BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016254
         (2418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521705.1| poly(A) polymerase, putative [Ricinus commun...   526   e-146
ref|XP_002307206.1| predicted protein [Populus trichocarpa] gi|2...   474   e-131
ref|XP_003516528.1| PREDICTED: uncharacterized protein LOC100794...   470   e-130
ref|XP_003612324.1| Poly(A) polymerase [Medicago truncatula] gi|...   456   e-125
ref|NP_179349.2| polynucleotide adenylyltransferase-like protein...   452   e-124

>ref|XP_002521705.1| poly(A) polymerase, putative [Ricinus communis]
            gi|223539096|gb|EEF40692.1| poly(A) polymerase, putative
            [Ricinus communis]
          Length = 675

 Score =  526 bits (1355), Expect = e-146
 Identities = 267/492 (54%), Positives = 349/492 (70%), Gaps = 1/492 (0%)
 Frame = +2

Query: 116  LSNFQRLNHTLARDIQNAHCHTSQTSRDSIVDDYVDKRKWRVVDSRIARVDRKKVSPESH 295
            L+  QR NH+L           S  S+D      +D  KW+ +++    + R  + P   
Sbjct: 18   LTTLQRFNHSLIEQTPLYPRMISSDSKDQ-QSTVIDISKWKKINASAVGIKRSMIPPSPW 76

Query: 296  TILHILRMKGFKAYLVGGCVRDLLLDRIPKDFDVVTNANLKQIKKQFHRSQIVGKRFPIC 475
             +L IL  KGF+AYLVGGCVRDLLL+RIPKDFDV+T A LKQ+KKQFHR +IVG+RFPIC
Sbjct: 77   LVLKILHNKGFEAYLVGGCVRDLLLNRIPKDFDVITTAKLKQVKKQFHRCEIVGRRFPIC 136

Query: 476  HVFIKGSRIEVSSFDTVDTVADGKGTVFPSQRPTGCNKEDFVRWKDCLRRDFTINSLFYD 655
             V +KGS +EVSSF+TV    +GK  V  SQ+P+GCN  DF+RW++ + RDFTINSLF+D
Sbjct: 137  RVHVKGSVVEVSSFETVAQHNEGKEEVLISQKPSGCNGRDFIRWRNSMHRDFTINSLFFD 196

Query: 656  PSANKIYDYANGMRDLKLCKVQTVIPARVSFKEDCARILRGVRIAARLGLSFSKETAAAI 835
            P  N+I+DYANGM DL   K++TVIPAR+SF+EDCARILRG+RIA RLGLS SK+T +AI
Sbjct: 197  PFMNQIFDYANGMADLSFLKLRTVIPARLSFQEDCARILRGLRIAGRLGLSISKDTESAI 256

Query: 836  QDLYMSILDMDKARVMLEMDYMLSYGSAKSSLSLLKRFKILDIVLPFHAAYLSAEAHDQT 1015
            + L  S+  +DKAR+M+E++YMLSYG+A+S++ LL+RF +L++ LPFHAAYLS +A +  
Sbjct: 257  RKLSSSVKSLDKARIMMELNYMLSYGAAESTIYLLQRFNLLELFLPFHAAYLSQQAGETF 316

Query: 1016 AQGSPMLFKLFASMDKLFASNRPSIPTVWVGVLAFHLALVNNPQDALVVWALSSIFYHGN 1195
            + GS ML KLF ++D L + +RP   ++WVG+LAFH ALV NPQDALV W  +S+ YHG 
Sbjct: 317  SLGSVMLMKLFFNLDTLVSCDRPCTSSLWVGLLAFHQALVTNPQDALVSWVFASVLYHGK 376

Query: 1196 WKEAVEFAREKSKTHVDFSPEISQSCSNKSDKALAEDVKQFASQVISSIDALTEPQSLFL 1375
            WK+ VEFARE +K  V F+PEIS     KSD+ LAE+V   AS V  S+DAL +  +L  
Sbjct: 377  WKDGVEFARENAKMQVKFAPEISGFSEFKSDEELAEEVSHLASLVQDSVDALMDTDTLAQ 436

