BLASTX nr result

ID: Coptis24_contig00016290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016290
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521428.1| beta-galactosidase, putative [Ricinus commun...   261   3e-68
ref|XP_002317239.1| predicted protein [Populus trichocarpa] gi|2...   252   2e-65
ref|XP_002268994.2| PREDICTED: beta-galactosidase 6-like, partia...   246   1e-63
emb|CBI23471.3| unnamed protein product [Vitis vinifera]              246   1e-63
ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula] gi|...   238   5e-61

>ref|XP_002521428.1| beta-galactosidase, putative [Ricinus communis]
           gi|223539327|gb|EEF40918.1| beta-galactosidase, putative
           [Ricinus communis]
          Length = 841

 Score =  261 bits (668), Expect = 3e-68
 Identities = 121/136 (88%), Positives = 128/136 (94%)
 Frame = -3

Query: 410 VSYDHRAIVIDGHRRVLLSGSIHYPRSTPEVWPELIRKSKEGGLDVIETYVFWNYHEPVK 231
           VSYDHRA+VIDG RRVL SGSIHYPR+TPEVWP++IRKSKEGGLDVIETYVFWNYHEPVK
Sbjct: 30  VSYDHRALVIDGKRRVLQSGSIHYPRTTPEVWPDIIRKSKEGGLDVIETYVFWNYHEPVK 89

Query: 230 GQYYFEDRFDLVKFVKTVQEAGLFVHLRIGPYACAEWNYGGFPLWLHFIPRIQFRTTNTP 51
           GQYYFE RFDLV+FVKT+QEAGL VHLRIGPYACAEWNYGGFPLWLHFIP IQFRTTN  
Sbjct: 90  GQYYFEGRFDLVRFVKTIQEAGLLVHLRIGPYACAEWNYGGFPLWLHFIPGIQFRTTNEL 149

Query: 50  FKIEMELFLTKIVNMM 3
           FK EM+LFLTKIVNMM
Sbjct: 150 FKEEMKLFLTKIVNMM 165


>ref|XP_002317239.1| predicted protein [Populus trichocarpa] gi|222860304|gb|EEE97851.1|
           predicted protein [Populus trichocarpa]
          Length = 849

 Score =  252 bits (644), Expect = 2e-65
 Identities = 115/136 (84%), Positives = 127/136 (93%)
 Frame = -3

Query: 410 VSYDHRAIVIDGHRRVLLSGSIHYPRSTPEVWPELIRKSKEGGLDVIETYVFWNYHEPVK 231
           V+YDH+A+VIDG RRVL SGSIHYPR+TPEVWPE+IRKSKEGGLDVIETYVFWNYHEPV+
Sbjct: 36  VTYDHKALVIDGKRRVLQSGSIHYPRTTPEVWPEIIRKSKEGGLDVIETYVFWNYHEPVR 95

Query: 230 GQYYFEDRFDLVKFVKTVQEAGLFVHLRIGPYACAEWNYGGFPLWLHFIPRIQFRTTNTP 51
           GQYYFE RFDLV+FVKTVQEAGLFVHLRIGPYACAEWNYGGFPLWLHFIP +QFRT+N  
Sbjct: 96  GQYYFEGRFDLVRFVKTVQEAGLFVHLRIGPYACAEWNYGGFPLWLHFIPGVQFRTSNDI 155

Query: 50  FKIEMELFLTKIVNMM 3
           FK  M+ FLTKIV++M
Sbjct: 156 FKNAMKSFLTKIVDLM 171


>ref|XP_002268994.2| PREDICTED: beta-galactosidase 6-like, partial [Vitis vinifera]
          Length = 177

 Score =  246 bits (629), Expect = 1e-63
 Identities = 114/136 (83%), Positives = 124/136 (91%)
 Frame = -3

Query: 410 VSYDHRAIVIDGHRRVLLSGSIHYPRSTPEVWPELIRKSKEGGLDVIETYVFWNYHEPVK 231
           V+YDHRA+VIDG RRVL SGSIHYPRS PEVWPE+IRKSKEGGLDVIETYVFWN HEPV+
Sbjct: 25  VTYDHRALVIDGKRRVLQSGSIHYPRSMPEVWPEIIRKSKEGGLDVIETYVFWNNHEPVR 84

Query: 230 GQYYFEDRFDLVKFVKTVQEAGLFVHLRIGPYACAEWNYGGFPLWLHFIPRIQFRTTNTP 51
           G+YYFE RFDLV+FVKTVQEAGL VHLRIGPYACAEWNYGGFP+WLHFIP IQFRTTN  
Sbjct: 85  GEYYFEGRFDLVRFVKTVQEAGLLVHLRIGPYACAEWNYGGFPVWLHFIPGIQFRTTNDL 144

Query: 50  FKIEMELFLTKIVNMM 3
           FK EM+ FL KIV++M
Sbjct: 145 FKNEMKRFLAKIVSLM 160


>emb|CBI23471.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score =  246 bits (629), Expect = 1e-63
 Identities = 114/136 (83%), Positives = 124/136 (91%)
 Frame = -3

Query: 410 VSYDHRAIVIDGHRRVLLSGSIHYPRSTPEVWPELIRKSKEGGLDVIETYVFWNYHEPVK 231
           V+YDHRA+VIDG RRVL SGSIHYPRS PEVWPE+IRKSKEGGLDVIETYVFWN HEPV+
Sbjct: 160 VTYDHRALVIDGKRRVLQSGSIHYPRSMPEVWPEIIRKSKEGGLDVIETYVFWNNHEPVR 219

Query: 230 GQYYFEDRFDLVKFVKTVQEAGLFVHLRIGPYACAEWNYGGFPLWLHFIPRIQFRTTNTP 51
           G+YYFE RFDLV+FVKTVQEAGL VHLRIGPYACAEWNYGGFP+WLHFIP IQFRTTN  
Sbjct: 220 GEYYFEGRFDLVRFVKTVQEAGLLVHLRIGPYACAEWNYGGFPVWLHFIPGIQFRTTNDL 279

Query: 50  FKIEMELFLTKIVNMM 3
           FK EM+ FL KIV++M
Sbjct: 280 FKNEMKRFLAKIVSLM 295


>ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula]
           gi|355486266|gb|AES67469.1| Beta-galactosidase [Medicago
           truncatula]
          Length = 2260

 Score =  238 bits (606), Expect = 5e-61
 Identities = 107/136 (78%), Positives = 122/136 (89%)
 Frame = -3

Query: 410 VSYDHRAIVIDGHRRVLLSGSIHYPRSTPEVWPELIRKSKEGGLDVIETYVFWNYHEPVK 231
           V YDHRA+VIDG RRVL+SGSIHYPRSTP++WP+LI+KSK+GGLDVIETYVFWN HEPVK
Sbjct: 22  VDYDHRALVIDGKRRVLISGSIHYPRSTPQMWPDLIQKSKDGGLDVIETYVFWNLHEPVK 81

Query: 230 GQYYFEDRFDLVKFVKTVQEAGLFVHLRIGPYACAEWNYGGFPLWLHFIPRIQFRTTNTP 51
           GQY F+ R DLVKFVK V EAGL+VHLRIGPY C+EWNYGGFPLWLHFIP I+FRT N P
Sbjct: 82  GQYDFDGRKDLVKFVKAVAEAGLYVHLRIGPYVCSEWNYGGFPLWLHFIPGIKFRTDNEP 141

Query: 50  FKIEMELFLTKIVNMM 3
           FK+EM+ F TKIV++M
Sbjct: 142 FKVEMKRFTTKIVDLM 157


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