BLASTX nr result

ID: Coptis24_contig00016281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016281
         (1996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267687.2| PREDICTED: MORC family CW-type zinc finger p...   708   0.0  
emb|CBI17427.3| unnamed protein product [Vitis vinifera]              708   0.0  
ref|XP_002327779.1| predicted protein [Populus trichocarpa] gi|2...   670   0.0  
ref|XP_002533659.1| zinc finger protein, putative [Ricinus commu...   608   e-171
ref|XP_002867022.1| predicted protein [Arabidopsis lyrata subsp....   572   e-160

>ref|XP_002267687.2| PREDICTED: MORC family CW-type zinc finger protein 3 [Vitis vinifera]
          Length = 653

 Score =  708 bits (1827), Expect = 0.0
 Identities = 372/608 (61%), Positives = 448/608 (73%), Gaps = 15/608 (2%)
 Frame = -2

Query: 1890 RSFWKAGGYDVGLTKSLHEQALLEHARVHPKFLHSNATSHKWAFGAIAELLDNAVDEISK 1711
            RSFWKAG YD   +K       LEHARVHPKFLHSNATSHKWAFGAIAELLDNAVDEI  
Sbjct: 59   RSFWKAGAYDNTPSKLTPAPDQLEHARVHPKFLHSNATSHKWAFGAIAELLDNAVDEICN 118

Query: 1710 GATFVKLDRIYNPKDHSPALLFRDDGGGMDPESLRQCMSLGYSNKKA-TAIGQYGNGFKT 1534
            GATFVKLDRI N KD+SPALLF+DDGGGMDPES+R+CMSLGYS+KK+ T IGQYGNGFKT
Sbjct: 119  GATFVKLDRIDNRKDNSPALLFQDDGGGMDPESIRKCMSLGYSSKKSNTTIGQYGNGFKT 178

Query: 1533 STMRLGADVIVFSRKSHGSHSTQSIGLLSYTFLRKTGQDDVIVPMIDYESLGDRRQPIIH 1354
            STMRLGADVIVFSR S  S +TQSIGLLSYTFLR+TGQDDVIVPM+D++      +PII+
Sbjct: 179  STMRLGADVIVFSRASRTSRATQSIGLLSYTFLRRTGQDDVIVPMVDFDISDHWAEPIIY 238

Query: 1353 SSLNDWSCNLGTILEWSPFASEQELMLQFEDLGAHGTKIVVYNLWLNXXXXXXXXXXXXX 1174
            SS  DWS NL TILEWSPFAS++ELM QFED+G HGTKI++YNLWLN             
Sbjct: 239  SSKEDWSTNLKTILEWSPFASKEELMQQFEDIGPHGTKIIIYNLWLNDEGIFELNFDDDD 298

Query: 1173 XDIRLRDEVSKS----LKKRDVLIESHISYHIRFSLRAYASVLYLRRFKNFSIILRGKPV 1006
             DIRLRDE ++     + K+   ++SHISY IR+SLRAYAS+LYLR+F NF IILRGKPV
Sbjct: 299  EDIRLRDEANRGSLSKVPKKVAELQSHISYCIRYSLRAYASILYLRKFTNFQIILRGKPV 358

Query: 1005 QQYSIADDLKYMTVVMYRPQLAKASKEVSVKTKIGFAKEAPELPISGFNVYHKNRLIRPF 826
            QQ++IAD+LKY  VV+YRPQ   A KE S++T IGF KEAP L +SGFNVYHKNRLIRPF
Sbjct: 359  QQFNIADELKYPKVVIYRPQHNTALKEASMETTIGFIKEAPALGVSGFNVYHKNRLIRPF 418

Query: 825  WKVTNDGSSRGNGVIGVLEANFIEPAHDKQDFERSALFIRLETRLKQMIIDFWKSHFHFL 646
            WKVT+DGSS+GNGV+GVLEANFIEPAHDKQDFERS+LFIRLET+LKQM++D+WKS+ H +
Sbjct: 419  WKVTSDGSSKGNGVVGVLEANFIEPAHDKQDFERSSLFIRLETKLKQMLMDYWKSNCHLM 478

