BLASTX nr result

ID: Coptis24_contig00016213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016213
         (922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81672.1| hypothetical protein VITISV_000588 [Vitis vinifera]    74   6e-11
gb|AAM62582.1| unknown [Arabidopsis thaliana]                          67   8e-09
ref|NP_564042.1| Aminotransferase-like, plant mobile domain fami...    67   8e-09
ref|XP_002520402.1| conserved hypothetical protein [Ricinus comm...    61   3e-07
gb|ABD32892.1| IMP dehydrogenase/GMP reductase, related [Medicag...    58   4e-06

>emb|CAN81672.1| hypothetical protein VITISV_000588 [Vitis vinifera]
          Length = 689

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 72/285 (25%), Positives = 111/285 (38%), Gaps = 13/285 (4%)
 Frame = -2

Query: 879 SGSSNPLENESELVSKNDFNFSRRLSIVDHPTLAPDPDMHVSC-----------LYNTDR 733
           S   N  E E E       N    L     PTL  DP  H+S            L     
Sbjct: 5   SSDQNGCEEEEEEEEAKPQN----LVACQSPTLLKDPHKHISRHGLRGEILPKGLKTCGS 60

Query: 732 KMSSTRWRCAMPSIKDF*SHLVERGEEMEHVRA*ILGTPFGPLIS--CTSIRIDRPLIFA 559
            ++ T+W   +  +                V+  +    FG  IS  C S R ++  + +
Sbjct: 61  SIALTQWYDKLDPV----------------VKQKVDNAGFGRFISSLCPSSRAEKVRVIS 104

Query: 558 LAERCWHTTHTFHLPCGEIGITPLDFTMLTSLSVGEKKLVLFDSSIEDDFEMLKTLLLSL 379
           LAER W TT T H P GE+G+TP DF+++T L +G K +         + ++LK L    
Sbjct: 105 LAERWWDTTGTLHFPFGEVGMTPYDFSVITGLRIGGKPIPYNAGVHRSEDDLLKAL---- 160

Query: 378 FDFEGRLVLGNMDGRYILNLHIREKFMHRLDVDYCLEHEVDALYLDPNSAEEDEFIRIFL 199
                 ++ G++   ++      E F           H V    +     + +   R F+
Sbjct: 161 -GSRPPVIRGSVSCSWLF-----ENF-----------HNV----VCNTDRDRECHTRAFI 199

Query: 198 LYFLGQVGFTTGKSGIWVGWLASLVDLDNLDDFDWGGAFMTYLYT 64
           LY  G   F T    + +  L +L D+D + ++DWGGA    L T
Sbjct: 200 LYLFGCTMFGTLDCKVNLNSLPALEDVDRIGEYDWGGAAYAALCT 244


>gb|AAM62582.1| unknown [Arabidopsis thaliana]
          Length = 478

 Score = 66.6 bits (161), Expect = 8e-09
 Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 1/176 (0%)
 Frame = -2

Query: 591 SIRIDRPLIFALAERCWHTTHTFHLPCGEIGITPLDFTMLTSLSVGEKKLVLFDSSIEDD 412
           SI ++  LI AL ER    T+TFH PCGE+ IT  + +++  L+V  K +V      ED 
Sbjct: 59  SISLNNSLISALVERWRRETNTFHFPCGEMTITLDEVSLILGLAVDGKPVVGVKEKDEDP 118

Query: 411 FEMLKTLLLSLFDFEGRLVLGNMDGRYILNLHIREKFMHRLDVDYCLEHEVDALYLDPNS 232
            ++   LL       G+L  G + G  +    ++E F        C +            
Sbjct: 119 SQVCLKLL-------GKLPKGELSGNRVTAKWLKESFAE------CPK--------GATM 157

Query: 231 AEEDEFIRIFLLYFLGQVGF-TTGKSGIWVGWLASLVDLDNLDDFDWGGAFMTYLY 67
            E +   R +L+Y +G   F TT  S I V +L    D +   ++ WG A + +LY
Sbjct: 158 KEIEYHTRAYLIYIVGSTIFATTDPSKISVDYLILFEDFEKAGEYAWGAAALAFLY 213


>ref|NP_564042.1| Aminotransferase-like, plant mobile domain family protein
           [Arabidopsis thaliana]
           gi|9665070|gb|AAF97272.1|AC034106_15 Contains similarity
           to a hypothetical protein At2g25010 gi|4559351 from
           Arabidopsis thaliana chromosome II gb|AC006585
           [Arabidopsis thaliana] gi|62320302|dbj|BAD94623.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332191532|gb|AEE29653.1| Aminotransferase-like, plant
           mobile domain family protein [Arabidopsis thaliana]
          Length = 478

 Score = 66.6 bits (161), Expect = 8e-09
 Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 1/176 (0%)
 Frame = -2

