BLASTX nr result

ID: Coptis24_contig00016225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016225
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82650.1| hypothetical protein VITISV_024771 [Vitis vinifera]    99   2e-18
emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]    96   2e-17
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    92   2e-16
gb|AFW90627.1| hypothetical protein [Solanum tuberosum]                86   9e-15
ref|XP_002510612.1| conserved hypothetical protein [Ricinus comm...    86   2e-14

>emb|CAN82650.1| hypothetical protein VITISV_024771 [Vitis vinifera]
          Length = 320

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 7/263 (2%)
 Frame = -3

Query: 828 MMTADWSQLPQPLLELIYRRL-FPSDHLGFSSVCSSWRLVAIEEGRYL---PHQFVGLIA 661
           M   DWS+LP+ L+ELI+  L    D + F +VC  W LVA+E  + +         ++ 
Sbjct: 1   MSYTDWSKLPKELIELIFDELQHAGDIIRFGTVCRFWGLVALEARQQVFKPLRPLSPMLL 60

Query: 660 SGVTMDSETRRLFEPLQCDYKNSNRAPLNLSVPHRYYCCGASFGWLVLVDESLDMQL--L 487
                D E  +L+     D+       + +      +CC +  GWL+ ++ +   ++  L
Sbjct: 61  LPPNKDDEAHKLY-----DFFKKKAYKIQIPAMRDKWCCNSWNGWLITINHTFPYEICCL 115

Query: 486 DPISGEKIQXXXXXXXXXXXXSFRNFG-KYSVSKAILSCAPSRSTSYRTIVLTICGGLRL 310
           +PISG +I                    ++ ++K +LS  PS S +   I+       +L
Sbjct: 116 NPISGVQIDLPPAITFEDSPPDLDETPIEFFLNKVVLSSTPSPSNANCVIMAIHSNYKKL 175

Query: 309 AYCKPGDEAWTSIEFEVPREHVDAIYYKGKFFAVYNPGGIVTIDFADPDHPTMTDYAPTP 130
           A+CKPGD+ W +++ E   ++ D +YYK  F+A+     +V  D    D P +  +A  P
Sbjct: 176 AFCKPGDKRWITLKSE-DIQYKDLLYYKDNFYAI-GRSKVVQCDIG--DDPRVIPFALLP 231

Query: 129 PGEFFWQSRYLVESKGELFQLRR 61
              +F Q RYLVES G L  + R
Sbjct: 232 KMGYF-QYRYLVESSGCLLYVLR 253


>emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]
          Length = 394

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 73/263 (27%), Positives = 122/263 (46%), Gaps = 7/263 (2%)
 Frame = -3

Query: 828 MMTADWSQLPQPLLELIYRRL-FPSDHLGFSSVCSSWRLVAIEEGRYL---PHQFVGLIA 661
           M   DWS+LP+ L+ELI+  L    D + F +VC  W LVA+E  + +         ++ 
Sbjct: 1   MSYTDWSKLPKELIELIFDELQHAGDIIRFGTVCRFWGLVALEARQQVFKPLRPLSPMLL 60

Query: 660 SGVTMDSETRRLFEPLQCDYKNSNRAPLNLSVPHRYYCCGASFGWLVLVDESLDMQL--L 487
                D    +L+     D+       + +      +CC +  GWL+ ++ +   ++  L
Sbjct: 61  LPPNKDDGAHKLY-----DFFKKKAYKIQIPAMRDKWCCNSWNGWLITINHTFPYEICCL 115

Query: 486 DPISGEKIQXXXXXXXXXXXXSFRNFG-KYSVSKAILSCAPSRSTSYRTIVLTICGGLRL 310
           +PISG +I                    ++ ++K +LS  PS S +   I+       +L
Sbjct: 116 NPISGVQIDLPPAITFEDSPPDLDETPIEFFLNKVVLSSTPSPSNANCVIMAIHSNYNKL 175

Query: 309 AYCKPGDEAWTSIEFEVPREHVDAIYYKGKFFAVYNPGGIVTIDFADPDHPTMTDYAPTP 130
           A+CKPGD+ W +++ E   ++ D +YYK  F+A+     +V  D    D P +  +A  P
Sbjct: 176 AFCKPGDKRWITLKSE-DIQYKDLLYYKDNFYAI-GRSKVVQCDIG--DDPRVIPFALLP 231

Query: 129 PGEFFWQSRYLVESKGELFQLRR 61
              +F Q RYLVES G L  + R
Sbjct: 232 KMGYF-QYRYLVESSGCLLYVLR 253


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 77/272 (28%), Positives = 123/272 (45%), Gaps = 12/272 (4%)
 Frame = -3

Query: 840  KVKTMMTADWSQLPQPLLELIYRRLFP-SDHLGFSSVCSSWRLVAIEEGRYLPHQFVGLI 664
            K+   + ADWS++P   L+LI  +L    D++ F  VC SW  +  ++    P      +
Sbjct: 913  KINQTVMADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSKSPWL 972

Query: 663  ASGVTMDSETRRLFEPLQCDYKNSNRAPLNLSVPHRYYCCGASFGWLVLVDESLDMQLLD 484
                  +SE R  + PL     +     + L      +C G+ +GWLV +   LDM LL+
Sbjct: 973  MLAEKENSEIRGFYSPL-----SGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLN 1027