Query: 645  GARPQIPYIRNMQKECPID-----VANVQSELATGQPVIGLSANMQQGMNLDHPVIGLAA 481
            G +P    ++NMQK+ P        A++Q +L   Q ++GL+AN ++ MNLD P+  L A
Sbjct: 479  GHQPPGSRVQNMQKKHPAQSPVGHAAHIQKQLPANQHIVGLTANTKKEMNLDQPINCLTA 538

Query: 480  NM-----HVSSNGQQTSDMYRDFSDVQPIIGLAADSQMQANARNQREGSGHPGSSKDGTG 316
            N+     +V    +  + +  +   VQPIIGL             REGS    +S DG+G
Sbjct: 539  NLGQDVDNVQPGNRCRTSVREELPAVQPIIGL-------------REGSFKEVTSADGSG 585

Query: 315  SALVDQICDENIELFMRCEQHREKETDXXXXXXXXXXXXXXTKRKCSQISSRLESQRKHR 136
               VD+IC+ENI+LFMRCE+H  KE +               K+KC+Q+SS LE +RK R
Sbjct: 586  LISVDKICEENIQLFMRCEEHMRKENELKQTISELERKLEEAKKKCAQLSSHLEIRRKQR 645

Query: 135  TIREQTEK 112
             I + TEK
Sbjct: 646  -ILKSTEK 652


>emb|CBI17427.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  708 bits (1827), Expect = 0.0
 Identities = 372/608 (61%), Positives = 448/608 (73%), Gaps = 15/608 (2%)
 Frame = -2

Query: 1890 RSFWKAGGYDVGLTKSLHEQALLEHARVHPKFLHSNATSHKWAFGAIAELLDNAVDEISK 1711
            RSFWKAG YD   +K       LEHARVHPKFLHSNATSHKWAFGAIAELLDNAVDEI  
Sbjct: 47   RSFWKAGAYDNTPSKLTPAPDQLEHARVHPKFLHSNATSHKWAFGAIAELLDNAVDEICN 106

Query: 1710 GATFVKLDRIYNPKDHSPALLFRDDGGGMDPESLRQCMSLGYSNKKA-TAIGQYGNGFKT 1534
            GATFVKLDRI N KD+SPALLF+DDGGGMDPES+R+CMSLGYS+KK+ T IGQYGNGFKT
Sbjct: 107  GATFVKLDRIDNRKDNSPALLFQDDGGGMDPESIRKCMSLGYSSKKSNTTIGQYGNGFKT 166

Query: 1533 STMRLGADVIVFSRKSHGSHSTQSIGLLSYTFLRKTGQDDVIVPMIDYESLGDRRQPIIH 1354
            STMRLGADVIVFSR S  S +TQSIGLLSYTFLR+TGQDDVIVPM+D++      +PII+
Sbjct: 167  STMRLGADVIVFSRASRTSRATQSIGLLSYTFLRRTGQDDVIVPMVDFDISDHWAEPIIY 226

Query: 1353 SSLNDWSCNLGTILEWSPFASEQELMLQFEDLGAHGTKIVVYNLWLNXXXXXXXXXXXXX 1174
            SS  DWS NL TILEWSPFAS++ELM QFED+G HGTKI++YNLWLN             
Sbjct: 227  SSKEDWSTNLKTILEWSPFASKEELMQQFEDIGPHGTKIIIYNLWLNDEGIFELNFDDDD 286

Query: 1173 XDIRLRDEVSKS----LKKRDVLIESHISYHIRFSLRAYASVLYLRRFKNFSIILRGKPV 1006
             DIRLRDE ++     + K+   ++SHISY IR+SLRAYAS+LYLR+F NF IILRGKPV
Sbjct: 287  EDIRLRDEANRGSLSKVPKKVAELQSHISYCIRYSLRAYASILYLRKFTNFQIILRGKPV 346

