BLASTX nr result

ID: Coptis24_contig00016271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016271
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318679.1| predicted protein [Populus trichocarpa] gi|2...   254   5e-66
ref|XP_002299719.1| predicted protein [Populus trichocarpa] gi|2...   253   1e-65
ref|XP_002514272.1| nitrate transporter, putative [Ricinus commu...   253   1e-65
ref|XP_002279092.1| PREDICTED: probable peptide transporter At1g...   253   2e-65
emb|CBI36110.3| unnamed protein product [Vitis vinifera]              253   2e-65

>ref|XP_002318679.1| predicted protein [Populus trichocarpa] gi|222859352|gb|EEE96899.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  254 bits (650), Expect = 5e-66
 Identities = 118/186 (63%), Positives = 154/186 (82%)
 Frame = +2

Query: 2   LNADGFASEPWKLCTIEQVEELKALIRVIPLWSTGIMIAVTISQHSFPVLQASTMDREVT 181
           L+ DG A +PW+LCT++QVEELK+LI+V+P+ STGIMIAVT++QH+FPVLQA+TMDR   
Sbjct: 310 LDCDGLAIDPWRLCTVKQVEELKSLIKVLPICSTGIMIAVTLNQHAFPVLQATTMDRHFI 369

Query: 182 SGFSIPPGSYGVFGILTLTVWVAIYDRLLVPFLSRFTGNPRGLGLKQRMGIGLLISCLAM 361
               +P GSYGVF IL LT+WVA+YDRLLVP L++FT  P+GL  KQRMGIG++ISC+A 
Sbjct: 370 GNQKLPAGSYGVFTILALTIWVAVYDRLLVPLLAKFTNRPQGLSNKQRMGIGIVISCIAT 429

Query: 362 AVSAMVEAERRKTAIKQGLLNNGSAIVNMSAMWLIPQHCLAGLSEAFNAIGQIDFYYSQF 541
           A +  VE +RR TA++QGL ++   +V+MSA WLIPQ+CL GL EAF+A+GQIDF+YSQF
Sbjct: 430 ATAGAVENKRRATALRQGLADHPRDVVDMSANWLIPQYCLVGLGEAFSAVGQIDFFYSQF 489

Query: 542 PKSMSS 559
           PK+M+S
Sbjct: 490 PKTMTS 495


>ref|XP_002299719.1| predicted protein [Populus trichocarpa] gi|222846977|gb|EEE84524.1|
           predicted protein [Populus trichocarpa]
          Length = 479

 Score =  253 bits (647), Expect = 1e-65
 Identities = 118/184 (64%), Positives = 151/184 (82%)
 Frame = +2

Query: 8   ADGFASEPWKLCTIEQVEELKALIRVIPLWSTGIMIAVTISQHSFPVLQASTMDREVTSG 187
           +DG AS PW LCTIEQVEELKAL++VIPLWSTGIMI++ ISQ +F +LQAS+MDR ++S 
Sbjct: 192 SDGSASNPWSLCTIEQVEELKALLKVIPLWSTGIMISINISQSTFQLLQASSMDRHISSS 251

Query: 188 FSIPPGSYGVFGILTLTVWVAIYDRLLVPFLSRFTGNPRGLGLKQRMGIGLLISCLAMAV 367
           F IP GS+G+F I++L  WV +YDR ++P  S+  G P  LG K RMGIGL +SC+AM V
Sbjct: 252 FQIPAGSFGMFTIISLATWVILYDRAILPLASKIKGKPVQLGAKLRMGIGLFLSCMAMVV 311

Query: 368 SAMVEAERRKTAIKQGLLNNGSAIVNMSAMWLIPQHCLAGLSEAFNAIGQIDFYYSQFPK 547
           SA+VE+ RR+ AI++G LNN  A+++MSAMWL+PQ+CL GL+EAFNAIGQ +FYYS+FPK
Sbjct: 312 SAIVESIRRRKAIREGYLNNAHAVLDMSAMWLVPQYCLNGLAEAFNAIGQTEFYYSEFPK 371

Query: 548 SMSS 559
           SMSS
Sbjct: 372 SMSS 375


>ref|XP_002514272.1| nitrate transporter, putative [Ricinus communis]
           gi|223546728|gb|EEF48226.1| nitrate transporter,
           putative [Ricinus communis]
          Length = 595

 Score =  253 bits (646), Expect = 1e-65
 Identities = 119/186 (63%), Positives = 151/186 (81%)
 Frame = +2

Query: 2   LNADGFASEPWKLCTIEQVEELKALIRVIPLWSTGIMIAVTISQHSFPVLQASTMDREVT 181
           L++DG A +PW LCT++QVEELKAL++V+P+WSTGIMI+VT+SQ +FPVLQA TMDR   
Sbjct: 302 LDSDGLAVDPWNLCTVKQVEELKALMKVLPIWSTGIMISVTLSQQAFPVLQAETMDRRFI 361

