BLASTX nr result

ID: Coptis24_contig00016217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016217
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533349.1| poly(ADP-ribose) glycohydrolase, putative [R...   160   2e-37
ref|XP_004138946.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1...   149   3e-34
ref|XP_002331605.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
ref|XP_002881202.1| hypothetical protein ARALYDRAFT_482111 [Arab...   146   4e-33
ref|XP_002309711.1| predicted protein [Populus trichocarpa] gi|2...   146   4e-33

>ref|XP_002533349.1| poly(ADP-ribose) glycohydrolase, putative [Ricinus communis]
           gi|223526814|gb|EEF29034.1| poly(ADP-ribose)
           glycohydrolase, putative [Ricinus communis]
          Length = 553

 Score =  160 bits (405), Expect = 2e-37
 Identities = 82/152 (53%), Positives = 105/152 (69%)
 Frame = +1

Query: 178 MENRKDLKSILPFLPLVLRSSSLFWPSQVVKALKSLTKGPTHCNVDSGEIFFLAVEDIRN 357
           ME+R+DLKS++PFLPLV+RSS+L WPSQVV+ LK L++GP   NV+SGE+ F A+ D+RN
Sbjct: 1   MESREDLKSVIPFLPLVIRSSALSWPSQVVETLKELSRGPDFSNVNSGELLFYAISDLRN 60

Query: 358 SLGLSSHSLASNAGQGYSLFFDELMTSVESNKWFDEVVPGXXXXXXXXXXXXEGHYAKVD 537
           SL LS+HSLA +A QGY+LFFDEL++  ES KWF EV+P             E HY   D
Sbjct: 61  SLSLSTHSLAPSAQQGYALFFDELISRAESKKWFQEVLPALANLALRLPSLLELHYQTAD 120

Query: 538 EIGKGGVEGFCGVELGLRQLDSQQAGIVFLSQ 633
            +         GV+ GLR L  Q+AGIV+LSQ
Sbjct: 121 SL-------LDGVKTGLRLLGPQEAGIVYLSQ 145


>ref|XP_004138946.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1-like [Cucumis sativus]
           gi|449505627|ref|XP_004162526.1| PREDICTED:
           poly(ADP-ribose) glycohydrolase 1-like [Cucumis sativus]
          Length = 550

 Score =  149 bits (377), Expect = 3e-34
 Identities = 78/155 (50%), Positives = 103/155 (66%)
 Frame = +1

Query: 169 EKQMENRKDLKSILPFLPLVLRSSSLFWPSQVVKALKSLTKGPTHCNVDSGEIFFLAVED 348
           E  + +R+DL SILPFLPL+LRSS+LFWPSQVV+ LKS+  GP H  V+SGE  F ++ +
Sbjct: 4   EMVIGSREDLNSILPFLPLLLRSSTLFWPSQVVETLKSMAAGPDHSGVNSGEALFRSISN 63

Query: 349 IRNSLGLSSHSLASNAGQGYSLFFDELMTSVESNKWFDEVVPGXXXXXXXXXXXXEGHYA 528
           IRNSL LS+H LAS++ +GY+LFFD+LM+  ES +WF EV+P             E HY 
Sbjct: 64  IRNSLSLSNHRLASSSQRGYALFFDKLMSETESMQWFREVIPALGNLLLQFPSLLETHYR 123

Query: 529 KVDEIGKGGVEGFCGVELGLRQLDSQQAGIVFLSQ 633
             D++     +G    + GLR L SQ AG V+LSQ
Sbjct: 124 NTDQLAS---KGSGKAKTGLRLLASQVAGTVYLSQ 155


>ref|XP_002331605.1| predicted protein [Populus trichocarpa] gi|222874001|gb|EEF11132.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  149 bits (377), Expect = 3e-34
 Identities = 82/153 (53%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
 Frame = +1

