BLASTX nr result

ID: Coptis24_contig00016227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016227
         (1198 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277868.1| PREDICTED: uncharacterized protein LOC100244...   209   1e-51
ref|XP_002281496.1| PREDICTED: uncharacterized protein LOC100263...   205   2e-50
ref|XP_003521353.1| PREDICTED: uncharacterized protein LOC100810...   192   1e-46
ref|XP_003554336.1| PREDICTED: uncharacterized protein LOC100786...   192   2e-46
ref|XP_003542473.1| PREDICTED: uncharacterized protein LOC100813...   191   2e-46

>ref|XP_002277868.1| PREDICTED: uncharacterized protein LOC100244737 [Vitis vinifera]
            gi|297741533|emb|CBI32665.3| unnamed protein product
            [Vitis vinifera]
          Length = 270

 Score =  209 bits (531), Expect = 1e-51
 Identities = 132/256 (51%), Positives = 155/256 (60%), Gaps = 55/256 (21%)
 Frame = -2

Query: 1110 MKGVDLFCASQASTAICMSMD----QRSIVQQSGRAIDRHNPHLREV---XXXXXXXXXX 952
            MKG+D+FCASQASTAIC+SM+      S + Q GRAIDRHNP +R+              
Sbjct: 1    MKGIDIFCASQASTAICVSMEPGSSSSSAIDQGGRAIDRHNPIIRDARRSSVKTLTTPCS 60

Query: 951  XQPPTETLPY---HQKSRKST--------------------------------SSKPSDL 877
             Q P    PY   HQK+RK+T                                S+K  DL
Sbjct: 61   SQSPINPKPYHQLHQKNRKTTGKSNDQIKKASAKNVDQYGKSSAKPLDMLRKSSAKFVDL 120

Query: 876  FTPPGSSRYLLSNTPRPFFDV---FDPLSALVPIEKTK----------PASVISSTESAA 736
             +PPGSSRYLLS    PFFDV   FDP+ ALVP+E  K          P    SS+  ++
Sbjct: 121  ISPPGSSRYLLSEP--PFFDVLPDFDPVLALVPVEPKKAKAVNLDDDSPVLKPSSSSGSS 178

Query: 735  AAKLSSSTRRNNQVVVLRVSLHCKGCEGKVRKHISRMEGVTSFSIDFATKKVTVVGDVTP 556
             +K SSS+   +QVVVLRVSLHCKGCEGK+RKHISRMEGVTSF+IDFA KKVTVVGDVTP
Sbjct: 179  DSKPSSSSGSADQVVVLRVSLHCKGCEGKLRKHISRMEGVTSFNIDFAAKKVTVVGDVTP 238

Query: 555  LSVLASVSRVKNAQLW 508
            L VLASVS+VK+AQLW
Sbjct: 239  LGVLASVSKVKSAQLW 254


>ref|XP_002281496.1| PREDICTED: uncharacterized protein LOC100263778 [Vitis vinifera]
          Length = 259

 Score =  205 bits (521), Expect = 2e-50
 Identities = 127/242 (52%), Positives = 151/242 (62%), Gaps = 41/242 (16%)
 Frame = -2

Query: 1110 MKGVDLFCASQASTAICMSMDQRSIVQQSGRAIDRHNPHL---REVXXXXXXXXXXXQPP 940
            MKGVDLFCAS ASTAIC SMDQRS+V++  R I+ HNP+L   R              P 
Sbjct: 1    MKGVDLFCASPASTAICSSMDQRSMVRRGTRPINHHNPYLSDRRRSRPLAPVPCSSRLPI 60

Query: 939  TETLPYHQKSRKST----------SSKPSDLFTPPGSSRYLLSNTPRPFFDVF---DPLS 799
            + TL +H KSRKS+          S+  +DL +PPGSSRYLLS+TP  FF++    D +S
Sbjct: 61   SPTL-HHHKSRKSSAKQTDLRRKSSADKNDLTSPPGSSRYLLSDTP--FFNLLPDSDRVS 117

Query: 798  ALVPIEKTKPASVISSTE-------------------------SAAAAKLSSSTRRNNQV 694
            ALVP +  +P     +T                           + A   SSS R ++QV
Sbjct: 118  ALVPTQTARPLVPTQTTRPLVPTQTTRPLVPTKTARPRRLNSNDSPALVSSSSARSHDQV 177

Query: 693  VVLRVSLHCKGCEGKVRKHISRMEGVTSFSIDFATKKVTVVGDVTPLSVLASVSRVKNAQ 514
            VVL VSLHCKGCEGK+RKHIS+MEGVTSFSID ATKKVTV+GDVTPL VLASVSRVKNAQ
Sbjct: 178  VVLWVSLHCKGCEGKLRKHISKMEGVTSFSIDLATKKVTVIGDVTPLGVLASVSRVKNAQ 237

Query: 513  LW 508
            LW
Sbjct: 238  LW 239


>ref|XP_003521353.1| PREDICTED: uncharacterized protein LOC100810015 [Glycine max]
          Length = 290

 Score =  192 bits (488), Expect = 1e-46
 Identities = 128/273 (46%), Positives = 151/273 (55%), Gaps = 72/273 (26%)
 Frame = -2

Query: 1110 MKGVDLFCASQASTAICMSMDQRS---------IVQQSGRAIDRHNPHL----REVXXXX 970
            MKG+D+FCASQASTAIC+ MDQ S           Q  GRAIDRHNP +    R      
Sbjct: 1    MKGIDIFCASQASTAICLGMDQPSSSSSISISNTAQFGGRAIDRHNPIITDPRRTPSRDL 60

