BLASTX nr result

ID: Coptis24_contig00016260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016260
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269530.2| PREDICTED: uncharacterized protein LOC100255...   136   6e-30
emb|CBI31947.3| unnamed protein product [Vitis vinifera]              127   3e-27
ref|XP_002312250.1| predicted protein [Populus trichocarpa] gi|2...   122   1e-25
ref|XP_003517998.1| PREDICTED: uncharacterized protein LOC100784...   114   3e-23
ref|XP_002315046.1| predicted protein [Populus trichocarpa] gi|2...   113   4e-23

>ref|XP_002269530.2| PREDICTED: uncharacterized protein LOC100255052 [Vitis vinifera]
          Length = 684

 Score =  136 bits (342), Expect = 6e-30
 Identities = 96/215 (44%), Positives = 121/215 (56%), Gaps = 22/215 (10%)
 Frame = +3

Query: 3    LNEQIEVQRHLQLRIEAQGMYLQSILMKAQETLAGYKSSSKRLEAAKTEVSELVSMVETR 182
            L+E IEVQRHLQLRIEAQG YLQS+L KAQETLAGY SSS  +E AK E+++LVS+ +T 
Sbjct: 472  LHEHIEVQRHLQLRIEAQGKYLQSVLKKAQETLAGYNSSSVGVELAKAELTQLVSIFDTG 531

Query: 183  CFNSSPSEFTKTGFFVLDNAGKKANRATDCXXXXXXXXXXXXGRKDGKQLQVERNASRSN 362
            C +SS SE T+TG   L +  +K  R T C            GRK+ KQ + E     +N
Sbjct: 532  CPSSSFSELTETGGSGLKDKERKPMRGTGCSLESSLTSSESSGRKEEKQPKNEN--GNTN 589

Query: 363  HC------------------YAGSSYSLAGRKRSGSTISDESSVDQPLTYIPPCDEEKP- 485
             C                   +GSS   +GRKR+GSTISD + V+QP     P    K  
Sbjct: 590  KCTSMAPTLMEIHPGDSQAWKSGSSNQASGRKRNGSTISDGNCVEQPSGKRSPTYAGKTG 649

Query: 486  CKLRKLA--EELDLNCKYQREF-MPRQELDLNYAE 581
             +LRKL   E LDLN +YQ +     + +DLN  E
Sbjct: 650  DRLRKLGLLETLDLNTQYQIDIDSAPKAIDLNCKE 684


>emb|CBI31947.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  127 bits (319), Expect = 3e-27
 Identities = 81/176 (46%), Positives = 101/176 (57%), Gaps = 18/176 (10%)
 Frame = +3

Query: 3   LNEQIEVQRHLQLRIEAQGMYLQSILMKAQETLAGYKSSSKRLEAAKTEVSELVSMVETR 182
           L+E IEVQRHLQLRIEAQG YLQS+L KAQETLAGY SSS  +E AK E+++LVS+ +T 
Sbjct: 123 LHEHIEVQRHLQLRIEAQGKYLQSVLKKAQETLAGYNSSSVGVELAKAELTQLVSIFDTG 182

Query: 183 CFNSSPSEFTKTGFFVLDNAGKKANRATDCXXXXXXXXXXXXGRKDGKQLQVERNASRSN 362
           C +SS SE T+TG   L +  +K  R T C            GRK+ KQ + E     +N
Sbjct: 183 CPSSSFSELTETGGSGLKDKERKPMRGTGCSLESSLTSSESSGRKEEKQPKNEN--GNTN 240

Query: 363 HC------------------YAGSSYSLAGRKRSGSTISDESSVDQPLTYIPPCDE 476
            C                   +GSS   +GRKR+GSTISD + V+QP      C E
Sbjct: 241 KCTSMAPTLMEIHPGDSQAWKSGSSNQASGRKRNGSTISDGNCVEQPSAIDLNCKE 296


>ref|XP_002312250.1| predicted protein [Populus trichocarpa] gi|222852070|gb|EEE89617.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score =  122 bits (306), Expect = 1e-25
 Identities = 77/165 (46%), Positives = 97/165 (58%), Gaps = 15/165 (9%)
 Frame = +3

