 167/425 (39%), Positives = 230/425 (54%), Gaps = 37/425 (8%)
 Frame = +1

Query: 103  SAQLILEQGYTVSTVLNANKLPHPINPSSLLPTLNNAGGTHSVFVLDSPSSVFYTVPFPI 282
            SA L+LE GYTV TV + NKL   INP S+LP      G+    +LDS  SVFYTV  P+
Sbjct: 25   SADLVLEDGYTVRTVFDGNKLE--INPHSILPRY----GSSDFIILDSSKSVFYTVXSPL 78

Query: 283  SQDGDVRRYAGNGSAGFVDGELSFAKFDRPRSFAVDFKGNVYVADKSNHAIRKISKSGVT 462
            SQ+ ++ R +G+ SAGF DG+ + A F +PRSFAVD KGNVYVAD+SN  IRKI+  GVT
Sbjct: 79   SQESEINRLSGS-SAGFSDGDSASAMFSKPRSFAVDLKGNVYVADQSNGVIRKITNRGVT 137

Query: 463  T-IAGGHSRKPGNVDGPAQNASFSEDFELVFVPGVCALLITDRGNRLVRQMNLKPNDCKS 639
            T IAGG+++K G VDGPAQNASFS+DFELVFVP  CA+L++DRG++LVRQ++LK  DC+ 
Sbjct: 138  TTIAGGYAQKTGKVDGPAQNASFSKDFELVFVPEKCAVLVSDRGSQLVRQIDLKVEDCRR 197

Query: 640  GSYWQLGSTGSIW----LGVICFILGSIITLVVAFVAYPFIISCEIIGYHWFSETWKHCQ 807
                 LG    +W    LGV C     ++  +V  ++ P++I            T     
Sbjct: 198  SPQSVLGG-AFLWVLLGLGVSC-----LVGFIVGIISRPYVI----------PHTGSLLP 241

Query: 808  INLERQVVIVCSDIKSVVVSFYFLVGRLVRMSLSQLSLMFRIPRVEKQFLCREPSSLFSM 987
               +R V  + +       S       L+R             + + QF  +E  SL   
Sbjct: 242  TLFQRDVEALPNP------SGETSTDALLR------------HQKQSQFSRKESVSLLDS 283

Query: 988  DGAVNHEITKPQIYADQLKDMMSFDEDL-------------------------------- 1071
            D +   E T PQ++ DQLKD+ SFD  L                                
Sbjct: 284  DDSCISEPTIPQMFEDQLKDLASFDRSLQLPDTSSKIXMQKKSHRFADQLEDLXTFDGSS 343

Query: 1072 DVSEETDKTFKQGDEDHDKSDVSTSSNGAIDAAIHANFVEFANQARQKHPMDGPFVGNSG 1251
            ++S  TD+ FK+GD+D  K D+S  + G I++ I ANF+ F  QA+   P++    GN+G
Sbjct: 344  ELSNXTDRIFKEGDDDQGKRDISPETCGRIESMIEANFMGFVEQAKVTTPVELCSSGNTG 403

Query: 1252 LVKRK 1266
            +  R+
Sbjct: 404  VGGRR 408


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