Query: 591 SIRIDRPLIFALAERCWHTTHTFHLPCGEIGITPLDFTMLTSLSVGEKKLVLFDSSIEDD 412
           SI ++  LI AL ER    T+TFH PCGE+ IT  + +++  L+V  K +V      ED 
Sbjct: 59  SISLNNSLISALVERWRRETNTFHFPCGEMTITLDEVSLILGLAVDGKPVVGVKEKDEDP 118

Query: 411 FEMLKTLLLSLFDFEGRLVLGNMDGRYILNLHIREKFMHRLDVDYCLEHEVDALYLDPNS 232
            ++   LL       G+L  G + G  +    ++E F        C +            
Sbjct: 119 SQVCLRLL-------GKLPKGELSGNRVTAKWLKESFAE------CPK--------GATM 157

Query: 231 AEEDEFIRIFLLYFLGQVGF-TTGKSGIWVGWLASLVDLDNLDDFDWGGAFMTYLY 67
            E +   R +L+Y +G   F TT  S I V +L    D +   ++ WG A + +LY
Sbjct: 158 KEIEYHTRAYLIYIVGSTIFATTDPSKISVDYLILFEDFEKAGEYAWGAAALAFLY 213


>ref|XP_002520402.1| conserved hypothetical protein [Ricinus communis]
           gi|223540449|gb|EEF42018.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 837

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 70/254 (27%), Positives = 106/254 (41%), Gaps = 9/254 (3%)
 Frame = -2

Query: 801 IVDHPTLAPDPDMHVSCLYNTDRKMSSTRWRCAMPSIKDF*SHLVERGE------EMEHV 640
           ++D     P P +  S LY+ +  +SS  W      +     H  + GE      ++E V
Sbjct: 18  LMDENASNPGP-VDASVLYDQENHVSSAVWDGQERGVLRCHEHTSKLGEWRLTQKQIEQV 76

Query: 639 RA*ILGTPFGPLISCTSIRIDRPLIFALAERCWHTTHTFHLPCGEIGITPLDFTMLTSLS 460
                   FG L    SI +D PLI AL ER    T+TFHL  GE+ IT  D  +L  L+
Sbjct: 77  EM----AGFGYLRRIPSISLDNPLISALIERWRKETNTFHLRVGEMTITLEDVALLLGLA 132

Query: 459 V-GEKKLVLFDSSIEDDFEMLKTLLLSLFDFEGRLV-LGNMDGRYILNLHIREKFMHRLD 286
           + GE  L +  +S +   E           F G++   G M G  +    ++E F     
Sbjct: 133 IDGEPVLGVTYTSCKPICE----------KFLGKVPDAGYMSGGMVKLSWLKEYF----- 177

Query: 285 VDYCLEHEVDALYLDPNSAEEDEFIRIFLLYFLGQVGF-TTGKSGIWVGWLASLVDLDNL 109
              C E        D    E +   R +LLY +G   F TT  + + + +L    D +  
Sbjct: 178 -SQCPE--------DAPLEEIERHTRAYLLYLVGSTIFSTTTGNKVPIMYLPLFEDFEKA 228

Query: 108 DDFDWGGAFMTYLY 67
            ++ WG A + +LY
Sbjct: 229 GNYAWGAAALAFLY 242


>gb|ABD32892.1| IMP dehydrogenase/GMP reductase, related [Medicago truncatula]
           gi|124360943|gb|ABN08915.1| IMP dehydrogenase/GMP
           reductase, related [Medicago truncatula]
          Length = 664

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 56/193 (29%), Positives = 82/193 (42%), Gaps = 7/193 (3%)
 Frame = -2

Query: 624 GTPFGPLISCTSIRIDRPLIFALAERCWHTTHTFHLPCGEIGITPLDFTMLTSLSVGEKK 445
           GT  G L   +   ID  LI    ER +  T +FHLP GE+ IT  D   L  + +    
Sbjct: 228 GTDLGWLKDTSYNMIDHGLICVFVERWYEETSSFHLPFGEMTITLDDVASLLHIPINGML 287

Query: 444 LVLFDSSIEDDFEMLKTLLLSLFDFEGRLVLGNMDGRYILNLHIREKFMHRLD------V 283
           L     S  +  E+++T L S   F+ R  L      +    ++ E F  RL        
Sbjct: 288 LSHGSISRGETVELMETYLGS-STFDARRELKKNKRVHCRFGYLEEIFKERLKEQRDLAA 346

Query: 282 DYCLEHEVDALYLDPNSAEEDEFIRIFLLYFLGQVGFTTGKSGIW-VGWLASLVDLDNLD 106
           +Y +  EV+ L         D+ +RI+LLY +    FT     +  V +L    DLD + 
Sbjct: 347 EYGVTEEVERL--------RDQIVRIYLLYLVSITIFTDKSQWVVDVVYLKYFRDLDFVS 398

Query: 105 DFDWGGAFMTYLY 67
            F W  A + +LY
Sbjct: 399 GFSWRVAALAHLY 411


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