Query: 1005 QQYSIADDLKYMTVVMYRPQLAKASKEVSVKTKIGFAKEAPELPISGFNVYHKNRLIRPF 826
            QQ++IAD+LKY  VV+YRPQ   A KE S++T IGF KEAP L +SGFNVYHKNRLIRPF
Sbjct: 347  QQFNIADELKYPKVVIYRPQHNTALKEASMETTIGFIKEAPALGVSGFNVYHKNRLIRPF 406

Query: 825  WKVTNDGSSRGNGVIGVLEANFIEPAHDKQDFERSALFIRLETRLKQMIIDFWKSHFHFL 646
            WKVT+DGSS+GNGV+GVLEANFIEPAHDKQDFERS+LFIRLET+LKQM++D+WKS+ H +
Sbjct: 407  WKVTSDGSSKGNGVVGVLEANFIEPAHDKQDFERSSLFIRLETKLKQMLMDYWKSNCHLM 466

Query: 645  GARPQIPYIRNMQKECPID-----VANVQSELATGQPVIGLSANMQQGMNLDHPVIGLAA 481
            G +P    ++NMQK+ P        A++Q +L   Q ++GL+AN ++ MNLD P+  L A
Sbjct: 467  GHQPPGSRVQNMQKKHPAQSPVGHAAHIQKQLPANQHIVGLTANTKKEMNLDQPINCLTA 526

Query: 480  NM-----HVSSNGQQTSDMYRDFSDVQPIIGLAADSQMQANARNQREGSGHPGSSKDGTG 316
            N+     +V    +  + +  +   VQPIIGL             REGS    +S DG+G
Sbjct: 527  NLGQDVDNVQPGNRCRTSVREELPAVQPIIGL-------------REGSFKEVTSADGSG 573

Query: 315  SALVDQICDENIELFMRCEQHREKETDXXXXXXXXXXXXXXTKRKCSQISSRLESQRKHR 136
               VD+IC+ENI+LFMRCE+H  KE +               K+KC+Q+SS LE +RK R
Sbjct: 574  LISVDKICEENIQLFMRCEEHMRKENELKQTISELERKLEEAKKKCAQLSSHLEIRRKQR 633

Query: 135  TIREQTEK 112
             I + TEK
Sbjct: 634  -ILKSTEK 640


>ref|XP_002327779.1| predicted protein [Populus trichocarpa] gi|222836864|gb|EEE75257.1|
            predicted protein [Populus trichocarpa]
          Length = 627

 Score =  670 bits (1729), Expect = 0.0
 Identities = 353/602 (58%), Positives = 433/602 (71%), Gaps = 5/602 (0%)
 Frame = -2

Query: 1902 SLEFRSFWKAGGYDVG-LTKSLHEQALLEHARVHPKFLHSNATSHKWAFGAIAELLDNAV 1726
            SL+ RSFWKAG YDVG +      Q  LEHARVHPKFLHSNATSHKWAFGAIAELLDNAV
Sbjct: 50   SLDCRSFWKAGAYDVGPIASKAPAQGQLEHARVHPKFLHSNATSHKWAFGAIAELLDNAV 109

Query: 1725 DEISKGATFVKLDRIYNPKDHSPALLFRDDGGGMDPESLRQCMSLGYSNKKA-TAIGQYG 1549
            DE+  GATFVK+D+I   KD+SPALLF+DDGGGMDP+ +R+CMSLGYS+KK+ T IGQYG
Sbjct: 110  DEVHNGATFVKVDKIDIMKDNSPALLFQDDGGGMDPDGIRKCMSLGYSSKKSNTTIGQYG 169

Query: 1548 NGFKTSTMRLGADVIVFSRKSHGSHSTQSIGLLSYTFLRKTGQDDVIVPMIDYESLGDRR 1369
            NGFKTSTMRLGADV+V+S  +    +TQSIGLLSYTFLRKTGQDDVIVPMID++  G+R 
Sbjct: 170  NGFKTSTMRLGADVLVYSCATRAGKATQSIGLLSYTFLRKTGQDDVIVPMIDFDISGNRA 229