Query: 1376 SMERYPLYPCFGSVFISKHMGRTVAELFEVLLDDVDE-SQNRSCFEIDYELLKQGNHGEI 1552
            SM R+ +    G VF+SK +   VA+LF VL+DDV+     R  F IDY LL +GN  E 
Sbjct: 437  SMSRFGVTSSSGLVFVSKKIANDVAQLFNVLVDDVESYKTERESFMIDYYLLGKGNQHET 496

Query: 1553 RFVLGKVIMDTL 1588
            RFVLGKVI++TL
Sbjct: 497  RFVLGKVILETL 508


>ref|XP_002307206.1| predicted protein [Populus trichocarpa] gi|222856655|gb|EEE94202.1|
            predicted protein [Populus trichocarpa]
          Length = 458

 Score =  474 bits (1219), Expect = e-131
 Identities = 247/457 (54%), Positives = 326/457 (71%)
 Frame = +2

Query: 218  VDKRKWRVVDSRIARVDRKKVSPESHTILHILRMKGFKAYLVGGCVRDLLLDRIPKDFDV 397
            VD+ KWR V++R   + R  +     T+L +LR+ GF+AYLVGGCVRDLLL+R+PKDFDV
Sbjct: 1    VDRSKWRKVNARYHGITRSMIPDAPWTVLKLLRVGGFEAYLVGGCVRDLLLNRVPKDFDV 60

Query: 398  VTNANLKQIKKQFHRSQIVGKRFPICHVFIKGSRIEVSSFDTVDTVADGKGTVFPSQRPT 577
            +T ANL+QIKK+FHR+ IVG+RFPIC V +KGS IEVSSF+T       K  V  SQ   
Sbjct: 61   ITTANLQQIKKKFHRAHIVGRRFPICIVHVKGSVIEVSSFETSAQQCQEKEKVLLSQMRR 120

Query: 578  GCNKEDFVRWKDCLRRDFTINSLFYDPSANKIYDYANGMRDLKLCKVQTVIPARVSFKED 757
             C+++DF+ WK+ ++RDFTINSLF+DP  N+IYDYANGM D++  K+QT+IPAR+SF+ED
Sbjct: 121  SCDEKDFLLWKNSMQRDFTINSLFFDPFMNRIYDYANGMEDVRSLKLQTLIPARLSFQED 180

Query: 758  CARILRGVRIAARLGLSFSKETAAAIQDLYMSILDMDKARVMLEMDYMLSYGSAKSSLSL 937
            CARILRG+RIA RLGLS SK+T  AI  L  S+  ++K R+ +E++YMLSYG+A+S++ L
Sbjct: 181  CARILRGIRIAGRLGLSISKDTETAICKLQSSVKSLNKDRIKMELNYMLSYGAAESTILL 240

Query: 938  LKRFKILDIVLPFHAAYLSAEAHDQTAQGSPMLFKLFASMDKLFASNRPSIPTVWVGVLA 1117
            L+RF +L I LPFHAAYL  +A + +AQGS ML KL  S+DK+ +S+RP   ++WVG+LA
Sbjct: 241  LQRFHLLKIFLPFHAAYLHEQADEVSAQGSTMLMKLLYSLDKIVSSDRPCDCSLWVGLLA 300

Query: 1118 FHLALVNNPQDALVVWALSSIFYHGNWKEAVEFAREKSKTHVDFSPEISQSCSNKSDKAL 1297
            FH ALV NPQDA V+WA +SI Y G W+E V+FARE +K    F PEIS     KSD+ L
Sbjct: 301  FHQALVLNPQDAFVIWAFASILYCGTWQEGVKFARENAKVEGRFVPEISGFSEIKSDEKL 360

Query: 1298 AEDVKQFASQVISSIDALTEPQSLFLSMERYPLYPCFGSVFISKHMGRTVAELFEVLLDD 1477
            AE+V Q AS V  +++A T+  SL  S+ RY   P    VF+SK +G     LF +   +
Sbjct: 361  AEEVSQLASLVQDAVNAFTDEISLSESLSRYLDPPLDVFVFVSKKIGEHAGLLFHMQSCE 420