Query: 969  XXXXXXXQPPTETLPYH---QKSRKSTSSKPS---------------------------- 883
                     P +  P H   QK++K+++SKPS                            
Sbjct: 61   ISPCSSSLSPIDPKPLHDHLQKAKKNSTSKPSGQKKKNASKGHDQKKKSAAGKLTEHITN 120

Query: 882  --------------------DLFTPPGSSRYLLSNTPRPFFD----VFDPLSALVPIEKT 775
                                DL TPPGSSRYLL +TP   FD    V+DP+ AL  +EK 
Sbjct: 121  NYSSKPIDSILRRSWARPPSDLITPPGSSRYLLGDTPS--FDCVSSVYDPVLALTNVEKE 178

Query: 774  KPASVISSTESAAAAKLSSSTR----RNNQVVVLRVSLHCKGCEGKVRKHISRMEGVTSF 607
            K A VI   E+  ++K SSST      ++QVV LRVSLHCKGCEGKVRKH+SRM GV SF
Sbjct: 179  K-AQVIHHDETNHSSKPSSSTLPKTDSSDQVVELRVSLHCKGCEGKVRKHLSRMRGVRSF 237

Query: 606  SIDFATKKVTVVGDVTPLSVLASVSRVKNAQLW 508
            +IDFA KKVTVVGDVTPLSVLAS+S+VKNAQ W
Sbjct: 238  NIDFAAKKVTVVGDVTPLSVLASISKVKNAQFW 270


>ref|XP_003554336.1| PREDICTED: uncharacterized protein LOC100786319 [Glycine max]
          Length = 290

 Score =  192 bits (487), Expect = 2e-46
 Identities = 128/274 (46%), Positives = 151/274 (55%), Gaps = 73/274 (26%)
 Frame = -2

Query: 1110 MKGVDLFCASQASTAICMSMDQRS------------IVQQSGRAIDRHNPHL----REVX 979
            MKG+D+FCASQASTAIC+SMDQ S              Q  GRAIDRHNP +    R   
Sbjct: 1    MKGIDIFCASQASTAICLSMDQPSSSYSSSSSSISNTAQFGGRAIDRHNPIITDPRRTPS 60

Query: 978  XXXXXXXXXXQPPTETLPYH---QKSRKSTSSKPS------------------------- 883
                      Q P E  P H   QK++K+++SKPS                         
Sbjct: 61   RDLISPSSSSQSPIEPKPLHDHLQKTKKNSTSKPSGQKKKSAAKGHDQKKKSAAGKLTEH 120

Query: 882  -----------------------DLFTPPGSSRYLLSNTPR--PFFDVFDPLSALVPIEK 778
                                   DL TPPGSSRYLL +TP       V+DP+ AL  + K
Sbjct: 121  ITNNYSSKPIDSILRRSWARPPSDLITPPGSSRYLLIDTPSLDRVSSVYDPVLALTDVNK 180

Query: 777  TKPASVISSTESAAAAKLSSSTR----RNNQVVVLRVSLHCKGCEGKVRKHISRMEGVTS 610
             K A VI   ++  ++K SSST      ++QVV LRVSLHCKGCEGKVRKH+SRM GVTS
Sbjct: 181  EK-AQVIHLDQTKHSSKPSSSTLPKSDSSDQVVELRVSLHCKGCEGKVRKHLSRMRGVTS 239

Query: 609  FSIDFATKKVTVVGDVTPLSVLASVSRVKNAQLW 508
            F+IDFA KKVTVVGDVTPLSVLAS+S+VKNAQ W
Sbjct: 240  FNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFW 273


>ref|XP_003542473.1| PREDICTED: uncharacterized protein LOC100813295 [Glycine max]
          Length = 276

 Score =  191 bits (486), Expect = 2e-46
 Identities = 120/257 (46%), Positives = 149/257 (57%), Gaps = 56/257 (21%)
 Frame = -2

Query: 1110 MKGVDLFCASQASTAICMSMDQRSIVQQS-----GRAIDRHNPHL----REVXXXXXXXX 958
            MK +D+FCASQASTAIC+SMDQ S    +     GR IDRHNP +    R          
Sbjct: 1    MKRIDIFCASQASTAICLSMDQASCSSSNTILLGGRTIDRHNPIINDSRRSTSKSLTAPC 60

Query: 957  XXXQPPTETLPYHQ--KSRKSTSSK----------------------------------- 889
               Q P    PYH+  K++K++SSK                                   
Sbjct: 61   SSSQSPINPKPYHELHKAKKNSSSKNATKGHDNQKKRSTAEKLTEHVTNTSKPIDDIVPR 120

Query: 888  -----PSDLFTPPGSSRYLLSNTPR-PFFDVFDPLSALVPIEKTKPASVISSTESAAAAK 727
                 P+DL TPPGS+R LLS+T        +DP+ AL  +   K +  +   E+   +K
Sbjct: 121  SWLKPPADLITPPGSTRSLLSDTALLDGSSDYDPVLALTTMINNKTSQAVHQDEANPVSK 180

Query: 726  LSSSTR----RNNQVVVLRVSLHCKGCEGKVRKHISRMEGVTSFSIDFATKKVTVVGDVT 559
            LSSS+      ++QVVVLRVSLHCKGCEGKVRKH+SRM+GVTSF+IDFA+KKVTVVGDVT
Sbjct: 181  LSSSSHPKSGSSDQVVVLRVSLHCKGCEGKVRKHLSRMQGVTSFNIDFASKKVTVVGDVT 240

Query: 558  PLSVLASVSRVKNAQLW 508
            PLSVLAS+S+VKNAQLW
Sbjct: 241  PLSVLASISKVKNAQLW 257


Top