BLASTX nr result

ID: Coptis24_contig00016277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016277
         (1590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273171.1| PREDICTED: cyclin-dependent kinase E-1 [Viti...   535   e-149
dbj|BAK00037.1| predicted protein [Hordeum vulgare subsp. vulgare]    531   e-148
gb|ABB48045.2| Protein kinase domain containing protein, express...   529   e-148
ref|NP_001065512.1| Os10g0580300 [Oryza sativa Japonica Group] g...   529   e-148
gb|AAP55188.2| Protein kinase domain containing protein, express...   529   e-148

>ref|XP_002273171.1| PREDICTED: cyclin-dependent kinase E-1 [Vitis vinifera]
            gi|296082615|emb|CBI21620.3| unnamed protein product
            [Vitis vinifera]
          Length = 481

 Score =  535 bits (1379), Expect = e-149
 Identities = 265/302 (87%), Positives = 274/302 (90%), Gaps = 2/302 (0%)
 Frame = +2

Query: 125  PVWLQQYDLIGKIGEGTYGLVFLAKIKS--QRGKSIAIKKFKQSKDGDGVSPTAIREIML 298
            P WLQQYDLIGKIGEGTYGLVFLA+ KS   RGKSIAIKKFKQSKDGDGVSPTAIREIML
Sbjct: 24   PAWLQQYDLIGKIGEGTYGLVFLARTKSPSNRGKSIAIKKFKQSKDGDGVSPTAIREIML 83

Query: 299  LREINHENVVKLVNVHINSADMSLYLAFDYAEHDLYEIIRHHREKVNFSINQYTVKSXXX 478
            LREI+HENVVKLVNVHIN ADMSLYLAFDYAEHDLYEIIRHHR+KV   I+ YTVKS   
Sbjct: 84   LREISHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKVTNPIHPYTVKSLLW 143

Query: 479  XXXXXXXXXHSNWIIHRDLKPSNILVMGDGEEQGVVKIADFGLARIYQAPLKPLADNGVV 658
                     HSNWIIHRDLKPSNILVMG+G+EQGVVKIADFGLARIYQAPLKPL+DNGVV
Sbjct: 144  QLLNGLNYLHSNWIIHRDLKPSNILVMGEGDEQGVVKIADFGLARIYQAPLKPLSDNGVV 203

Query: 659  VTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGVEVKATPNPFQLDQLDKI 838
            VTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQG EVKATPNPFQLDQLDKI
Sbjct: 204  VTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATPNPFQLDQLDKI 263

Query: 839  FKVLGHPTPEKWPTLVNLPHWQSDQQHIQGHKYENPGLHSVVHLPQKSPAYDLLSKMLEY 1018
            F+VLGHPT EKWPTLVNLPHWQSD QHIQGHKYENPGL+SVVHLP KS AYDLLSKMLEY
Sbjct: 264  FRVLGHPTQEKWPTLVNLPHWQSDVQHIQGHKYENPGLYSVVHLPLKSAAYDLLSKMLEY 323

Query: 1019 VP 1024
             P
Sbjct: 324  DP 325


>dbj|BAK00037.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 470

 Score =  531 bits (1369), Expect = e-148
 Identities = 257/307 (83%), Positives = 274/307 (89%), Gaps = 7/307 (2%)
 Frame = +2

Query: 125  PVWLQQYDLIGKIGEGTYGLVFLAKIK-------SQRGKSIAIKKFKQSKDGDGVSPTAI 283
            P WLQQY+L+GKIGEGTYGLVFLA++K        +RG  IAIKKFKQSK+GDGVSPTAI
Sbjct: 12   PAWLQQYELVGKIGEGTYGLVFLARLKPTHPQAAGRRGSPIAIKKFKQSKEGDGVSPTAI 71

Query: 284  REIMLLREINHENVVKLVNVHINSADMSLYLAFDYAEHDLYEIIRHHREKVNFSINQYTV 463
            REIMLLREINHENVVKLVNVHIN ADMSLYLAFDYAEHDLYE+IRHHREK+N SINQYTV
Sbjct: 72   REIMLLREINHENVVKLVNVHINHADMSLYLAFDYAEHDLYEVIRHHREKLNLSINQYTV 131

