BLASTX nr result

ID: Coptis24_contig00016204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016204
         (1427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517178.1| PREDICTED: protein AF-9 homolog [Glycine max]     408   e-111
ref|XP_002275472.1| PREDICTED: protein AF-9 homolog [Vitis vinif...   405   e-110
ref|XP_003537632.1| PREDICTED: protein AF-9 homolog [Glycine max]     395   e-107
ref|XP_002269156.2| PREDICTED: protein AF-9 homolog [Vitis vinif...   395   e-107
gb|ACU19426.1| unknown [Glycine max]                                  393   e-107

>ref|XP_003517178.1| PREDICTED: protein AF-9 homolog [Glycine max]
          Length = 279

 Score =  408 bits (1048), Expect = e-111
 Identities = 203/275 (73%), Positives = 228/275 (82%), Gaps = 1/275 (0%)
 Frame = +1

Query: 166 LTTTMPLTAGRKHGSDLSDG-SVSKLQRTKSTRPNEEYEKKIVNRKMKDVEISVPIVYGT 342
           ++ + PL   R+      DG S  KL R K   P+E+ +KK  NR++KDVEI VPIVYGT
Sbjct: 1   MSNSNPLPLKRQGEQSSDDGASAIKLSRLKIAIPSEDSDKKNANRRLKDVEICVPIVYGT 60

Query: 343 ISFWLGKKASEYHSHKWTVYVRSATNEDLGVVIKRAVFQLHPSFNNPTRVVESPPFELSE 522
           I+F+LG+KASE  SHKWTVYVR A+NEDLGVV+KR VFQLHPSFNNPTRVVESPPFELSE
Sbjct: 61  IAFYLGRKASESQSHKWTVYVRGASNEDLGVVVKRVVFQLHPSFNNPTRVVESPPFELSE 120

Query: 523 SGWGEFEIAISLFFHNDVCDKQLDLYHHLKLYPEEESGPQTTKKPVVVESYDEIVFSEPS 702
            GWGEFEIAI+L+FH DVC+KQLDLYHHLKLYPE+ESGPQ+TKKPVVVESY+EIVF EPS
Sbjct: 121 CGWGEFEIAITLYFHPDVCEKQLDLYHHLKLYPEDESGPQSTKKPVVVESYNEIVFPEPS 180

Query: 703 EGFFARVQNHPAVNVPRLPATFSLLPQGLIDNVNDRRRGDTKDHPLGQWFMNFSEADELL 882
           EGF ARVQNHPAVNVPRLPA  +L     ID VND+ RGDTKDHPL QWFMNFSEADELL
Sbjct: 181 EGFLARVQNHPAVNVPRLPAGLNLPSPVPIDTVNDKERGDTKDHPLTQWFMNFSEADELL 240

Query: 883 KLAAARQQIQTHIVKLRRQLSLLDAQPQQSNPISG 987
           KLAAARQQ+Q HIVKLRRQLSL++  PQ S P SG
Sbjct: 241 KLAAARQQVQAHIVKLRRQLSLVEGLPQLSKPPSG 275


>ref|XP_002275472.1| PREDICTED: protein AF-9 homolog [Vitis vinifera]
          Length = 273

 Score =  405 bits (1040), Expect = e-110
 Identities = 198/267 (74%), Positives = 227/267 (85%), Gaps = 2/267 (0%)
 Frame = +1

Query: 196 RKHGSDLSD--GSVSKLQRTKSTRPNEEYEKKIVNRKMKDVEISVPIVYGTISFWLGKKA 369
           +KHG D  D  G   K QR+K  +  E+ EKK +N+++KDVEISVPIVYG I+FWLGKKA
Sbjct: 7   KKHGPDQPDIVGPTPKSQRSKMVKSTEDGEKKNLNKRLKDVEISVPIVYGNIAFWLGKKA 66

Query: 370 SEYHSHKWTVYVRSATNEDLGVVIKRAVFQLHPSFNNPTRVVESPPFELSESGWGEFEIA 549
           SEY SHKWTVYVRS TNEDLGVVIKRAVFQLH SFNNPTRVVESPPFELSE+GWGEFEIA
Sbjct: 67  SEYQSHKWTVYVRSPTNEDLGVVIKRAVFQLHSSFNNPTRVVESPPFELSEAGWGEFEIA 126

