BLASTX nr result

ID: Coptis24_contig00016211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016211
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520437.1| FUS-interacting serine-arginine-rich protein...    47   6e-08
gb|AFK47423.1| unknown [Medicago truncatula]                           47   6e-08
ref|XP_003551321.1| PREDICTED: uncharacterized protein LOC100808...    47   7e-08
ref|XP_003530834.1| PREDICTED: uncharacterized protein LOC100805...    47   7e-08
gb|AFK40884.1| unknown [Lotus japonicus]                               47   7e-08

>ref|XP_002520437.1| FUS-interacting serine-arginine-rich protein 1, putative [Ricinus
           communis] gi|223540279|gb|EEF41850.1| FUS-interacting
           serine-arginine-rich protein 1, putative [Ricinus
           communis]
          Length = 399

 Score = 46.6 bits (109), Expect(2) = 6e-08
 Identities = 21/24 (87%), Positives = 23/24 (95%), Gaps = 1/24 (4%)
 Frame = +3

Query: 114 KVVDVHLV-DPWTRETRGFGFVTM 182
           KV+DVHLV DPWTRE+RGFGFVTM
Sbjct: 72  KVIDVHLVVDPWTRESRGFGFVTM 95



 Score = 35.0 bits (79), Expect(2) = 6e-08
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = +1

Query: 181 CLKYLGQSILEGRVITLEK 237
           C+KYL +S+LEGRVIT+EK
Sbjct: 104 CIKYLNRSVLEGRVITVEK 122


>gb|AFK47423.1| unknown [Medicago truncatula]
          Length = 340

 Score = 47.0 bits (110), Expect(2) = 6e-08
 Identities = 22/24 (91%), Positives = 23/24 (95%), Gaps = 1/24 (4%)
 Frame = +3

Query: 114 KVVDVHLV-DPWTRETRGFGFVTM 182
           KVVDVHLV DPWTRE+RGFGFVTM
Sbjct: 70  KVVDVHLVVDPWTRESRGFGFVTM 93



 Score = 34.7 bits (78), Expect(2) = 6e-08
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = +1

Query: 181 CLKYLGQSILEGRVITLEK 237
           C+KYL +S+LEGRVIT+EK
Sbjct: 102 CVKYLNRSVLEGRVITVEK 120


>ref|XP_003551321.1| PREDICTED: uncharacterized protein LOC100808038 [Glycine max]
          Length = 364

 Score = 46.6 bits (109), Expect(2) = 7e-08
 Identities = 21/24 (87%), Positives = 23/24 (95%), Gaps = 1/24 (4%)
 Frame = +3

Query: 114 KVVDVHLV-DPWTRETRGFGFVTM 182
           KV+DVHLV DPWTRE+RGFGFVTM
Sbjct: 75  KVIDVHLVVDPWTRESRGFGFVTM 98



 Score = 34.7 bits (78), Expect(2) = 7e-08
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = +1

Query: 181 CLKYLGQSILEGRVITLEK 237
           C+KYL +S+LEGRVIT+EK
Sbjct: 107 CVKYLNRSVLEGRVITVEK 125


>ref|XP_003530834.1| PREDICTED: uncharacterized protein LOC100805126 [Glycine max]
          Length = 362

 Score = 46.6 bits (109), Expect(2) = 7e-08
 Identities = 21/24 (87%), Positives = 23/24 (95%), Gaps = 1/24 (4%)
 Frame = +3

Query: 114 KVVDVHLV-DPWTRETRGFGFVTM 182
           KV+DVHLV DPWTRE+RGFGFVTM
Sbjct: 73  KVIDVHLVVDPWTRESRGFGFVTM 96



 Score = 34.7 bits (78), Expect(2) = 7e-08
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = +1

Query: 181 CLKYLGQSILEGRVITLEK 237
           C+KYL +S+LEGRVIT+EK
Sbjct: 105 CVKYLNRSVLEGRVITVEK 123


>gb|AFK40884.1| unknown [Lotus japonicus]
          Length = 344

 Score = 46.6 bits (109), Expect(2) = 7e-08
 Identities = 21/24 (87%), Positives = 23/24 (95%), Gaps = 1/24 (4%)
 Frame = +3

Query: 114 KVVDVHLV-DPWTRETRGFGFVTM 182
           KV+DVHLV DPWTRE+RGFGFVTM
Sbjct: 73  KVIDVHLVVDPWTRESRGFGFVTM 96



 Score = 34.7 bits (78), Expect(2) = 7e-08
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = +1

Query: 181 CLKYLGQSILEGRVITLEK 237
           C+KYL +S+LEGRVIT+EK
Sbjct: 105 CVKYLNRSVLEGRVITVEK 123


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