Query: 1478 VDESQNRSCFEIDYELLKQGNHGEIRFVLGKVIMDTL 1588
                  R  F+IDY+LL +G+  E RFVLGKVI+ TL
Sbjct: 421  ----YRRESFKIDYDLLVKGDLYETRFVLGKVILKTL 453


>ref|XP_003516528.1| PREDICTED: uncharacterized protein LOC100794882 [Glycine max]
          Length = 714

 Score =  470 bits (1209), Expect = e-130
 Identities = 280/719 (38%), Positives = 430/719 (59%), Gaps = 24/719 (3%)
 Frame = +2

Query: 95   ISRLQALLSNFQRLNHTLARDIQNAHCHTSQTSRD-SIVDDYVDKRKWRVVDSRIARVDR 271
            ++RL+ L+++  +  H+ A         +++   D S+    +D  KW+ +D+    +  
Sbjct: 9    LTRLKTLVNSHSQGFHSPAPKRPKQDPSSTENDLDYSVCRGRIDVSKWKTLDAEELGITS 68

Query: 272  KKVSPESHTILHILRMKGFKAYLVGGCVRDLLLDRIPKDFDVVTNANLKQIKKQFH---R 442
              +S  S  +L +LR KGF++YLVGGCVRDLLL+R PKDFDV+T A L +++ QF    R
Sbjct: 69   SMISYPSQFVLKLLRRKGFESYLVGGCVRDLLLNRTPKDFDVITTAKLMEVRAQFRGLAR 128

Query: 443  SQIVGKRFPICHVFIKGSRIEVSSFDTVDTVADGKGTVFPSQRPTGCNKEDFVRWKDCLR 622
            +++VG+RFPIC V IKGS +EV+SF+TV   ++ K     S  P   NK+D  R K+ LR
Sbjct: 129  AEVVGRRFPICLVHIKGSVVEVTSFETVARTSNRKEQFLYSLLPKCSNKKDLFRCKNSLR 188

Query: 623  RDFTINSLFYDPSANKIYDYANGMRDLKLCKVQTVIPARVSFKEDCARILRGVRIAARLG 802
            RDFTINSLFYDP ANKIYDY +GM DL+  K++TVIPA++SFKED  RILRG RIAARLG
Sbjct: 189  RDFTINSLFYDPFANKIYDYTDGMADLRSLKLETVIPAQMSFKEDPGRILRGFRIAARLG 248

Query: 803  LSFSKETAAAIQDLYMSILDMDKARVMLEMDYMLSYGSAKSSLSLLKRFKILDIVLPFHA 982
            LS S+ET AA+      +  +DK ++M+E++YMLSYG+A+ SL LL +FK+L+ +LP HA
Sbjct: 249  LSLSRETEAAMWKYSSLVKSLDKNKIMIELNYMLSYGAAEPSLHLLWKFKLLEFLLPVHA 308

Query: 983  AYLSAEAHDQTAQGSPMLFKLFASMDKLFASNRPSIPTVWVGVLAFHLALVNNPQDALVV 1162
            AYL  +A  + A  S ML KLF  +D L A +RP   T+WVG+LAFHL LVNNPQDALVV
Sbjct: 309  AYLDEQAIKEDAPASNMLMKLFFYLDNLVACDRPCDCTLWVGLLAFHLTLVNNPQDALVV 368

Query: 1163 WALSSIFYHGNWKEAVEFAREKSKTHVDFSPEISQSCSNKSDKALAEDVKQFASQVISSI 1342
            WA +S+ YHG W++ ++FA+E +K +V+F+PEI  S   KSD+ +A+ V + AS V+ SI
Sbjct: 369  WAFASVLYHGEWEKGIKFAKEHAKMYVNFAPEIRTSSIYKSDEEIAKAVTKLASLVMHSI 428

Query: 1343 DALTEPQSLFLSMERYPLYPCFGSVFISKHMGRTVAELFEVLLDDVD--ESQNRSCFEID 1516
             AL E  SL  SM RYP +P    +F+ K  G+  + +F++L  DV+  +++ R   +I+
Sbjct: 429  PALVESNSLLQSMSRYPSFPQSDMIFVPKKAGKLASAIFKMLASDVEFYKTERRKNSKIN 488