Query: 178 MENRKDLKSILPFLPLVLRSSSLFWPSQVVKALKSLTKGPTHCNVDSGEIFFLAVEDIRN 357
           MENR+DLKS+LPFLPL+L SS+LFWPSQVVK+L++L+KGP +  VDSGE+ F A+  IR+
Sbjct: 1   MENREDLKSMLPFLPLLLGSSNLFWPSQVVKSLETLSKGPLYSKVDSGELLFDAISHIRD 60

Query: 358 SLGLSS-HSLASNAGQGYSLFFDELMTSVESNKWFDEVVPGXXXXXXXXXXXXEGHYAKV 534
           SL L S   +A  A  GY+LFFDEL++  E++KWF+EVVP             E HY   
Sbjct: 61  SLALPSLQPVAPFAHGGYALFFDELISRAEASKWFEEVVPALANLLLRLPSLLESHYQDA 120

Query: 535 DEIGKGGVEGFCGVELGLRQLDSQQAGIVFLSQ 633
           D +       F GV  GLR L SQ+AGIVFL Q
Sbjct: 121 DYL-------FNGVRTGLRLLGSQEAGIVFLGQ 146


>ref|XP_002881202.1| hypothetical protein ARALYDRAFT_482111 [Arabidopsis lyrata subsp.
           lyrata] gi|297327041|gb|EFH57461.1| hypothetical protein
           ARALYDRAFT_482111 [Arabidopsis lyrata subsp. lyrata]
          Length = 557

 Score =  146 bits (368), Expect = 4e-33
 Identities = 75/152 (49%), Positives = 100/152 (65%)
 Frame = +1

Query: 178 MENRKDLKSILPFLPLVLRSSSLFWPSQVVKALKSLTKGPTHCNVDSGEIFFLAVEDIRN 357
           MENR+DL SIL +LPLV+RSSSL+WP +VV+ALK++++GP+H  VDSGE+ + A+ D+R 
Sbjct: 1   MENREDLNSILSYLPLVIRSSSLYWPPRVVEALKAMSEGPSHSRVDSGEVLWQAISDMRR 60

Query: 358 SLGLSSHSLASNAGQGYSLFFDELMTSVESNKWFDEVVPGXXXXXXXXXXXXEGHYAKVD 537
           SL  S  +L  +A  GY+L FDEL+   ES +WFDE++P             E H+   D
Sbjct: 61  SLSFS--TLEPSASHGYALLFDELIDEKESKRWFDEIIPALARLLLQFPSLLEVHFQNAD 118

Query: 538 EIGKGGVEGFCGVELGLRQLDSQQAGIVFLSQ 633
                      G++ GLR LDSQQAGIVFLSQ
Sbjct: 119 NF-------VSGIKTGLRLLDSQQAGIVFLSQ 143


>ref|XP_002309711.1| predicted protein [Populus trichocarpa] gi|222852614|gb|EEE90161.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  146 bits (368), Expect = 4e-33
 Identities = 78/153 (50%), Positives = 102/153 (66%), Gaps = 1/153 (0%)
 Frame = +1

Query: 178 MENRKDLKSILPFLPLVLRSSSLFWPSQVVKALKSLTKGPTHCNVDSGEIFFLAVEDIRN 357
           MENR+DLKS+LPFLPL+LRSS+LFWPSQVV+ LK+L+KGP +  VD+GE+ F A+ +IR+
Sbjct: 1   MENREDLKSMLPFLPLLLRSSNLFWPSQVVELLKTLSKGPFYSKVDTGELLFNAISNIRD 60

Query: 358 SLGLSS-HSLASNAGQGYSLFFDELMTSVESNKWFDEVVPGXXXXXXXXXXXXEGHYAKV 534
           SL L S H L+  A +GY+LFFDEL++  E+ KWF +VVP             E HY   
Sbjct: 61  SLALPSLHRLSPFAHEGYALFFDELISREEAAKWFADVVPTLAKLLLRLPSLLESHYQNA 120

Query: 535 DEIGKGGVEGFCGVELGLRQLDSQQAGIVFLSQ 633
           D +         GV+ G R L  Q+AG+VFL Q
Sbjct: 121 DNLRN-------GVKTGFRLLGPQEAGVVFLGQ 146


Top