Query: 483  PISGEKIQXXXXXXXXXXXXSFRNFGKYS------VSKAILSCAPSRSTSYRTIVLTICG 322
            P++  +I                +  + S      + KA+LS APS       I+ +  G
Sbjct: 1028 PLTRVQILLPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAPSSPDCAVMIIYSDYG 1087

Query: 321  GLRLAYCKPGDEAWTSIEFEV-PREHVDAIYYKGKFFAVYNPGGIVTIDFADPDHPTMTD 145
              RLA+ KPG + WT +E E  P +  D IY+ G F AV     +   D +     T+  
Sbjct: 1088 --RLAFTKPGHQTWTLLESESGPVD--DIIYFNGSFLAVNLSWEVWICDISGSQLKTIR- 1142

Query: 144  YAPTPP----GEFFWQSRYLVESKGELFQLRR 61
            +A  P      E  ++++YLVES GE++ + R
Sbjct: 1143 FAAAPALQDVDEIEYEAKYLVESGGEIYMVTR 1174


>gb|AFW90627.1| hypothetical protein [Solanum tuberosum]
          Length = 248

 Score = 86.3 bits (212), Expect = 9e-15
 Identities = 74/251 (29%), Positives = 110/251 (43%), Gaps = 7/251 (2%)
 Frame = -3

Query: 819 ADWSQLPQPLLELIYRRL-FPSDHLGFSSVCSSWRLVAIEEGRYLPHQFVGLIASGVTMD 643
           ADWS+L   LL  I R L    D+L F  VC SW  VA +            +      D
Sbjct: 2   ADWSELQLDLLVSIGRCLNLIEDYLNFGRVCKSWHSVATKANFNNDLCRAPWLMLAEEED 61

Query: 642 SETRRLFEPLQCDYKNSNRAPLNLSVPH-RYYCCGASFGWLVLVDESLDMQLLDPISGEK 466
           +E R+ F          N   LN  +P      C  S GWL+ V E  ++ LL P S  +
Sbjct: 62  NEVRKFFSLY-------NGMILNKRIPKASRKRCLESMGWLITVGEEGEISLLHPFSDVQ 114

Query: 465 IQXXXXXXXXXXXXSFRNFGKYSVSKAILSCAPSRSTSYRTIVLTICGGLR-LAYCKPGD 289
           I+                     + KA+LS +PS ++ Y  +++ I GG R L++ +PGD
Sbjct: 115 IELPHQNTTVEYNKHQTGALTCFIGKAVLSASPSHTSDY--LLMVIDGGSRFLSFWRPGD 172

Query: 288 EAWTSIEFEVPR--EHVDAIYYKGKFFAVYNPGGIVTIDFADPDHPTMT--DYAPTPPGE 121
             WT + +E        D IY+ G+ +AV   G ++  + AD   P +T     P+ P E
Sbjct: 173 IRWTRVTWEGINYSSFADLIYFNGQIYAVDYSGNLLVCNVADVVSPKLTKCHIIPSQPHE 232

Query: 120 FFWQSRYLVES 88
              +  Y++ES
Sbjct: 233 HIPEHLYILES 243


>ref|XP_002510612.1| conserved hypothetical protein [Ricinus communis]
           gi|223551313|gb|EEF52799.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 402

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 76/250 (30%), Positives = 116/250 (46%), Gaps = 30/250 (12%)
 Frame = -3

Query: 825 MTADWSQLPQPLLELIY-RRLFPSDHLGFSSVCSSWR-LVAIEEGRYLPHQFVGLIASGV 652
           M++ W++LP  LL++I  +     D+L   +VC SW+  +A     +L  Q   L+    
Sbjct: 1   MSSTWAELPPELLQVIADKHTNYVDYLVTRAVCGSWQSAIAKRPHNHLLCQLPFLLLP-Y 59

Query: 651 TMDSETRRLFEPLQCDYKNSNRAPLNLSVPHRYY--CCGASFGWLVLVDESLDMQLLDPI 478
             ++  RR F      Y  S+     L +P  Y   CCG+S GWL++V++S  + LL+P+
Sbjct: 60  YQNNPDRRGF------YNISDDKIYVLELPEAYEKRCCGSSHGWLIMVEDSPSIFLLNPL 113

Query: 477 SGEKIQXXXXXXXXXXXXSF-----RNFGKYSVS------------KAILSCAPSRSTSY 349
           + E+I+                   RN  +  +             KAILS  PS  T++
Sbjct: 114 TRERIELPALSTFSIFPTDVVFENSRNLNENFIMREKFHIRDTFIVKAILSSDPSLDTNF 173

Query: 348 RTIVLTICGGLRLAYCKPGDEAWTSIEFEV--PREHVDAIYYKGKFFAVYNPGGI----- 190
             +V+       LA+C+ GD AWT I+     PR + DA++  GK FAV   GGI     
Sbjct: 174 MAVVIYGVNE-NLAFCRSGDAAWTVIDETTSPPRRYKDALFRAGKLFAVDQTGGISILTE 232

Query: 189 --VTIDFADP 166
               I FADP
Sbjct: 233 ENTMIRFADP 242


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