BLASTX nr result

ID: Coptis24_contig00016289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016289
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273074.1| PREDICTED: phospho-N-acetylmuramoyl-pentapep...   238   7e-61
ref|XP_002532536.1| phospho-n-acetylmuramoyl-pentapeptide-transf...   238   9e-61
ref|XP_002316728.1| predicted protein [Populus trichocarpa] gi|2...   226   2e-57
emb|CBI30860.3| unnamed protein product [Vitis vinifera]              219   4e-55
ref|XP_004147410.1| PREDICTED: phospho-N-acetylmuramoyl-pentapep...   218   6e-55

>ref|XP_002273074.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase
           homolog [Vitis vinifera]
          Length = 545

 Score =  238 bits (607), Expect = 7e-61
 Identities = 124/194 (63%), Positives = 136/194 (70%)
 Frame = -1

Query: 608 KMLVPLPAPXXXXXXXXXXXXLTSFCFVSMGNGINXXXXXXXXXXXXXXXAFIGMSIAVL 429
           KMLVPLPAP            LT+FCFVSMGNG+N               AFIGMSI+VL
Sbjct: 352 KMLVPLPAPLGLVCLGKYYLFLTTFCFVSMGNGVNLTDGLDGLAGGTAALAFIGMSISVL 411

Query: 428 PISSDLSIFGVSMAGACIGFLLHNRYKASVFMGDTXXXXXXXXXXXXXACTGMFFPLFIA 249
           PI  DL++FG SMAGAC GFLLHNRYKASVFMGDT             ACTGMFFPLFI+
Sbjct: 412 PICPDLAVFGASMAGACFGFLLHNRYKASVFMGDTGSLALGGALAAMAACTGMFFPLFIS 471

Query: 248 SGVFVIEALSVIVQVFYFKTTKCFYGVGLRLFRMAPLHHHFELCGFKEPHIVACTYVVSC 69
           SG+FV+E +SVI+QV YFKTTK F G G RLFRMAP HHH ELCG KEP IVA  YV+SC
Sbjct: 472 SGIFVLETVSVIMQVSYFKTTKFFQGAGRRLFRMAPFHHHLELCGLKEPIIVAGAYVISC 531

Query: 68  ILAIYAGYVGLISA 27
            LA+ AGYVGLISA
Sbjct: 532 WLAVVAGYVGLISA 545


>ref|XP_002532536.1| phospho-n-acetylmuramoyl-pentapeptide-transferase, putative
           [Ricinus communis] gi|223527748|gb|EEF29852.1|
           phospho-n-acetylmuramoyl-pentapeptide-transferase,
           putative [Ricinus communis]
          Length = 503

 Score =  238 bits (606), Expect = 9e-61
 Identities = 127/203 (62%), Positives = 141/203 (69%)
 Frame = -1

Query: 635 TSLINIV*WKMLVPLPAPXXXXXXXXXXXXLTSFCFVSMGNGINXXXXXXXXXXXXXXXA 456
           TS+ +    KM+VPLP P            LTSFCFVSMGNGI+               A
Sbjct: 301 TSISSPYSMKMIVPLPGPLGLVCLGRFYLLLTSFCFVSMGNGIDLTDGLDGLAGGTAALA 360

Query: 455 FIGMSIAVLPISSDLSIFGVSMAGACIGFLLHNRYKASVFMGDTXXXXXXXXXXXXXACT 276
           FIGMSIAVLPI S+L+IFG SMAGAC+GFLLHNRYKAS+FMGDT             ACT
Sbjct: 361 FIGMSIAVLPICSELAIFGSSMAGACVGFLLHNRYKASIFMGDTGSLALGGALASMAACT 420

Query: 275 GMFFPLFIASGVFVIEALSVIVQVFYFKTTKCFYGVGLRLFRMAPLHHHFELCGFKEPHI 96
           GMFFPLFI+SG+FV+EA SVI+QV YFK TK   GVG RLFRMAP HHH ELCGFKEP I
Sbjct: 421 GMFFPLFISSGIFVLEASSVIMQVAYFKATKSLRGVGHRLFRMAPFHHHLELCGFKEPII 480

Query: 95  VACTYVVSCILAIYAGYVGLISA 27
           VA  YV SC+LA+ AGYVGLISA
Sbjct: 481 VAGAYVASCLLALVAGYVGLISA 503


>ref|XP_002316728.1| predicted protein [Populus trichocarpa] gi|222859793|gb|EEE97340.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score =  226 bits (577), Expect = 2e-57
 Identities = 122/203 (60%), Positives = 138/203 (67%)
 Frame = -1

Query: 635 TSLINIV*WKMLVPLPAPXXXXXXXXXXXXLTSFCFVSMGNGINXXXXXXXXXXXXXXXA 456
           TS+ +    KMLV LPAP            LTSFCFVSMGNGIN               A
Sbjct: 123 TSISSPYSMKMLVALPAPLGLICLGKYYSLLTSFCFVSMGNGINLTDGLDGLAAGTAALA 182

