BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016282
         (1210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, p...   370   e-100
ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation spec...   367   2e-99
ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation spec...   365   2e-98
gb|AFK44906.1| unknown [Medicago truncatula]                          364   3e-98
ref|NP_001237041.1| uncharacterized protein LOC100306068 [Glycin...   363   6e-98

>ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223549917|gb|EEF51404.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 200

 Score =  370 bits (949), Expect = e-100
 Identities = 178/198 (89%), Positives = 181/198 (91%)
 Frame = +1

Query: 118 MVNSAIVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMREGMRTSVEAILLVQEHN 297
           MVNS++VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYM+EGMRTSVEAILLVQEHN
Sbjct: 1   MVNSSVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60

Query: 298 HPHILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXXQPDWQIGECVAIWW 477
           HPHILLLQIGNTFCKLPGGRLKPGENEIEG                 PDWQIGECVAIWW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 120

Query: 478 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 657
           RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180

Query: 658 PVISTIPQQLSRFQFNMI 711
           PVISTIPQQLSRFQFNMI
Sbjct: 181 PVISTIPQQLSRFQFNMI 198


>ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5 isoform 1 [Vitis vinifera]
           gi|297745235|emb|CBI40315.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  367 bits (943), Expect = 2e-99
 Identities = 176/198 (88%), Positives = 180/198 (90%)
 Frame = +1

Query: 118 MVNSAIVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMREGMRTSVEAILLVQEHN 297
           MV S +VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYM+EGMRTSVEAILLVQEHN
Sbjct: 1   MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60

Query: 298 HPHILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXXQPDWQIGECVAIWW 477
           HPHILLLQIGNTFCKLPGGRLKPGENEIEG                QPDWQIGECVAIWW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSLALQPDWQIGECVAIWW 120

Query: 478 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 657
           RPNFETIMYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180

Query: 658 PVISTIPQQLSRFQFNMI 711
           PVISTIPQQLSRFQFNM+
Sbjct: 181 PVISTIPQQLSRFQFNMM 198


>ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Cucumis sativus]
           gi|449480168|ref|XP_004155818.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           [Cucumis sativus]
          Length = 200

 Score =  365 bits (936), Expect = 2e-98
 Identities = 174/198 (87%), Positives = 179/198 (90%)
 Frame = +1

Query: 118 MVNSAIVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMREGMRTSVEAILLVQEHN 297
           MV S +VNTYPLSSYTFGTKEPK+EKDTSVADRLARMKVNYM+EGMRTSVEAILLVQEH 
Sbjct: 1   MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60

Query: 298 HPHILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXXQPDWQIGECVAIWW 477
           HPHILLLQIGNTFCKLPGGRLKPGENEIEG                QPDWQIGECVAIWW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSLQPDWQIGECVAIWW 120

Query: 478 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 657
           RPNFET+MYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180

Query: 658 PVISTIPQQLSRFQFNMI 711
           PVISTIPQQLSRFQFNMI
Sbjct: 181 PVISTIPQQLSRFQFNMI 198


>gb|AFK44906.1| unknown [Medicago truncatula]
          Length = 200

 Score =  364 bits (934), Expect = 3e-98
 Identities = 175/200 (87%), Positives = 178/200 (89%)
 Frame = +1

Query: 118 MVNSAIVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMREGMRTSVEAILLVQEHN 297
           M+ S +VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYM+EGMRTSVE ILLVQEHN
Sbjct: 1   MIPSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60

Query: 298 HPHILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXXQPDWQIGECVAIWW 477
           HPHILLLQIGNTFCKLPGGRLKPGENEIEG                 PDWQIGECVAIWW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPGLVPDWQIGECVAIWW 120

Query: 478 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 657
           RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180

Query: 658 PVISTIPQQLSRFQFNMINN 717
           PVISTIPQQLSRFQF MI N
Sbjct: 181 PVISTIPQQLSRFQFKMITN 200


>ref|NP_001237041.1| uncharacterized protein LOC100306068 [Glycine max]
           gi|255627433|gb|ACU14061.1| unknown [Glycine max]
          Length = 200

 Score =  363 bits (931), Expect = 6e-98
 Identities = 175/200 (87%), Positives = 178/200 (89%)
 Frame = +1

Query: 118 MVNSAIVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMREGMRTSVEAILLVQEHN 297
           MV+S +VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYM+EGMRTSVE ILLVQEHN
Sbjct: 1   MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60

Query: 298 HPHILLLQIGNTFCKLPGGRLKPGENEIEGXXXXXXXXXXXXXXXXQPDWQIGECVAIWW 477
           HPHILLLQIGNTFCKLPGGRLKPGENE EG                 PDWQIGECVAIWW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENENEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 120

Query: 478 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 657
           RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180

Query: 658 PVISTIPQQLSRFQFNMINN 717
           PVISTIPQQLSRFQF MI N
Sbjct: 181 PVISTIPQQLSRFQFKMITN 200