Query: 3   LNEQIEVQRHLQLRIEAQGMYLQSILMKAQETLAGYKSSSKRLEAAKTEVSELVSMVETR 182
           L+EQIEVQRHLQLRIEAQG YLQ++L KAQETLAGY SSS  +E AK E+  LVSMV + 
Sbjct: 113 LHEQIEVQRHLQLRIEAQGKYLQTVLKKAQETLAGYNSSSMGIELAKAELCRLVSMVNSG 172

Query: 183 CFNSSPSEFTKTGFFVLDNAGKKANRATDCXXXXXXXXXXXXGRKDGKQLQVE-RNASRS 359
           C +SS SE T+TG  +L +  +   R T C            GRK+  Q + E  + ++S
Sbjct: 173 CPSSSISELTETGGSILKDIERTQMRNTVCSMESSLTSSESSGRKEDMQKENEIHDTNKS 232

Query: 360 NHCYA--------------GSSYSLAGRKRSGSTISDESSVDQPL 452
           N  +                +  S  G+KRSGS ISD  SV+QPL
Sbjct: 233 NTAFVELPLMDIHPQENLLDNDSSNQGKKRSGSIISDGVSVEQPL 277


>ref|XP_003517998.1| PREDICTED: uncharacterized protein LOC100784670 [Glycine max]
          Length = 339

 Score =  114 bits (284), Expect = 3e-23
 Identities = 81/211 (38%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
 Frame = +3

Query: 3   LNEQIEVQRHLQLRIEAQGMYLQSILMKAQETLAGYKSSSKRLEAAKTEVSELVSMVETR 182
           L+EQIEVQ+HLQLRIEAQG YLQS+L KAQE LAGY SS   +E  K E+S+LV+++   
Sbjct: 124 LHEQIEVQKHLQLRIEAQGKYLQSVLKKAQEALAGYNSSPVGIELTKAELSQLVTIINNA 183

Query: 183 CFNSSPSEFTKTGFFVLDNAGKKANRATDCXXXXXXXXXXXXGRKDGK------------ 326
           C +S  SE T+T    L    +K +R T C            GRK+ K            
Sbjct: 184 CPSSPISELTETRGLSLSCGERKRDRGTMCSLESSLTSSESSGRKEEKQPMEEIVEFKSS 243

Query: 327 -----QLQVERNASRSNHCYAGSSYSLAGRKRSGSTISDESSVDQPLTYIPPCDEEKPCK 491
                QL +    +       GSS   +GRKRS +    +   D       PC +    K
Sbjct: 244 INVSLQLPLMEILTEDKASNGGSSNEASGRKRSATAAESD---DGSCVVEQPCGKRCGNK 300

Query: 492 LR--KLAEELDLN--CKYQREFMPRQELDLN 572
           LR  KL+E LDLN  C+   +    + LDLN
Sbjct: 301 LRKAKLSEMLDLNSQCQSDMDSTSSKTLDLN 331


>ref|XP_002315046.1| predicted protein [Populus trichocarpa] gi|222864086|gb|EEF01217.1|
           predicted protein [Populus trichocarpa]
          Length = 338

 Score =  113 bits (283), Expect = 4e-23
 Identities = 75/165 (45%), Positives = 92/165 (55%), Gaps = 15/165 (9%)
 Frame = +3

Query: 3   LNEQIEVQRHLQLRIEAQGMYLQSILMKAQETLAGYKSSSKRLEAAKTEVSELVSMVETR 182
           L+EQIEVQRHLQLRIEAQG YLQS+L KAQETLAGY S S  +E AK E+S LVSM  + 
Sbjct: 155 LHEQIEVQRHLQLRIEAQGKYLQSVLKKAQETLAGYNSYSMGVELAKAELSRLVSMANSG 214

Query: 183 CFNSSPSEFTKTGFFVLDNAGKKANRATDCXXXXXXXXXXXXGRKDGKQLQVE-RNASRS 359
           C +SS S+ T+TG   L +  +   R+  C            GRK+  Q + E  +  +S
Sbjct: 215 CPSSSISDLTETGGSSLRDMERTQTRSAVCSMESSLTSSESSGRKEDMQQKNEIHDTEKS 274

Query: 360 NHCYAGSSY--------------SLAGRKRSGSTISDESSVDQPL 452
           N      S               S  G+KRSG  ISD  SV+QPL
Sbjct: 275 NTASVELSLMDIHPQDNPLNTCSSNQGKKRSGRIISDGVSVEQPL 319


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