Query: 1368 QPIIHSSLNDWSCNLGTILEWSPFASEQELMLQFEDLGAHGTKIVVYNLWLNXXXXXXXX 1189
            +PI++ S +DWS NL TILEWSPFAS++ELM QFED+G HGTKI++YNLWLN        
Sbjct: 230  EPILYGSQDDWSSNLKTILEWSPFASKEELMQQFEDIGRHGTKIIIYNLWLNDEGIYELS 289

Query: 1188 XXXXXXDIRLRDEVS---KSLKKRDVLIESHISYHIRFSLRAYASVLYLRRFKNFSIILR 1018
                  DIRLRDE +     L K+ V + SHISY IR+SLRAYAS+LYLR+F NFSI+LR
Sbjct: 290  FDDDEEDIRLRDEANHGQTKLHKKTVELRSHISYCIRYSLRAYASILYLRKFTNFSIVLR 349

Query: 1017 GKPVQQYSIADDLKYMTVVMYRPQLAKASKEVSVKTKIGFAKEAPELPISGFNVYHKNRL 838
            GKPVQQ++I DDLKY   V Y+PQ+    KEV+V+T +GF KEAP L +SGFNVYHKNRL
Sbjct: 350  GKPVQQFNIVDDLKYSKTVSYKPQVG-TIKEVTVETTVGFIKEAPALSVSGFNVYHKNRL 408

Query: 837  IRPFWKVTNDGSSRGNGVIGVLEANFIEPAHDKQDFERSALFIRLETRLKQMIIDFWKSH 658
            IRPFWKVT D + +GNGV+GVLEANFIEPAHDKQDFERS+L+IRLE RLKQM++D+WK H
Sbjct: 409  IRPFWKVTGDAAVKGNGVVGVLEANFIEPAHDKQDFERSSLYIRLEARLKQMVMDYWKRH 468

Query: 657  FHFLGARPQIPYIRNMQKECPIDVANVQSELATGQPVIGLSANMQQGMNLDHPVIGLAAN 478
             H LG  P      ++QK+        Q  L   +  I L  N ++ M+LD P+    +N
Sbjct: 469  CHLLGILPPGVKSLDIQKQ---GAVKTQKPLPANRHNIDLPTN-EEEMHLDQPI--TRSN 522

Query: 477  MHVSSNGQQTSDMYRDFSDVQPIIGLAADSQMQANARNQREGSGHPGSSKDGTGSALVDQ 298
              + S GQ       D    + IIGLA             +GS +   S DG GS  +DQ
Sbjct: 523  RQLGSTGQS------DLPVEESIIGLA-------------DGSYNGVISDDGLGSKPIDQ 563

Query: 297  ICDENIELFMRCEQHREKETDXXXXXXXXXXXXXXTKRKCSQISSRLESQRKHRTIREQT 118
            IC+ENIELFMRCE++ +KET+               KRKC+Q++S LE++RK + +++Q+
Sbjct: 564  ICEENIELFMRCEEYAKKETELKQTVEELEKELEQAKRKCAQLASHLETKRKQKIMQQQS 623

Query: 117  EK 112
            EK
Sbjct: 624  EK 625


>ref|XP_002533659.1| zinc finger protein, putative [Ricinus communis]
            gi|223526454|gb|EEF28730.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 561

 Score =  608 bits (1569), Expect = e-171
 Identities = 318/514 (61%), Positives = 383/514 (74%), Gaps = 13/514 (2%)
 Frame = -2

Query: 1929 TSSSQKNNHSLEFRSFWKAGGYDVGLTKSLHE-QALLEHARVHPKFLHSNATSHKWAFGA 1753
            T +   N+  LE RSFWKAG YDVG T  +   Q  LEHARVHPKFLHSNATSHKWAFGA
Sbjct: 49   TQTQAPNHRGLECRSFWKAGAYDVGSTPRMATTQGQLEHARVHPKFLHSNATSHKWAFGA 108

