BLASTX nr result

ID: Coptis24_contig00016279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016279
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534484.1| transcription factor, putative [Ricinus comm...   119   2e-25
ref|XP_002306552.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25
ref|XP_002327351.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_003526539.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   115   4e-24
ref|XP_002514009.1| transcription factor, putative [Ricinus comm...   115   4e-24

>ref|XP_002534484.1| transcription factor, putative [Ricinus communis]
           gi|223525213|gb|EEF27897.1| transcription factor,
           putative [Ricinus communis]
          Length = 245

 Score =  119 bits (299), Expect = 2e-25
 Identities = 54/72 (75%), Positives = 64/72 (88%)
 Frame = +2

Query: 2   GGGGSSVKSKRFRTKFTQEQKEKMMEFAERLGWRIQKHDDVALNQFCLENGLKRNVLKVW 181
           GG GS  K+KRFRTKFTQEQK++M+EFAE++GWRI K+DD+ALNQFC E G+KRNVLKVW
Sbjct: 153 GGLGSRAKNKRFRTKFTQEQKDRMLEFAEKIGWRINKNDDMALNQFCDEVGVKRNVLKVW 212

Query: 182 MHNNKNTLRKRD 217
           MHNNKN  R+RD
Sbjct: 213 MHNNKNAHRRRD 224


>ref|XP_002306552.1| predicted protein [Populus trichocarpa] gi|222856001|gb|EEE93548.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score =  119 bits (299), Expect = 2e-25
 Identities = 53/71 (74%), Positives = 62/71 (87%)
 Frame = +2

Query: 2   GGGGSSVKSKRFRTKFTQEQKEKMMEFAERLGWRIQKHDDVALNQFCLENGLKRNVLKVW 181
           GGGG S   KRFRTKF+QEQKEKM+ FAERLGWRIQKHD+ A+ QFC ENG+KR+VLKVW
Sbjct: 180 GGGGGSSSKKRFRTKFSQEQKEKMVAFAERLGWRIQKHDEAAVEQFCAENGVKRHVLKVW 239

Query: 182 MHNNKNTLRKR 214
           MHNNK+T+ K+
Sbjct: 240 MHNNKHTIGKK 250


>ref|XP_002327351.1| predicted protein [Populus trichocarpa] gi|222835721|gb|EEE74156.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score =  118 bits (296), Expect = 4e-25
 Identities = 53/68 (77%), Positives = 61/68 (89%)
 Frame = +2

Query: 14  SSVKSKRFRTKFTQEQKEKMMEFAERLGWRIQKHDDVALNQFCLENGLKRNVLKVWMHNN 193
           S   +KRFRTKFTQEQKE+M+EFAE++GWRIQKHDD+ALNQFC E G+KRNVLKVWMHNN
Sbjct: 127 SGSSNKRFRTKFTQEQKERMLEFAEKIGWRIQKHDDMALNQFCNEVGIKRNVLKVWMHNN 186

Query: 194 KNTLRKRD 217
           KN  R+RD
Sbjct: 187 KNAHRRRD 194


>ref|XP_003526539.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Glycine max]
          Length = 298

 Score =  115 bits (288), Expect = 4e-24
 Identities = 51/76 (67%), Positives = 62/76 (81%)
 Frame = +2

Query: 2   GGGGSSVKSKRFRTKFTQEQKEKMMEFAERLGWRIQKHDDVALNQFCLENGLKRNVLKVW 181
           GGG  S   KRFRTKFTQEQK+KM+ FAE+LGWRIQKHD+ A+ QFC E  +KR+VLKVW
Sbjct: 204 GGGSGSGTKKRFRTKFTQEQKDKMLAFAEKLGWRIQKHDEAAVEQFCAETCIKRHVLKVW 263

Query: 182 MHNNKNTLRKRDQHTS 229
           MHNNK+TL   +QH++
Sbjct: 264 MHNNKHTLANSEQHSA 279


>ref|XP_002514009.1| transcription factor, putative [Ricinus communis]
           gi|223547095|gb|EEF48592.1| transcription factor,
           putative [Ricinus communis]
          Length = 270

 Score =  115 bits (288), Expect = 4e-24
 Identities = 50/70 (71%), Positives = 61/70 (87%)
 Frame = +2

Query: 5   GGGSSVKSKRFRTKFTQEQKEKMMEFAERLGWRIQKHDDVALNQFCLENGLKRNVLKVWM 184
           GGGS    KRFRTKF+QEQK+KM++F+ERLGWRIQKHD+ A+ QFC +NG+KR VLKVWM
Sbjct: 200 GGGSGGSKKRFRTKFSQEQKDKMLDFSERLGWRIQKHDEAAVEQFCSDNGIKRQVLKVWM 259

Query: 185 HNNKNTLRKR 214
           HNNK+TL K+
Sbjct: 260 HNNKHTLGKK 269


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