Query: 464  KSXXXXXXXXXXXXHSNWIIHRDLKPSNILVMGDGEEQGVVKIADFGLARIYQAPLKPLA 643
            KS            HSNWIIHRDLKPSNILVMG+GEE G++KIADFGLARIYQAPLKPL+
Sbjct: 132  KSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGIIKIADFGLARIYQAPLKPLS 191

Query: 644  DNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGVEVKATPNPFQLD 823
            DNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGVE KATPNPFQLD
Sbjct: 192  DNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGVEAKATPNPFQLD 251

Query: 824  QLDKIFKVLGHPTPEKWPTLVNLPHWQSDQQHIQGHKYENPGLHSVVHLPQKSPAYDLLS 1003
            QLDKIFKVLGHPT EKWPTL NLP WQ+DQQHIQGHKYEN GLH++VHLPQK PA+DLLS
Sbjct: 252  QLDKIFKVLGHPTVEKWPTLANLPCWQNDQQHIQGHKYENTGLHTIVHLPQKGPAFDLLS 311

Query: 1004 KMLEYVP 1024
            +MLEY P
Sbjct: 312  RMLEYDP 318


>gb|ABB48045.2| Protein kinase domain containing protein, expressed [Oryza sativa
            Japonica Group]
          Length = 346

 Score =  529 bits (1363), Expect = e-148
 Identities = 258/310 (83%), Positives = 273/310 (88%), Gaps = 10/310 (3%)
 Frame = +2

Query: 125  PVWLQQYDLIGKIGEGTYGLVFLAKIKS----------QRGKSIAIKKFKQSKDGDGVSP 274
            P WLQQY+L+GKIGEGTYGLVFLA++K           +RG  IAIKKFKQSK+GDGVSP
Sbjct: 13   PAWLQQYELVGKIGEGTYGLVFLARLKQSHPHAAAGVGRRGSPIAIKKFKQSKEGDGVSP 72

Query: 275  TAIREIMLLREINHENVVKLVNVHINSADMSLYLAFDYAEHDLYEIIRHHREKVNFSINQ 454
            TAIREIMLLREINHENVVKLVNVHIN ADMSLYLAFDYAEHDLYEIIRHHREK+N  IN 
Sbjct: 73   TAIREIMLLREINHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHREKLNLPINP 132

Query: 455  YTVKSXXXXXXXXXXXXHSNWIIHRDLKPSNILVMGDGEEQGVVKIADFGLARIYQAPLK 634
            YTVKS            HSNWIIHRDLKPSNILVMG+GEE G++KIADFGLARIYQAPLK
Sbjct: 133  YTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGIIKIADFGLARIYQAPLK 192

Query: 635  PLADNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGVEVKATPNPF 814
            PL+DNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGVE KATPNPF
Sbjct: 193  PLSDNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGVEAKATPNPF 252

Query: 815  QLDQLDKIFKVLGHPTPEKWPTLVNLPHWQSDQQHIQGHKYENPGLHSVVHLPQKSPAYD 994
            QLDQLDKIFKVLGHPT EKWPTL NLP WQ+DQQHIQGHKYEN GLH++VHLPQKSPA+D
Sbjct: 253  QLDQLDKIFKVLGHPTVEKWPTLANLPCWQNDQQHIQGHKYENTGLHNIVHLPQKSPAFD 312

Query: 995  LLSKMLEYVP 1024
            LLSKMLEY P
Sbjct: 313  LLSKMLEYDP 322


>ref|NP_001065512.1| Os10g0580300 [Oryza sativa Japonica Group]
            gi|122248970|sp|Q336M2.2|CDKE1_ORYSJ RecName:
            Full=Cyclin-dependent kinase E-1; Short=CDKE;1
            gi|12039378|gb|AAG46164.1|AC018727_16 putative
            serine/threonine kinase [Oryza sativa Japonica Group]
            gi|110289665|gb|ABB48043.2| Protein kinase domain
            containing protein, expressed [Oryza sativa Japonica
            Group] gi|113640044|dbj|BAF27349.1| Os10g0580300 [Oryza
            sativa Japonica Group] gi|215694950|dbj|BAG90141.1|
            unnamed protein product [Oryza sativa Japonica Group]
            gi|222613340|gb|EEE51472.1| hypothetical protein
            OsJ_32608 [Oryza sativa Japonica Group]
          Length = 475

 Score =  529 bits (1363), Expect = e-148
 Identities = 258/310 (83%), Positives = 273/310 (88%), Gaps = 10/310 (3%)
 Frame = +2