Query: 1517 YELLKQGNHGEIRFVLGKVIMDTLGSVSIHDQLQELQHLPLSHSDKQQKVIGEEMCKITS 1696
            Y +L +G+  EI FVLGK++++T+ S ++ D  ++ +        +  K I +   ++  
Sbjct: 489  YGMLGKGHLSEIAFVLGKIVLETMSSGTVGDG-EDSEAGQCHLKTEGTKEIAQS--QLPD 545

Query: 1697 RLNRRKVFENEKEHSPGY-NNNCQVGKEEKQR--------SQKSNIGIISVSHLEHKRKV 1849
             +N      N + H     N+ C+ GK +K++         +K + G   +S     ++ 
Sbjct: 546  LVNHEVAAMNGEGHLLSIPNSECRQGKSKKRKLVKNRCIAKKKMSSGNQELSEKFEYKEN 605

Query: 1850 GSEETSCLMISHLEQRQVDGNKKDHLQNSNSNKRKEVFEREKDGSIKLDIDTISSSHVEQ 2029
              E+   + +S    ++VD + +D L    ++ RK++    K       I + + S + Q
Sbjct: 606  KEEQQKLVKLS----QKVDMSTEDSLPKKKNDHRKQLISDRK------KITSANKSFLHQ 655

Query: 2030 STEV-VKKDNSFLISSHPVQERD--MAETDCPQN------SNTRKLLKVFERCQMYSWK 2179
            +  +   +D++ + S   V E    +A ++   N      SN +K  K     +M+  K
Sbjct: 656  AKHMKTDEDSTCMPSQSTVSENHQVIANSNIDVNAKTTNESNLKKKKKGLSLVEMFKGK 714


>ref|XP_003612324.1| Poly(A) polymerase [Medicago truncatula] gi|355513659|gb|AES95282.1|
            Poly(A) polymerase [Medicago truncatula]
          Length = 675

 Score =  456 bits (1174), Expect = e-125
 Identities = 268/627 (42%), Positives = 381/627 (60%), Gaps = 13/627 (2%)
 Frame = +2

Query: 218  VDKRKWRVVDSRIARVDRKKVSPESHTILHILRMKGFKAYLVGGCVRDLLLDRIPKDFDV 397
            +D   W+  D+    V    +S  SH +L +L+ KG K+YLVGGCVRDL+L+R PKDFDV
Sbjct: 16   IDISNWKTFDAWKLGVTGSMISKPSHFVLKLLQDKGLKSYLVGGCVRDLVLNRTPKDFDV 75

Query: 398  VTNANLKQIKKQF----HRSQIVGKRFPICHVFIKGSRIEVSSFDTVDTVADGKGTVFPS 565
            VT A L ++K+ F    HR+ +VG+RFP+C V ++GS IEV+SF T          V  S
Sbjct: 76   VTTAKLIEVKRLFRRFGHRADVVGRRFPVCLVHMQGSVIEVTSFHTESETPKAMKNVLHS 135

Query: 566  QRPTGCNKEDFVRWKDCLRRDFTINSLFYDPSANKIYDYANGMRDLKLCKVQTVIPARVS 745
              P   NKE+    K+ LRRDFTINSLFYDP ANKIYDYANGM DL+  K++TVIPA++S
Sbjct: 136  LMPKCKNKENRFLCKNSLRRDFTINSLFYDPFANKIYDYANGMADLRSLKLETVIPAQIS 195

Query: 746  FKEDCARILRGVRIAARLGLSFSKETAAAIQDLYMSILDMDKARVMLEMDYMLSYGSAKS 925
            FKED  RILRG RIAARLGLS S+E  AAI      + D++K R+M+EM+YMLSYG+A+ 
Sbjct: 196  FKEDPGRILRGFRIAARLGLSLSREIEAAIWTCSSLVEDLNKDRMMIEMNYMLSYGAAEP 255

