BLASTX nr result

ID: Coptis24_contig00016206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016206
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19378.3| unnamed protein product [Vitis vinifera]              108   4e-22
ref|XP_002320664.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002525295.1| conserved hypothetical protein [Ricinus comm...   107   2e-21
ref|XP_002301143.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_003634344.1| PREDICTED: uncharacterized protein LOC100267...    97   2e-18

>emb|CBI19378.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score =  108 bits (271), Expect = 4e-22
 Identities = 56/125 (44%), Positives = 83/125 (66%)
 Frame = -2

Query: 397 AKHESVFIRCVKAPFRILGRARDFYVRSLTDCSGRMGEASVIVGYPGGSVNIVPRSFSVN 218
           A+ ++ F+R +  P R+L +ARDFYVRSLTD + R+   + + G PG  ++ +P+SFSV+
Sbjct: 5   AQSQNRFMRIITIPIRVLSKARDFYVRSLTDAAERVSRGNAM-GCPGVHISTLPKSFSVS 63

Query: 217 SSRSNDDEDIKELMRAASQRGLREKLEMEIQQLQQLSKKTDALPRSRTVAIGRIDEDKPC 38
           SSRS D ED+  L R+ S      +++M +  LQ     + A PRS +V +GRIDED+PC
Sbjct: 64  SSRSGDGEDVGSLSRSGSASSSSNRVDMNV-FLQPPKMGSRAAPRSCSVGMGRIDEDRPC 122

Query: 37  DFDED 23
           DF+ED
Sbjct: 123 DFEED 127


>ref|XP_002320664.1| predicted protein [Populus trichocarpa] gi|222861437|gb|EEE98979.1|
           predicted protein [Populus trichocarpa]
          Length = 158

 Score =  107 bits (267), Expect = 1e-21
 Identities = 62/147 (42%), Positives = 93/147 (63%), Gaps = 12/147 (8%)
 Frame = -2

Query: 406 NRAAKHESVFIRCVKAPFRILGRARDFYVRSLTDCSGRMGEASVIVGYPGGSVNIVPRSF 227
           N+ ++ ES   + +KAP RIL RARDFY++ + + S ++     ++  P G+ N +PRS+
Sbjct: 4   NKKSRKESTLKKILKAPLRILARARDFYIKGMAEYSDQV----CVMSCPTGNFNTMPRSY 59

Query: 226 SVNSSRSND-DEDIKELMRAASQRG----LREKLEMEIQQLQQLSKKTDA------LPRS 80
           SV+S++ N  D+D +E +RAAS R        K+ +++   QQ S K  A      +PRS
Sbjct: 60  SVSSTKPNHLDDDRREPLRAASTRSNLGSRNSKINVDVPARQQYSHKKSATRLGDNMPRS 119

Query: 79  RTVAIGRIDEDKPCDFD-EDLKTKPDL 2
            TVAIGRIDE+KPCDFD ED+K K ++
Sbjct: 120 HTVAIGRIDEEKPCDFDEEDVKVKTNV 146


>ref|XP_002525295.1| conserved hypothetical protein [Ricinus communis]
           gi|223535453|gb|EEF37123.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 164

 Score =  107 bits (266), Expect = 2e-21
 Identities = 58/143 (40%), Positives = 92/143 (64%), Gaps = 7/143 (4%)
 Frame = -2

Query: 409 SNRAAKHESVFIRCVKAPFRILGRARDFYVRSLTDCSGRMGEASVIVGYPGGSVNIVPRS 230
           + +    +S   + +K+P RIL +ARDFYV+S+T+ S R+G  + +    G  V  +P+S
Sbjct: 3   TKKPVNKQSKISKFIKSPLRILLKARDFYVKSMTEYSDRIGYGTFMGCPTGHVVETLPKS 62

Query: 229 FSVNSSRSND-DEDIKELMRAASQRGLREKLEMEIQQLQQLSKKTD------ALPRSRTV 71
           +SVNS++S+  D+D +EL+RAAS RGL  + ++ + Q QQ  K  +      ++PRS +V
Sbjct: 63  YSVNSTKSSSRDDDYRELLRAASTRGLSSRNDLGVLQRQQSRKSPNNTRANISMPRSHSV 122

Query: 70  AIGRIDEDKPCDFDEDLKTKPDL 2
            IGRIDE+K CD  +D+K K D+
Sbjct: 123 GIGRIDEEKACDNFDDIKVKTDV 145


>ref|XP_002301143.1| predicted protein [Populus trichocarpa] gi|222842869|gb|EEE80416.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 61/133 (45%), Positives = 81/133 (60%), Gaps = 10/133 (7%)
 Frame = -2

Query: 397 AKHESVFIRCVKAPFRILGRARDFYVRSLTDCSGRMGEASVIVGYPGGSVNIVPRSFSVN 218
           A ++S F+R V  P R+L +ARD YV+S+ DCS RMG    +   P G    +P SFS+ 
Sbjct: 5   AHNQSKFMRVVAIPVRLLCKARDVYVKSIIDCSTRMGYGHSMA-LPTGRYPPLPWSFSIG 63

Query: 217 SSRSNDDEDIKELMRAASQR--GLREKLEMEIQQLQQLSKKTDA-----LPRSRTVA--- 68
           SSR ND+ED ++L+RAAS R  G R ++EM IQQL+Q            LP+S       
Sbjct: 64  SSRCNDNEDYRKLVRAASARSLGQRNEIEMFIQQLRQQQSSIMVGSKMFLPKSCGFGMGI 123

Query: 67  IGRIDEDKPCDFD 29
           +GRID DKPCDF+
Sbjct: 124 MGRIDGDKPCDFE 136


>ref|XP_003634344.1| PREDICTED: uncharacterized protein LOC100267722 [Vitis vinifera]
          Length = 149

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 57/134 (42%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
 Frame = -2

Query: 397 AKHESVFIRCVKAPFRILGRARDFYVRSLTDCSGRMGEASVIVGYPGGSVNIVPRSFSVN 218
           A +++ F+R +  P R+LG+A+D YVR +T+C+ R    ++  G P G    +PRS+S  
Sbjct: 5   AHNQNRFMRIITLPIRVLGKAKDLYVRGMTNCATRGYGNNM--GGPAG----MPRSYSYA 58

Query: 217 SSRSNDDEDIKELMRAASQRGLREKLEMEIQQLQQLSKKTDALPRSRTVAIGRIDEDKPC 38
           SSRSND+ED +EL+RAAS   L   +++     Q  ++K+  +PRS +V + RIDED PC
Sbjct: 59  SSRSNDNEDFRELVRAASVNTLGHGVDLNALLQQSAAEKSKVVPRSCSVGMARIDEDGPC 118

Query: 37  -DFDE-DLKTKPDL 2
            DF E + K K DL
Sbjct: 119 NDFGEVNFKAKADL 132


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