Query: 455 FIGMSIAVLPISSDLSIFGVSMAGACIGFLLHNRYKASVFMGDTXXXXXXXXXXXXXACT 276
           F+GMSIAVLPI  +L+IFG SMAGAC GFLLHNRYKASVFMGDT             AC+
Sbjct: 183 FVGMSIAVLPICPELAIFGASMAGACFGFLLHNRYKASVFMGDTGSLALGGALAAMAACS 242

Query: 275 GMFFPLFIASGVFVIEALSVIVQVFYFKTTKCFYGVGLRLFRMAPLHHHFELCGFKEPHI 96
           GMF PLFI+SG+F ++A SVI+QV YFKTTK   G G RLFRMAP+HHH ELCG KEP I
Sbjct: 243 GMFLPLFISSGIFFLDASSVIMQVLYFKTTKRMRGDGCRLFRMAPIHHHLELCGLKEPVI 302

Query: 95  VACTYVVSCILAIYAGYVGLISA 27
           VA  YV+S +LA++AGYVGLISA
Sbjct: 303 VAGAYVISGVLALFAGYVGLISA 325


>emb|CBI30860.3| unnamed protein product [Vitis vinifera]
          Length = 689

 Score =  219 bits (557), Expect = 4e-55
 Identities = 113/180 (62%), Positives = 124/180 (68%)
 Frame = -1

Query: 608 KMLVPLPAPXXXXXXXXXXXXLTSFCFVSMGNGINXXXXXXXXXXXXXXXAFIGMSIAVL 429
           KMLVPLPAP            LT+FCFVSMGNG+N               AFIGMSI+VL
Sbjct: 329 KMLVPLPAPLGLVCLGKYYLFLTTFCFVSMGNGVNLTDGLDGLAGGTAALAFIGMSISVL 388

Query: 428 PISSDLSIFGVSMAGACIGFLLHNRYKASVFMGDTXXXXXXXXXXXXXACTGMFFPLFIA 249
           PI  DL++FG SMAGAC GFLLHNRYKASVFMGDT             ACTGMFFPLFI+
Sbjct: 389 PICPDLAVFGASMAGACFGFLLHNRYKASVFMGDTGSLALGGALAAMAACTGMFFPLFIS 448

Query: 248 SGVFVIEALSVIVQVFYFKTTKCFYGVGLRLFRMAPLHHHFELCGFKEPHIVACTYVVSC 69
           SG+FV+E +SVI+QV YFKTTK F G G RLFRMAP HHH ELCG KEP IVA  YV+SC
Sbjct: 449 SGIFVLETVSVIMQVSYFKTTKFFQGAGRRLFRMAPFHHHLELCGLKEPIIVAGAYVISC 508


>ref|XP_004147410.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase
           homolog [Cucumis sativus]
           gi|449527335|ref|XP_004170667.1| PREDICTED:
           phospho-N-acetylmuramoyl-pentapeptide-transferase
           homolog [Cucumis sativus]
          Length = 521

 Score =  218 bits (556), Expect = 6e-55
 Identities = 116/194 (59%), Positives = 130/194 (67%)
 Frame = -1

Query: 608 KMLVPLPAPXXXXXXXXXXXXLTSFCFVSMGNGINXXXXXXXXXXXXXXXAFIGMSIAVL 429
           KML+P+PAP            LTSFCFVSMGNGIN               AFIGM+IAVL
Sbjct: 328 KMLIPMPAPLGLVFLGKCYMWLTSFCFVSMGNGINQTDGLDGLAGGTAALAFIGMAIAVL 387

Query: 428 PISSDLSIFGVSMAGACIGFLLHNRYKASVFMGDTXXXXXXXXXXXXXACTGMFFPLFIA 249
           PISSDLSIFG SM+GAC+GFLLHNR+KASVFMGDT             AC+GMF PLFI+
Sbjct: 388 PISSDLSIFGASMSGACVGFLLHNRFKASVFMGDTGSFALGGALAAMAACSGMFLPLFIS 447

Query: 248 SGVFVIEALSVIVQVFYFKTTKCFYGVGLRLFRMAPLHHHFELCGFKEPHIVACTYVVSC 69
           S VFV+E  SVI+QV YFK T    G G  +F+M P HHH ELCG KEP IVA  Y +S 
Sbjct: 448 SLVFVLETSSVILQVVYFKMTTKLEGAGRHIFQMVPFHHHLELCGIKEPFIVAGAYTISS 507

Query: 68  ILAIYAGYVGLISA 27
           ILA+ AGYVGLISA
Sbjct: 508 ILALLAGYVGLISA 521


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