Query: 550 ISLFFHNDVCDKQLDLYHHLKLYPEEESGPQTTKKPVVVESYDEIVFSEPSEGFFARVQN 729
           I+L+F +DVCDK L+LYHHLKLYPE+ESGP + KKPVVVESYDEIVFSEPSEGFFARVQN
Sbjct: 127 ITLYFQSDVCDKPLNLYHHLKLYPEDESGPMSAKKPVVVESYDEIVFSEPSEGFFARVQN 186

Query: 730 HPAVNVPRLPATFSLLPQGLIDNVNDRRRGDTKDHPLGQWFMNFSEADELLKLAAARQQI 909
           HPAV VPRLPA FSL P   +++VN+++R D+KD+PL QWF NFSEADELL+LAAARQQ+
Sbjct: 187 HPAVIVPRLPAGFSLPPPVPLEDVNEKKRFDSKDNPLNQWFKNFSEADELLQLAAARQQV 246

Query: 910 QTHIVKLRRQLSLLDAQPQQSNPISGQ 990
           Q HI KLRRQ+S++D Q QQ  P S Q
Sbjct: 247 QAHIAKLRRQISVIDGQHQQLKPTSDQ 273


>ref|XP_003537632.1| PREDICTED: protein AF-9 homolog [Glycine max]
          Length = 279

 Score =  395 bits (1016), Expect = e-107
 Identities = 198/275 (72%), Positives = 225/275 (81%), Gaps = 1/275 (0%)
 Frame = +1

Query: 166 LTTTMPLTAGRKHGSDLSDG-SVSKLQRTKSTRPNEEYEKKIVNRKMKDVEISVPIVYGT 342
           ++ + PL   R+      DG S  K  R K   P+E+ +KK  NR++KDVEI VPIVYGT
Sbjct: 1   MSNSNPLPLKRQGEQSSDDGASAIKPSRLKIAIPSEDSDKKNANRRLKDVEICVPIVYGT 60

Query: 343 ISFWLGKKASEYHSHKWTVYVRSATNEDLGVVIKRAVFQLHPSFNNPTRVVESPPFELSE 522
           I+F+LG+KASE  SHKWTVYVR A+NEDLGVV+KR VFQLHPSFNNPTRVVESPPFELSE
Sbjct: 61  IAFYLGRKASESQSHKWTVYVRGASNEDLGVVVKRVVFQLHPSFNNPTRVVESPPFELSE 120

Query: 523 SGWGEFEIAISLFFHNDVCDKQLDLYHHLKLYPEEESGPQTTKKPVVVESYDEIVFSEPS 702
            GWGEFEIAI+L+FH+DVC+KQLDLYHHLKLYPE+ESGPQ+TKKPVVVESY+EIVF EPS
Sbjct: 121 CGWGEFEIAITLYFHSDVCEKQLDLYHHLKLYPEDESGPQSTKKPVVVESYNEIVFPEPS 180

Query: 703 EGFFARVQNHPAVNVPRLPATFSLLPQGLIDNVNDRRRGDTKDHPLGQWFMNFSEADELL 882
           E F ARVQNHPAVNVPRLPA  +L      D VND+ RGDTKDH L QWF+NFSEADELL
Sbjct: 181 EVFLARVQNHPAVNVPRLPAGLNLPSPVPSDTVNDKERGDTKDHLLTQWFLNFSEADELL 240

Query: 883 KLAAARQQIQTHIVKLRRQLSLLDAQPQQSNPISG 987
           KLAAARQQ+Q HIVKLRRQLSL++  PQ S P SG
Sbjct: 241 KLAAARQQVQAHIVKLRRQLSLVEGLPQLSKPPSG 275


>ref|XP_002269156.2| PREDICTED: protein AF-9 homolog [Vitis vinifera]
           gi|297735026|emb|CBI17388.3| unnamed protein product
           [Vitis vinifera]
          Length = 273

 Score =  395 bits (1014), Expect = e-107
 Identities = 191/270 (70%), Positives = 228/270 (84%)
 Frame = +1

Query: 181 PLTAGRKHGSDLSDGSVSKLQRTKSTRPNEEYEKKIVNRKMKDVEISVPIVYGTISFWLG 360
           P  +  ++ SD+S+ ++ KLQR    R  ++ EKKI NR++KDVEI VPI YGTISFWLG
Sbjct: 5   PSLSSPRNQSDVSESAI-KLQRLVMGRSTDDPEKKIPNRRLKDVEICVPISYGTISFWLG 63