Query: 1752 IAELLDNAVDEISKGATFVKLDRIYNPKDHSPALLFRDDGGGMDPESLRQCMSLGYSNKK 1573
            IAELLDNAVDEI  GATF+K+D+I   KD+SPALLF+DDGGGMDP+S+R+CMSLGYS+KK
Sbjct: 109  IAELLDNAVDEIHNGATFLKVDKIDIMKDNSPALLFQDDGGGMDPDSIRKCMSLGYSSKK 168

Query: 1572 AT-AIGQYGNGFKTSTMRLGADVIVFSRKSHGSHSTQSIGLLSYTFLRKTGQDDVIVPMI 1396
            +   IGQYGNGFKTSTMRLGADVIVFSR S GS +TQSIGLLSYT L KTGQDDVIVPM+
Sbjct: 169  SNKTIGQYGNGFKTSTMRLGADVIVFSRASRGSKATQSIGLLSYTLLLKTGQDDVIVPMV 228

Query: 1395 DYESLGDRRQPIIHSSLNDWSCNLGTILEWSPFASEQELMLQFEDLGAHGTKIVVYNLWL 1216
            D++  G   +PII+SS +DWS NL  ILEWSPF S+  LM QFED+G HGTK+++YNLWL
Sbjct: 229  DFDVSGHWAEPIIYSSQDDWSSNLNMILEWSPFTSKDMLMQQFEDIGPHGTKVIIYNLWL 288

Query: 1215 NXXXXXXXXXXXXXXDIRLRDEVSKS----LKKRDVLIESHISYHIRFSLRAYASVLYLR 1048
            N              DIRLRDE ++     L ++ V ++SHISY IR+SLRAYAS+LYLR
Sbjct: 289  NDEGIYELSFDDDEEDIRLRDEANRGGQIKLNQKTVELQSHISYRIRYSLRAYASILYLR 348

Query: 1047 RFKNFSIILRGKPVQQYSIADDLKYMTVVMYRPQLAKASKEVSVKTKIGFAKEAPELPIS 868
            +F NFSIILRGKP+QQY IADDLK+    +YRPQL   SKEV+V+T IGF KEAP L +S
Sbjct: 349  KFTNFSIILRGKPIQQYIIADDLKHSKKAIYRPQLGVTSKEVAVETTIGFIKEAPNLGVS 408

Query: 867  GFNVYHKNRLIRPFWKVTNDGSSRGNGVIGVLEANFIEPAHDKQDFERSALFIRLETRLK 688
            GFNVYHKNRLIRPFWKVT +G+++GN V+GVLEANFIEPAHDKQDFERS+LFIRLE +LK
Sbjct: 409  GFNVYHKNRLIRPFWKVTGEGATKGNYVVGVLEANFIEPAHDKQDFERSSLFIRLEAKLK 468

Query: 687  QMIIDFWKSHFHFLGARPQIPYIR-NMQKECPIDVANVQSELATGQPVIGLSANMQQGMN 511
            QM++D+W ++ + +G +P  P+IR N  K      A    +L T Q   G S N  + ++
Sbjct: 469  QMLMDYWNNNCYLIGHQP--PWIRPNTLKH----TAKSHRQLPTNQHDAGFSVNAGEEIH 522

Query: 510  LDHPVIGLAANM------HVSSNGQQTSDMYRDF 427
            LD  +  L+AN+      H  +     SD+ R F
Sbjct: 523  LDQSLNDLSANLLHLPEDHPVTFSATVSDVSRPF 556


>ref|XP_002867022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297312858|gb|EFH43281.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 631

 Score =  572 bits (1473), Expect = e-160
 Identities = 315/595 (52%), Positives = 408/595 (68%), Gaps = 8/595 (1%)
 Frame = -2

Query: 1902 SLEFRSFWKAGGYDV---GLTKSLHEQALLEHARVHPKFLHSNATSHKWAFGAIAELLDN 1732
            +LE RSFWKAG   V   G+T +     ++EHARVHPKFLHSNATSHKWAFGAIAELLDN
Sbjct: 52   TLECRSFWKAGENFVIPSGVTPTA--PGMVEHARVHPKFLHSNATSHKWAFGAIAELLDN 109

