BLASTX nr result

ID: Coptis24_contig00016257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016257
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518872.1| ATP-dependent transporter, putative [Ricinus...   100   2e-37
ref|XP_002263179.1| PREDICTED: ABC transporter F family member 3...   101   7e-37
ref|XP_004143864.1| PREDICTED: ABC transporter F family member 3...    99   2e-36
ref|XP_004161469.1| PREDICTED: ABC transporter F family member 3...    99   2e-36
ref|XP_002299447.1| ABC transporter family protein [Populus tric...    99   3e-36

>ref|XP_002518872.1| ATP-dependent transporter, putative [Ricinus communis]
           gi|223541859|gb|EEF43405.1| ATP-dependent transporter,
           putative [Ricinus communis]
          Length = 383

 Score =  100 bits (250), Expect(2) = 2e-37
 Identities = 48/57 (84%), Positives = 53/57 (92%)
 Frame = +3

Query: 123 YKGDYDTFERTREEQLKNQQKALESNEQKKAHMQGFIEKFRYNAKRALLVQSRIKLL 293
           YKGDYDTFERTREEQ+KNQQKALE+NE+ +AHMQ FI+KFRYNAKRA LVQSRIK L
Sbjct: 86  YKGDYDTFERTREEQVKNQQKALEANEKARAHMQSFIDKFRYNAKRASLVQSRIKAL 142



 Score = 80.1 bits (196), Expect(2) = 2e-37
 Identities = 37/40 (92%), Positives = 38/40 (95%)
 Frame = +1

Query: 1   ESYLVKWPKTFIVVSHAREFLNLVVTDILHLHGQKLTSYK 120
           ESYLVKWPKTFIVVSHAREFLN VVTDILHLHGQKL +YK
Sbjct: 48  ESYLVKWPKTFIVVSHAREFLNTVVTDILHLHGQKLNAYK 87


>ref|XP_002263179.1| PREDICTED: ABC transporter F family member 3 [Vitis vinifera]
           gi|297742399|emb|CBI34548.3| unnamed protein product
           [Vitis vinifera]
          Length = 716

 Score =  101 bits (252), Expect(2) = 7e-37
 Identities = 48/58 (82%), Positives = 53/58 (91%)
 Frame = +3

Query: 120 TYKGDYDTFERTREEQLKNQQKALESNEQKKAHMQGFIEKFRYNAKRALLVQSRIKLL 293
           +YKGDYDTFERTREEQLKNQQKA ESNE+ ++HMQ FI+KFRYNAKRA LVQSRIK L
Sbjct: 418 SYKGDYDTFERTREEQLKNQQKAFESNERSRSHMQSFIDKFRYNAKRAALVQSRIKAL 475



 Score = 77.4 bits (189), Expect(2) = 7e-37
 Identities = 36/40 (90%), Positives = 37/40 (92%)
 Frame = +1

Query: 1   ESYLVKWPKTFIVVSHAREFLNLVVTDILHLHGQKLTSYK 120
           E+YLVKWPKT IVVSHAREFLN VVTDILHLHGQKL SYK
Sbjct: 381 ETYLVKWPKTVIVVSHAREFLNTVVTDILHLHGQKLNSYK 420


>ref|XP_004143864.1| PREDICTED: ABC transporter F family member 3-like [Cucumis sativus]
          Length = 710

 Score = 98.6 bits (244), Expect(2) = 2e-36
 Identities = 47/58 (81%), Positives = 53/58 (91%)
 Frame = +3

Query: 120 TYKGDYDTFERTREEQLKNQQKALESNEQKKAHMQGFIEKFRYNAKRALLVQSRIKLL 293
           TYKG+YDTFERTREEQLKNQQKA E+NE+ ++HMQ FI+KFRYNAKRA LVQSRIK L
Sbjct: 412 TYKGNYDTFERTREEQLKNQQKAFEANERTRSHMQTFIDKFRYNAKRASLVQSRIKAL 469



 Score = 79.0 bits (193), Expect(2) = 2e-36
 Identities = 37/40 (92%), Positives = 38/40 (95%)
 Frame = +1

Query: 1   ESYLVKWPKTFIVVSHAREFLNLVVTDILHLHGQKLTSYK 120
           ESYLVKWPKTFIVVSHAREFLN VVTDILHL GQKLT+YK
Sbjct: 375 ESYLVKWPKTFIVVSHAREFLNTVVTDILHLQGQKLTTYK 414


>ref|XP_004161469.1| PREDICTED: ABC transporter F family member 3-like [Cucumis sativus]
          Length = 519

 Score = 98.6 bits (244), Expect(2) = 2e-36
 Identities = 47/58 (81%), Positives = 53/58 (91%)
 Frame = +3

Query: 120 TYKGDYDTFERTREEQLKNQQKALESNEQKKAHMQGFIEKFRYNAKRALLVQSRIKLL 293
           TYKG+YDTFERTREEQLKNQQKA E+NE+ ++HMQ FI+KFRYNAKRA LVQSRIK L
Sbjct: 221 TYKGNYDTFERTREEQLKNQQKAFEANERTRSHMQTFIDKFRYNAKRASLVQSRIKAL 278



 Score = 79.0 bits (193), Expect(2) = 2e-36
 Identities = 37/40 (92%), Positives = 38/40 (95%)
 Frame = +1

Query: 1   ESYLVKWPKTFIVVSHAREFLNLVVTDILHLHGQKLTSYK 120
           ESYLVKWPKTFIVVSHAREFLN VVTDILHL GQKLT+YK
Sbjct: 184 ESYLVKWPKTFIVVSHAREFLNTVVTDILHLQGQKLTTYK 223


>ref|XP_002299447.1| ABC transporter family protein [Populus trichocarpa]
           gi|222846705|gb|EEE84252.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 716

 Score = 98.6 bits (244), Expect(2) = 3e-36
 Identities = 46/57 (80%), Positives = 53/57 (92%)
 Frame = +3

Query: 123 YKGDYDTFERTREEQLKNQQKALESNEQKKAHMQGFIEKFRYNAKRALLVQSRIKLL 293
           YKGDYDTFERTREEQ+KNQ+KA+E+NE+ +AHMQ FI+KFRYNAKRA LVQSRIK L
Sbjct: 419 YKGDYDTFERTREEQIKNQRKAIEANEKSRAHMQTFIDKFRYNAKRASLVQSRIKAL 475



 Score = 78.6 bits (192), Expect(2) = 3e-36
 Identities = 37/40 (92%), Positives = 37/40 (92%)
 Frame = +1

Query: 1   ESYLVKWPKTFIVVSHAREFLNLVVTDILHLHGQKLTSYK 120
           ESYLVKWPKTFIVVSHAREFLN VVTDILHL GQKLT YK
Sbjct: 381 ESYLVKWPKTFIVVSHAREFLNTVVTDILHLQGQKLTGYK 420