Query: 926  SLSLLKRFKILDIVLPFHAAYLSAEAHDQTAQGSPMLFKLFASMDKLFASNRPSIPTVWV 1105
            SL LL +FK+L  +LP  AAYL  +A  + AQ S ML KLF  MD L    RPS  T+W+
Sbjct: 256  SLRLLWKFKLLQFLLPVQAAYLDEQATKEDAQDSNMLMKLFFHMDNLVGCGRPSDCTLWI 315

Query: 1106 GVLAFHLALVNNPQDALVVWALSSIFYHGNWKEAVEFAREKSKTHVDFSPEISQSCSNKS 1285
            G+LAFHLALVNNPQDALVVWA +S+ YHG+W+  ++FA+E +K  V+F PEI +S   KS
Sbjct: 316  GLLAFHLALVNNPQDALVVWAFASVLYHGDWEGGIKFAKEHAKMSVNFEPEIKRSSICKS 375

Query: 1286 DKALAEDVKQFASQVISSIDALTEPQSLFLSMERYPLYPCFGSVF-ISKHMGRTVAELFE 1462
            D+ +AE V + AS VI SI  L   +SL  S+ RYP  P    V  +SK  G+ V+E+FE
Sbjct: 376  DEDIAEAVTKLASLVIDSIHPLVNIESLSQSLSRYPSVPPPHMVLVVSKKTGKAVSEIFE 435

Query: 1463 VLLDDVD-ESQNRSCFEIDYELLKQGNHGEIRFVLGKVIMDTLGSVSIHDQLQELQHLPL 1639
            VL++D+      R   +I+Y++L  G+  E RFVLGK+++ T+ S  I D   +      
Sbjct: 436  VLVNDIKFYKSERKSAKINYDMLGSGHTSETRFVLGKIVLQTMQSGIIGD--ADGFGTEK 493

Query: 1640 SHSDKQQKVIGEEMCKITSRLNRRKVFENEK-EHSPGYNNNCQVGKE---EKQRSQKSNI 1807
             H D +     ++  ++ +R ++RKV      EH P      ++ +    E+Q++     
Sbjct: 494  CHPDTEGT---KDFGQLVTREDKRKVLSTPNLEHRPQKLKKQKLAENACIEEQKTGLDEF 550

Query: 1808 GIISVSHLEHKRKVGSEETSCLMISHLEQRQVDGNKKDHLQNSNSNKRKEVFEREK---D 1978
                 ++ EH++ V   +   L + +   +     +K  + +   N  K++    K   D
Sbjct: 551  CKYKETNEEHQKPVKLHQEVHLSMVNSMPKNKSNKRKQLINDEKKNDDKKIARASKTSTD 610

Query: 1979 GSIKLDIDTISSSHVEQSTEVVKKDNS 2059
             +  L+IDT + S + ++  V+  +++
Sbjct: 611  YAKHLNIDTSAQSTMSKNHPVIANNHN 637


>ref|NP_179349.2| polynucleotide adenylyltransferase-like protein [Arabidopsis
            thaliana] gi|330251561|gb|AEC06655.1| polynucleotide
            adenylyltransferase-like protein [Arabidopsis thaliana]
          Length = 757

 Score =  452 bits (1162), Expect = e-124
 Identities = 267/695 (38%), Positives = 406/695 (58%), Gaps = 24/695 (3%)
 Frame = +2

Query: 104  LQALLSNFQRLNHTLARDIQNAHCHTSQTSRDSIVDDYVDKRKWRVVDSRIARVDRKKVS 283
            L A+ S  QR N TLA           Q   + I  + VD  KW+ V +  A +    + 
Sbjct: 18   LAAVYSKLQRSNCTLAEGFMEKCSSIRQVIDEDI--NSVDTSKWKKVRASDAGIKNSMIP 75

Query: 284  PESHTILHILRMKGFKAYLVGGCVRDLLLDRIPKDFDVVTNANLKQIKKQFHRSQIVGKR 463
              S  +L +LR +GF AYLVGGCVRDL+L+R+PKD+DV+T A+LKQI++ FHR+Q++GKR
Sbjct: 76   ESSMNVLRLLRRQGFDAYLVGGCVRDLILNRVPKDYDVITTADLKQIRRLFHRAQVIGKR 135