Query: 125  PVWLQQYDLIGKIGEGTYGLVFLAKIKS----------QRGKSIAIKKFKQSKDGDGVSP 274
            P WLQQY+L+GKIGEGTYGLVFLA++K           +RG  IAIKKFKQSK+GDGVSP
Sbjct: 13   PAWLQQYELVGKIGEGTYGLVFLARLKQSHPHAAAGVGRRGSPIAIKKFKQSKEGDGVSP 72

Query: 275  TAIREIMLLREINHENVVKLVNVHINSADMSLYLAFDYAEHDLYEIIRHHREKVNFSINQ 454
            TAIREIMLLREINHENVVKLVNVHIN ADMSLYLAFDYAEHDLYEIIRHHREK+N  IN 
Sbjct: 73   TAIREIMLLREINHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHREKLNLPINP 132

Query: 455  YTVKSXXXXXXXXXXXXHSNWIIHRDLKPSNILVMGDGEEQGVVKIADFGLARIYQAPLK 634
            YTVKS            HSNWIIHRDLKPSNILVMG+GEE G++KIADFGLARIYQAPLK
Sbjct: 133  YTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGIIKIADFGLARIYQAPLK 192

Query: 635  PLADNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGVEVKATPNPF 814
            PL+DNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGVE KATPNPF
Sbjct: 193  PLSDNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGVEAKATPNPF 252

Query: 815  QLDQLDKIFKVLGHPTPEKWPTLVNLPHWQSDQQHIQGHKYENPGLHSVVHLPQKSPAYD 994
            QLDQLDKIFKVLGHPT EKWPTL NLP WQ+DQQHIQGHKYEN GLH++VHLPQKSPA+D
Sbjct: 253  QLDQLDKIFKVLGHPTVEKWPTLANLPCWQNDQQHIQGHKYENTGLHNIVHLPQKSPAFD 312

Query: 995  LLSKMLEYVP 1024
            LLSKMLEY P
Sbjct: 313  LLSKMLEYDP 322


>gb|AAP55188.2| Protein kinase domain containing protein, expressed [Oryza sativa
            Japonica Group]
          Length = 422

 Score =  529 bits (1363), Expect = e-148
 Identities = 258/310 (83%), Positives = 273/310 (88%), Gaps = 10/310 (3%)
 Frame = +2

Query: 125  PVWLQQYDLIGKIGEGTYGLVFLAKIKS----------QRGKSIAIKKFKQSKDGDGVSP 274
            P WLQQY+L+GKIGEGTYGLVFLA++K           +RG  IAIKKFKQSK+GDGVSP
Sbjct: 13   PAWLQQYELVGKIGEGTYGLVFLARLKQSHPHAAAGVGRRGSPIAIKKFKQSKEGDGVSP 72

Query: 275  TAIREIMLLREINHENVVKLVNVHINSADMSLYLAFDYAEHDLYEIIRHHREKVNFSINQ 454
            TAIREIMLLREINHENVVKLVNVHIN ADMSLYLAFDYAEHDLYEIIRHHREK+N  IN 
Sbjct: 73   TAIREIMLLREINHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHREKLNLPINP 132

Query: 455  YTVKSXXXXXXXXXXXXHSNWIIHRDLKPSNILVMGDGEEQGVVKIADFGLARIYQAPLK 634
            YTVKS            HSNWIIHRDLKPSNILVMG+GEE G++KIADFGLARIYQAPLK
Sbjct: 133  YTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGIIKIADFGLARIYQAPLK 192

Query: 635  PLADNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGVEVKATPNPF 814
            PL+DNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGVE KATPNPF
Sbjct: 193  PLSDNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGVEAKATPNPF 252

Query: 815  QLDQLDKIFKVLGHPTPEKWPTLVNLPHWQSDQQHIQGHKYENPGLHSVVHLPQKSPAYD 994
            QLDQLDKIFKVLGHPT EKWPTL NLP WQ+DQQHIQGHKYEN GLH++VHLPQKSPA+D
Sbjct: 253  QLDQLDKIFKVLGHPTVEKWPTLANLPCWQNDQQHIQGHKYENTGLHNIVHLPQKSPAFD 312

Query: 995  LLSKMLEYVP 1024
            LLSKMLEY P
Sbjct: 313  LLSKMLEYDP 322


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