BLASTX nr result
ID: Coptis24_contig00016211
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00016211 (280 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002520437.1| FUS-interacting serine-arginine-rich protein... 47 6e-08 gb|AFK47423.1| unknown [Medicago truncatula] 47 6e-08 ref|XP_003551321.1| PREDICTED: uncharacterized protein LOC100808... 47 7e-08 ref|XP_003530834.1| PREDICTED: uncharacterized protein LOC100805... 47 7e-08 gb|AFK40884.1| unknown [Lotus japonicus] 47 7e-08 >ref|XP_002520437.1| FUS-interacting serine-arginine-rich protein 1, putative [Ricinus communis] gi|223540279|gb|EEF41850.1| FUS-interacting serine-arginine-rich protein 1, putative [Ricinus communis] Length = 399 Score = 46.6 bits (109), Expect(2) = 6e-08 Identities = 21/24 (87%), Positives = 23/24 (95%), Gaps = 1/24 (4%) Frame = +3 Query: 114 KVVDVHLV-DPWTRETRGFGFVTM 182 KV+DVHLV DPWTRE+RGFGFVTM Sbjct: 72 KVIDVHLVVDPWTRESRGFGFVTM 95 Score = 35.0 bits (79), Expect(2) = 6e-08 Identities = 14/19 (73%), Positives = 18/19 (94%) Frame = +1 Query: 181 CLKYLGQSILEGRVITLEK 237 C+KYL +S+LEGRVIT+EK Sbjct: 104 CIKYLNRSVLEGRVITVEK 122 >gb|AFK47423.1| unknown [Medicago truncatula] Length = 340 Score = 47.0 bits (110), Expect(2) = 6e-08 Identities = 22/24 (91%), Positives = 23/24 (95%), Gaps = 1/24 (4%) Frame = +3 Query: 114 KVVDVHLV-DPWTRETRGFGFVTM 182 KVVDVHLV DPWTRE+RGFGFVTM Sbjct: 70 KVVDVHLVVDPWTRESRGFGFVTM 93 Score = 34.7 bits (78), Expect(2) = 6e-08 Identities = 14/19 (73%), Positives = 18/19 (94%) Frame = +1 Query: 181 CLKYLGQSILEGRVITLEK 237 C+KYL +S+LEGRVIT+EK Sbjct: 102 CVKYLNRSVLEGRVITVEK 120 >ref|XP_003551321.1| PREDICTED: uncharacterized protein LOC100808038 [Glycine max] Length = 364 Score = 46.6 bits (109), Expect(2) = 7e-08 Identities = 21/24 (87%), Positives = 23/24 (95%), Gaps = 1/24 (4%) Frame = +3 Query: 114 KVVDVHLV-DPWTRETRGFGFVTM 182 KV+DVHLV DPWTRE+RGFGFVTM Sbjct: 75 KVIDVHLVVDPWTRESRGFGFVTM 98 Score = 34.7 bits (78), Expect(2) = 7e-08 Identities = 14/19 (73%), Positives = 18/19 (94%) Frame = +1 Query: 181 CLKYLGQSILEGRVITLEK 237 C+KYL +S+LEGRVIT+EK Sbjct: 107 CVKYLNRSVLEGRVITVEK 125 >ref|XP_003530834.1| PREDICTED: uncharacterized protein LOC100805126 [Glycine max] Length = 362 Score = 46.6 bits (109), Expect(2) = 7e-08 Identities = 21/24 (87%), Positives = 23/24 (95%), Gaps = 1/24 (4%) Frame = +3 Query: 114 KVVDVHLV-DPWTRETRGFGFVTM 182 KV+DVHLV DPWTRE+RGFGFVTM Sbjct: 73 KVIDVHLVVDPWTRESRGFGFVTM 96 Score = 34.7 bits (78), Expect(2) = 7e-08 Identities = 14/19 (73%), Positives = 18/19 (94%) Frame = +1 Query: 181 CLKYLGQSILEGRVITLEK 237 C+KYL +S+LEGRVIT+EK Sbjct: 105 CVKYLNRSVLEGRVITVEK 123 >gb|AFK40884.1| unknown [Lotus japonicus] Length = 344 Score = 46.6 bits (109), Expect(2) = 7e-08 Identities = 21/24 (87%), Positives = 23/24 (95%), Gaps = 1/24 (4%) Frame = +3 Query: 114 KVVDVHLV-DPWTRETRGFGFVTM 182 KV+DVHLV DPWTRE+RGFGFVTM Sbjct: 73 KVIDVHLVVDPWTRESRGFGFVTM 96 Score = 34.7 bits (78), Expect(2) = 7e-08 Identities = 14/19 (73%), Positives = 18/19 (94%) Frame = +1 Query: 181 CLKYLGQSILEGRVITLEK 237 C+KYL +S+LEGRVIT+EK Sbjct: 105 CVKYLNRSVLEGRVITVEK 123