Query: 182 SGFSIPPGSYGVFGILTLTVWVAIYDRLLVPFLSRFTGNPRGLGLKQRMGIGLLISCLAM 361
               IP GS+GVF ILTLT+WVAIYD++LVP +++ T  PRGL  KQRMG+GL +SCLA 
Sbjct: 362 GKAKIPAGSFGVFTILTLTIWVAIYDQVLVPRIAKITKRPRGLTNKQRMGMGLALSCLAT 421

Query: 362 AVSAMVEAERRKTAIKQGLLNNGSAIVNMSAMWLIPQHCLAGLSEAFNAIGQIDFYYSQF 541
           A++  VE +RR TA+ +GL +     VNMSAMWL+PQHCL GL+EA NAIGQI+FYYSQF
Sbjct: 422 AMAGAVEHQRRATALNEGLADKPKGQVNMSAMWLVPQHCLTGLAEALNAIGQIEFYYSQF 481

Query: 542 PKSMSS 559
           PK+M+S
Sbjct: 482 PKTMTS 487


>ref|XP_002279092.1| PREDICTED: probable peptide transporter At1g52190-like [Vitis
           vinifera]
          Length = 584

 Score =  253 bits (645), Expect = 2e-65
 Identities = 118/186 (63%), Positives = 150/186 (80%)
 Frame = +2

Query: 2   LNADGFASEPWKLCTIEQVEELKALIRVIPLWSTGIMIAVTISQHSFPVLQASTMDREVT 181
           +N+DG AS PW LCT++QVEELKALI+VIP+WSTGIM+++  S  SFPVLQA++MDR V 
Sbjct: 299 INSDGLASNPWSLCTVDQVEELKALIKVIPMWSTGIMMSINTSNSSFPVLQANSMDRHVF 358

Query: 182 SGFSIPPGSYGVFGILTLTVWVAIYDRLLVPFLSRFTGNPRGLGLKQRMGIGLLISCLAM 361
           S F IP GSY +F ++ L +WVA+YDR+++P  S+  G    LG+KQRMGIGL +SCL M
Sbjct: 359 SSFQIPAGSYAMFLVIVLFLWVALYDRVILPLASKVRGKRVRLGVKQRMGIGLFLSCLGM 418

Query: 362 AVSAMVEAERRKTAIKQGLLNNGSAIVNMSAMWLIPQHCLAGLSEAFNAIGQIDFYYSQF 541
            V+A+VE  RR+ AI+QGLLNN   +V MSAMWL+PQ+CL GL+EAFNAIGQ +FYYS+F
Sbjct: 419 VVAAIVENVRRRKAIRQGLLNNPQTLVGMSAMWLVPQYCLYGLAEAFNAIGQTEFYYSEF 478

Query: 542 PKSMSS 559
           PKSMSS
Sbjct: 479 PKSMSS 484


>emb|CBI36110.3| unnamed protein product [Vitis vinifera]
          Length = 622

 Score =  253 bits (645), Expect = 2e-65
 Identities = 118/186 (63%), Positives = 150/186 (80%)
 Frame = +2

Query: 2   LNADGFASEPWKLCTIEQVEELKALIRVIPLWSTGIMIAVTISQHSFPVLQASTMDREVT 181
           +N+DG AS PW LCT++QVEELKALI+VIP+WSTGIM+++  S  SFPVLQA++MDR V 
Sbjct: 299 INSDGLASNPWSLCTVDQVEELKALIKVIPMWSTGIMMSINTSNSSFPVLQANSMDRHVF 358

Query: 182 SGFSIPPGSYGVFGILTLTVWVAIYDRLLVPFLSRFTGNPRGLGLKQRMGIGLLISCLAM 361
           S F IP GSY +F ++ L +WVA+YDR+++P  S+  G    LG+KQRMGIGL +SCL M
Sbjct: 359 SSFQIPAGSYAMFLVIVLFLWVALYDRVILPLASKVRGKRVRLGVKQRMGIGLFLSCLGM 418

Query: 362 AVSAMVEAERRKTAIKQGLLNNGSAIVNMSAMWLIPQHCLAGLSEAFNAIGQIDFYYSQF 541
            V+A+VE  RR+ AI+QGLLNN   +V MSAMWL+PQ+CL GL+EAFNAIGQ +FYYS+F
Sbjct: 419 VVAAIVENVRRRKAIRQGLLNNPQTLVGMSAMWLVPQYCLYGLAEAFNAIGQTEFYYSEF 478

Query: 542 PKSMSS 559
           PKSMSS
Sbjct: 479 PKSMSS 484


Top