Query: 361 KKASEYHSHKWTVYVRSATNEDLGVVIKRAVFQLHPSFNNPTRVVESPPFELSESGWGEF 540
           +KASE  SHKWTVYVR ATNEDLGVVI+RAVFQLHPSFNNP RVV+SPPFELSESGWGEF
Sbjct: 64  RKASESQSHKWTVYVRGATNEDLGVVIRRAVFQLHPSFNNPMRVVDSPPFELSESGWGEF 123

Query: 541 EIAISLFFHNDVCDKQLDLYHHLKLYPEEESGPQTTKKPVVVESYDEIVFSEPSEGFFAR 720
           EIAI+L+FH+DVCDKQLDL+HHLKLYPE+ESGPQ+TKKPVVVESY+EIVF +P + FFAR
Sbjct: 124 EIAITLYFHSDVCDKQLDLFHHLKLYPEDESGPQSTKKPVVVESYNEIVFPDPLDSFFAR 183

Query: 721 VQNHPAVNVPRLPATFSLLPQGLIDNVNDRRRGDTKDHPLGQWFMNFSEADELLKLAAAR 900
           V++HPAV VPRLPA+F+L     I+N  +++RGDTKDHPL QWF+NFSEADELLKLA AR
Sbjct: 184 VKDHPAVIVPRLPASFNLPAPVPIENAKEKKRGDTKDHPLNQWFVNFSEADELLKLATAR 243

Query: 901 QQIQTHIVKLRRQLSLLDAQPQQSNPISGQ 990
           QQ+Q HIVKLRRQLS++D  P+   P S +
Sbjct: 244 QQVQAHIVKLRRQLSVIDGLPRPLKPASDE 273


>gb|ACU19426.1| unknown [Glycine max]
          Length = 279

 Score =  393 bits (1010), Expect = e-107
 Identities = 197/275 (71%), Positives = 224/275 (81%), Gaps = 1/275 (0%)
 Frame = +1

Query: 166 LTTTMPLTAGRKHGSDLSDG-SVSKLQRTKSTRPNEEYEKKIVNRKMKDVEISVPIVYGT 342
           ++ + PL   R+      DG S  K  R K   P+E+ +KK  NR++KDVEI VPIVYGT
Sbjct: 1   MSNSNPLPLKRQGEQSSDDGASAIKPSRLKIAIPSEDSDKKNANRRLKDVEICVPIVYGT 60

Query: 343 ISFWLGKKASEYHSHKWTVYVRSATNEDLGVVIKRAVFQLHPSFNNPTRVVESPPFELSE 522
           I+F+LG+KASE  SHKWTVYVR A+NEDLGVV+KR VFQLHPSFNNPTRVVESPPFELSE
Sbjct: 61  IAFYLGRKASESQSHKWTVYVRGASNEDLGVVVKRVVFQLHPSFNNPTRVVESPPFELSE 120

Query: 523 SGWGEFEIAISLFFHNDVCDKQLDLYHHLKLYPEEESGPQTTKKPVVVESYDEIVFSEPS 702
            GWGEFEIAI+L+FH+DVC+KQLDLYHHLKLYPE+ESGPQ+TKKPVVVESY+EIVF EPS
Sbjct: 121 CGWGEFEIAITLYFHSDVCEKQLDLYHHLKLYPEDESGPQSTKKPVVVESYNEIVFPEPS 180

Query: 703 EGFFARVQNHPAVNVPRLPATFSLLPQGLIDNVNDRRRGDTKDHPLGQWFMNFSEADELL 882
           E F ARVQNHPAVNVPRLPA  +L      D VND+ RGD KDH L QWF+NFSEADELL
Sbjct: 181 EVFLARVQNHPAVNVPRLPAGLNLPSPVPSDTVNDKERGDPKDHLLTQWFLNFSEADELL 240

Query: 883 KLAAARQQIQTHIVKLRRQLSLLDAQPQQSNPISG 987
           KLAAARQQ+Q HIVKLRRQLSL++  PQ S P SG
Sbjct: 241 KLAAARQQVQAHIVKLRRQLSLVEGLPQLSKPPSG 275