Query: 1731 AVDEISKGATFVKLDRIYNPKDHSPALLFRDDGGGMDPESLRQCMSLGYSNKKA-TAIGQ 1555
            AVDE+  GATFVK+D+I   KD++PAL+F+D+GGGMDP  +R+CMSLGYS+KK+ T IGQ
Sbjct: 110  AVDEVQNGATFVKIDKINIVKDNTPALVFQDNGGGMDPNGIRKCMSLGYSSKKSNTTIGQ 169

Query: 1554 YGNGFKTSTMRLGADVIVFSRKSHGSHSTQSIGLLSYTFLRKTGQDDVIVPMIDYESLGD 1375
            YGNGFKTSTMRLGAD IVFSR + G  STQSIGLLSYTFLRKTGQDDVIVPMID++    
Sbjct: 170  YGNGFKTSTMRLGADAIVFSRSTRGGKSTQSIGLLSYTFLRKTGQDDVIVPMIDFDISSV 229

Query: 1374 RRQPIIHSSLNDWSCNLGTILEWSPFASEQELMLQFEDLGAHGTKIVVYNLWLNXXXXXX 1195
            R QPII+ S  DWS NL  +L+WSPF++  E++ QFED+G HGTK+++YNLWLN      
Sbjct: 230  RPQPIIYGSPGDWSTNLNILLKWSPFSTMDEILQQFEDIGTHGTKVIIYNLWLNDEGIYE 289

Query: 1194 XXXXXXXXDIRLRDEVS---KSLKKRDVLIESHISYHIRFSLRAYASVLYLRRFKNFSII 1024
                    DIRLRDE +   K L  + + + SHISY  R SLRAY S+LYL++FKNF II
Sbjct: 290  LSFDDDDEDIRLRDENAQDGKRLYAKTLELRSHISYRYRHSLRAYISMLYLKKFKNFKII 349

Query: 1023 LRGKPVQQYSIADDLKYMTVVMYRPQLAKASKEVSVKTKIGFAKEAPELPISGFNVYHKN 844
            LRG PV+Q++IAD+ ++   +MY+PQ A A +  +   K+GF KEAP+LPI GFNVYHKN
Sbjct: 350  LRGIPVEQFNIADEFRHPETIMYKPQ-AAAMEYAATGIKVGFIKEAPKLPICGFNVYHKN 408

Query: 843  RLIRPFWKVTNDGSSRGNGVIGVLEANFIEPAHDKQDFERSALFIRLETRLKQMIIDFWK 664
            RLIRPFWKV  +GS+RGNGV+GVLEANFIEPAHDKQDFERS+LF+RLE RLK++I D+W+
Sbjct: 409  RLIRPFWKVVLEGSTRGNGVVGVLEANFIEPAHDKQDFERSSLFLRLEGRLKRIISDYWQ 468

Query: 663  SHFHFLGARP-QIPYIRNMQKECPIDVANVQSELATGQPVIGLSANMQQGMNLDHPVIGL 487
            SH H  G +  QIP  R+ +    I + +    ++T  P    S  + QG     P+I  
Sbjct: 469  SHCHVFGYQTGQIPADRSKR----IAIPDQPPTVSTFNPSPLPSDKISQG----GPII-R 519

Query: 486  AANMHVSSNGQQTSDMYRDFSDVQPIIGLAADSQMQANARNQREGSGHPGSSKDGTGSAL 307
              N+   SN   +  +      ++   GL   S  Q    N +  +   G++  G  +  
Sbjct: 520  EINL---SNASSSRTVAVAAPHLRNSTGLR--SNFQPVQLNPQPAAADTGNNIVGKSA-- 572

Query: 306  VDQICDENIELFMRCEQHREKETDXXXXXXXXXXXXXXTKRKCSQISSRLESQRK 142
             D+I +ENI+LFMRCE++ +KE +               K KC+Q++  +++++K
Sbjct: 573  -DEIREENIQLFMRCEEYIKKENEIEQTVKSLEKELEEVKSKCAQLALLVDAKKK 626


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