BLASTX nr result

ID: Coptis24_contig00016232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016232
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17902.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002263344.1| PREDICTED: uncharacterized protein LOC100263...   110   2e-22
ref|XP_002530843.1| conserved hypothetical protein [Ricinus comm...   105   4e-21
ref|XP_002314010.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002298459.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17

>emb|CBI17902.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  110 bits (274), Expect = 2e-22
 Identities = 68/141 (48%), Positives = 88/141 (62%), Gaps = 13/141 (9%)
 Frame = -2

Query: 513 SSADINSEGRWKVAKAWNPCPIGMLPCALGSTGVLPVLDRVVILPEVQKLP----GGKES 346
           ++ D  +  RW VAK+WNPCPIGMLP ALGS+G LP LD      + QK+P      +E 
Sbjct: 411 TNGDDGNHSRWVVAKSWNPCPIGMLPRALGSSGRLPALDH----NDNQKMPPESSERREL 466

Query: 345 WELNTCS---GMTYDVGLLEKTNAIEERNAVED-----GQADDPDL-LLNPVKGQLMIGG 193
           WEL  CS      +D+ +L+ ++  + R  VED       +DD D+ L   VKGQL+I G
Sbjct: 467 WELKHCSRKREACFDIEMLDNSSVKKMRETVEDQTIEGHDSDDKDVTLCEGVKGQLLING 526

Query: 192 VYKKVWAEELLAIESAVRILV 130
           V+KKV  EELLAI+SAVRILV
Sbjct: 527 VWKKVEREELLAIKSAVRILV 547


>ref|XP_002263344.1| PREDICTED: uncharacterized protein LOC100263330 [Vitis vinifera]
          Length = 597

 Score =  110 bits (274), Expect = 2e-22
 Identities = 68/141 (48%), Positives = 88/141 (62%), Gaps = 13/141 (9%)
 Frame = -2

Query: 513 SSADINSEGRWKVAKAWNPCPIGMLPCALGSTGVLPVLDRVVILPEVQKLP----GGKES 346
           ++ D  +  RW VAK+WNPCPIGMLP ALGS+G LP LD      + QK+P      +E 
Sbjct: 461 TNGDDGNHSRWVVAKSWNPCPIGMLPRALGSSGRLPALDH----NDNQKMPPESSERREL 516

Query: 345 WELNTCS---GMTYDVGLLEKTNAIEERNAVED-----GQADDPDL-LLNPVKGQLMIGG 193
           WEL  CS      +D+ +L+ ++  + R  VED       +DD D+ L   VKGQL+I G
Sbjct: 517 WELKHCSRKREACFDIEMLDNSSVKKMRETVEDQTIEGHDSDDKDVTLCEGVKGQLLING 576

Query: 192 VYKKVWAEELLAIESAVRILV 130
           V+KKV  EELLAI+SAVRILV
Sbjct: 577 VWKKVEREELLAIKSAVRILV 597


>ref|XP_002530843.1| conserved hypothetical protein [Ricinus communis]
           gi|223529607|gb|EEF31556.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 589

 Score =  105 bits (262), Expect = 4e-21
 Identities = 62/150 (41%), Positives = 84/150 (56%), Gaps = 22/150 (14%)
 Frame = -2

Query: 513 SSADINSEGRWKVAKAWNPCPIGMLPCALGSTGVLPVLDRVVILPEVQKLPGGKESWELN 334
           +  D+    RW VAK+WNPCPIGMLP  LGS+G LP LD   +  E+  L G   +WEL 
Sbjct: 442 ADGDLKGGDRWAVAKSWNPCPIGMLPRDLGSSGCLPDLDHHYVDKELVNLSG--RTWELK 499

Query: 333 TCSGM---------------------TYDVGLLEKTNAIEERNAVEDGQADDPDLLL-NP 220
            C G+                     +YD+ LL++++  + R  VE  ++   D LL   
Sbjct: 500 QCGGVEEPSSDIHSNNSQVERSKREASYDICLLDRSSVKKMREMVESYESGGKDALLPTD 559

Query: 219 VKGQLMIGGVYKKVWAEELLAIESAVRILV 130
           +KG LMI GV+KK+  EELLAI+S +RILV
Sbjct: 560 IKGCLMINGVWKKIEEEELLAIKSGIRILV 589


>ref|XP_002314010.1| predicted protein [Populus trichocarpa] gi|222850418|gb|EEE87965.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 60/139 (43%), Positives = 79/139 (56%), Gaps = 11/139 (7%)
 Frame = -2

Query: 513 SSADINSEGRWKVAKAWNPCPIGMLPCALGSTGVLPVLDRVVILPEVQKLPGGKESWEL- 337
           +  D+ S GRW VAK+WNPCPIGMLP  LGS+G LPVLD      +       K+ WEL 
Sbjct: 479 TDGDVGSSGRWIVAKSWNPCPIGMLPRDLGSSGCLPVLDCDDDGKKSVHASERKQIWELK 538

Query: 336 ---------NTCSGMTYDVGLLEKTNAIEERNAVEDGQADDPDLLLN-PVKGQLMIGGVY 187
                     +      D+ LL+K +  + R   +  +++  ++LL+   KG LMI GV+
Sbjct: 539 QYYTSVERTGSKREADSDIYLLDKASVKKMRETADSFESEGENVLLSKDDKGCLMINGVW 598

Query: 186 KKVWAEELLAIESAVRILV 130
           KKV  EELLAI S VRILV
Sbjct: 599 KKVGEEELLAIMSDVRILV 617


>ref|XP_002298459.1| predicted protein [Populus trichocarpa] gi|222845717|gb|EEE83264.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 61/146 (41%), Positives = 82/146 (56%), Gaps = 18/146 (12%)
 Frame = -2

Query: 513 SSADINSEGRWKVAKAWNPCPIGMLPCALGSTGVLPVLDRVVILPEVQKLPGGKESWELN 334
           +  ++ S G W VAK+WNPCPIGMLP  LGS+G LPVLD      +       K+SWEL 
Sbjct: 481 TDGEVGSSGGWAVAKSWNPCPIGMLPRDLGSSGHLPVLDCADDGKKPVHSSEWKQSWELK 540

Query: 333 TCSG----MTY-------------DVGLLEKTNAIEERNAVEDGQADDPDLLLN-PVKGQ 208
             S      +Y             D+ LL+K++A + R   +  ++D  ++LL+   KG 
Sbjct: 541 QGSSGDIRFSYGVERTSSKREAGCDIYLLDKSSAKKMRETADSFESDCENVLLSGDDKGC 600

Query: 207 LMIGGVYKKVWAEELLAIESAVRILV 130
           LMI GV+KK+  EELL I S VRILV
Sbjct: 601 LMINGVWKKIGEEELLTIMSDVRILV 626


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