Query: 464  FPICHVFIKGSRIEVSSFDTV------------------DTVADGKGTVFPSQRPTGCNK 589
            FPICHV++ GS IEVSSFDTV                  DT A+   ++F     +G + 
Sbjct: 136  FPICHVWMGGSIIEVSSFDTVAHSDSDLEKSKEKSGVSLDTKANKNNSLFKMY--SGWDI 193

Query: 590  EDFVRWKDCLRRDFTINSLFYDPSANKIYDYANGMRDLKLCKVQTVIPARVSFKEDCARI 769
            +D  RW++ L+RDFTINSLFY+P    IYDYANGM DL   K++T++PA +SFKEDCARI
Sbjct: 194  KDCKRWRNSLQRDFTINSLFYNPFDFTIYDYANGMEDLTDLKLRTLVPAHLSFKEDCARI 253

Query: 770  LRGVRIAARLGLSFSKETAAAIQDLYMSILDMDKARVMLEMDYMLSYGSAKSSLSLLKRF 949
            LRG+RIAARLGLS SK+   AI +   S+ ++D+ R+++EM+YML+YG+A  S+ LL +F
Sbjct: 254  LRGLRIAARLGLSLSKDVKTAIPEFVSSVANLDQFRLIMEMNYMLAYGAAAPSILLLMKF 313

Query: 950  KILDIVLPFHAAYLSAEAHDQTAQGSPMLFKLFASMDKLFASNRPSIPTVWVGVLAFHLA 1129
            K+L ++LPF AAYL  +A   +   S ML +LF++MDKL + ++P+ P +W+ VLAFH+A
Sbjct: 314  KLLHVLLPFQAAYLD-QASKTSLSSSLMLVRLFSNMDKLVSCDQPADPKLWIAVLAFHIA 372

Query: 1130 LVNNPQDALVVWALSSIFYHGNWKEAVEFAREKSKTHVDFSPEISQSCSNKSDKALAEDV 1309
            LV NPQ+A+VV A +++ YHGNW +AVEFARE   + + ++PE+S+S   +SD+ LAE V
Sbjct: 373  LVRNPQEAIVVRAFAALLYHGNWSKAVEFAREHETSVIGYAPEVSKSSRKRSDEDLAEAV 432

Query: 1310 KQFASQVISSIDALTEPQSLFLSMERYPLYPCFGSVFISKHMGRTVAELFEVLLDDVDES 1489
             +F   +  +   LT+ ++L  ++  YP +   G VFI K  GR VAE F  L D     
Sbjct: 433  SEFTCLLKDTQYVLTDKEALREALYLYPDFKFSGLVFIPKKKGRDVAEGFMRLSDVESYE 492

Query: 1490 QNRSCFEIDYELLKQGNHGEIRFVLGKVIMDTLGSVSIHDQLQELQHLPLSHSDKQQKVI 1669
              +  F IDY LL +GN  E+RFVLGK+I+DT+   ++   ++ L  +    S +   V 
Sbjct: 493  SQKEGFSIDYVLLGKGNPCEVRFVLGKIILDTITEGTV---IEPLNSVKKKQSTRNHIVP 549

Query: 1670 GEEMCKITSRLNRRKVFENEKEHSPGYNNNC----QVGKEEKQRSQKSNIGIISVSHLEH 1837
               + K       +   E+    +P +++N     ++ K  ++ S+++N     V     
Sbjct: 550  AACLEKKDELFVSKSSKEDNNNQTPVHDSNASSVLKILKRTREDSEQNNDQETEVCPRTP 609

Query: 1838 KRKVGSEETSCLMISHLEQRQVDGNKKDHLQNSNSNKRKEVFEREKDGSIKL--DIDTIS 2011
                 +++ S  ++  L++R+             ++KR    ++E  GS+ +   I   S
Sbjct: 610  SGPAKNQDQS--VVQMLKRRRSKEAPVSEPPKQKTSKRSRSDDQEAVGSLSVPAKIQHQS 667

Query: 2012 SSHVEQSTEVVKKDNSFLISSHPVQERDMAETDCP 2116
            + H + +  + +        +H  + R +   D P
Sbjct: 668  NKH-DTNAPICELPKQKTSKNHSKESRKVKHNDLP 701