BLASTX nr result

ID: Coptis24_contig00016196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016196
         (930 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263775.2| PREDICTED: uncharacterized protein LOC100247...   426   e-117
emb|CBI38444.3| unnamed protein product [Vitis vinifera]              426   e-117
emb|CAN68527.1| hypothetical protein VITISV_044224 [Vitis vinifera]   426   e-117
ref|XP_002509591.1| DNA binding protein, putative [Ricinus commu...   424   e-116
ref|XP_002329897.1| predicted protein [Populus trichocarpa] gi|2...   410   e-112

>ref|XP_002263775.2| PREDICTED: uncharacterized protein LOC100247282 [Vitis vinifera]
          Length = 672

 Score =  426 bits (1096), Expect = e-117
 Identities = 196/245 (80%), Positives = 218/245 (88%)
 Frame = -2

Query: 929  SEPLVKVLRMVDGDMPAMGYIYEGIEKAKVEIKAYYKGVEGKYMPLWDIIDRRWNLQLQS 750
            SEPLVKVLR+VDGDMPAMGYIYEGIE+AK+ IK YY  +E KYMP+WDIIDRRWN+QL S
Sbjct: 421  SEPLVKVLRIVDGDMPAMGYIYEGIERAKIAIKGYYNSIEEKYMPIWDIIDRRWNVQLHS 480

Query: 749  PLHAAAAFLNPSIFYNQNYKIDLKMRNGFQEAMVKMVTEDKDKIEFTKEHPMYINAHGAL 570
            PLHAAAAFLNPSIFY  N+K+DL+MRNGFQEAM KM TED+DKIE TKEHP+YINA GAL
Sbjct: 481  PLHAAAAFLNPSIFYGPNFKVDLRMRNGFQEAMRKMATEDRDKIEITKEHPIYINAQGAL 540

Query: 569  GSEFAILGRTLNSPGDWWAAYGYEIPTLQRAAIRILSQPSSSYWCRWNWRTFENIHTKKR 390
            G+EFAI+GRTLN+ GDWWA YGYEIPTLQRAAIRILSQP SS+WC WNW +FE +HTKKR
Sbjct: 541  GTEFAIMGRTLNAAGDWWAGYGYEIPTLQRAAIRILSQPCSSHWCGWNWSSFEALHTKKR 600

Query: 389  NKMENEKFNDLVYVHCNLRLQAVSQSIDGKCKPVNFDDIDVSSEWPTELESPSYLLDDSW 210
            N+ME EK NDLV VHCNL LQA+ QS DGKCKP+ FD+IDV SEWPTE+ESPS LLDDSW
Sbjct: 601  NRMELEKLNDLVLVHCNLHLQAIIQSRDGKCKPIIFDEIDVGSEWPTEMESPSPLLDDSW 660

Query: 209  LDNLP 195
            LDNLP
Sbjct: 661  LDNLP 665


>emb|CBI38444.3| unnamed protein product [Vitis vinifera]
          Length = 712

 Score =  426 bits (1096), Expect = e-117
 Identities = 196/245 (80%), Positives = 218/245 (88%)
 Frame = -2

Query: 929  SEPLVKVLRMVDGDMPAMGYIYEGIEKAKVEIKAYYKGVEGKYMPLWDIIDRRWNLQLQS 750
            SEPLVKVLR+VDGDMPAMGYIYEGIE+AK+ IK YY  +E KYMP+WDIIDRRWN+QL S
Sbjct: 461  SEPLVKVLRIVDGDMPAMGYIYEGIERAKIAIKGYYNSIEEKYMPIWDIIDRRWNVQLHS 520

Query: 749  PLHAAAAFLNPSIFYNQNYKIDLKMRNGFQEAMVKMVTEDKDKIEFTKEHPMYINAHGAL 570
            PLHAAAAFLNPSIFY  N+K+DL+MRNGFQEAM KM TED+DKIE TKEHP+YINA GAL
Sbjct: 521  PLHAAAAFLNPSIFYGPNFKVDLRMRNGFQEAMRKMATEDRDKIEITKEHPIYINAQGAL 580

Query: 569  GSEFAILGRTLNSPGDWWAAYGYEIPTLQRAAIRILSQPSSSYWCRWNWRTFENIHTKKR 390
            G+EFAI+GRTLN+ GDWWA YGYEIPTLQRAAIRILSQP SS+WC WNW +FE +HTKKR
Sbjct: 581  GTEFAIMGRTLNAAGDWWAGYGYEIPTLQRAAIRILSQPCSSHWCGWNWSSFEALHTKKR 640

Query: 389  NKMENEKFNDLVYVHCNLRLQAVSQSIDGKCKPVNFDDIDVSSEWPTELESPSYLLDDSW 210
            N+ME EK NDLV VHCNL LQA+ QS DGKCKP+ FD+IDV SEWPTE+ESPS LLDDSW
Sbjct: 641  NRMELEKLNDLVLVHCNLHLQAIIQSRDGKCKPIIFDEIDVGSEWPTEMESPSPLLDDSW 700

Query: 209  LDNLP 195
            LDNLP
Sbjct: 701  LDNLP 705


>emb|CAN68527.1| hypothetical protein VITISV_044224 [Vitis vinifera]
          Length = 926

 Score =  426 bits (1095), Expect = e-117
 Identities = 196/245 (80%), Positives = 218/245 (88%)
 Frame = -2

Query: 929  SEPLVKVLRMVDGDMPAMGYIYEGIEKAKVEIKAYYKGVEGKYMPLWDIIDRRWNLQLQS 750
            SEPLVKVLR+VDGDMPAMGYIYEGIE+AK+ IK YY  +E KYMP+WDIIDRRWN+QL S
Sbjct: 675  SEPLVKVLRIVDGDMPAMGYIYEGIERAKIAIKXYYNSIEEKYMPIWDIIDRRWNVQLHS 734

Query: 749  PLHAAAAFLNPSIFYNQNYKIDLKMRNGFQEAMVKMVTEDKDKIEFTKEHPMYINAHGAL 570
            PLHAAAAFLNPSIFY  N+K+DL+MRNGFQEAM KM TED+DKIE TKEHP+YINA GAL
Sbjct: 735  PLHAAAAFLNPSIFYGPNFKVDLRMRNGFQEAMRKMATEDRDKIEITKEHPIYINAQGAL 794

Query: 569  GSEFAILGRTLNSPGDWWAAYGYEIPTLQRAAIRILSQPSSSYWCRWNWRTFENIHTKKR 390
            G+EFAI+GRTLN+ GDWWA YGYEIPTLQRAAIRILSQP SS+WC WNW +FE +HTKKR
Sbjct: 795  GTEFAIMGRTLNAAGDWWAGYGYEIPTLQRAAIRILSQPCSSHWCGWNWSSFEALHTKKR 854

Query: 389  NKMENEKFNDLVYVHCNLRLQAVSQSIDGKCKPVNFDDIDVSSEWPTELESPSYLLDDSW 210
            N+ME EK NDLV VHCNL LQA+ QS DGKCKP+ FD+IDV SEWPTE+ESPS LLDDSW
Sbjct: 855  NRMELEKLNDLVLVHCNLHLQAIIQSRDGKCKPIIFDEIDVGSEWPTEMESPSPLLDDSW 914

Query: 209  LDNLP 195
            LDNLP
Sbjct: 915  LDNLP 919


>ref|XP_002509591.1| DNA binding protein, putative [Ricinus communis]
            gi|223549490|gb|EEF50978.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 670

 Score =  424 bits (1091), Expect = e-116
 Identities = 195/245 (79%), Positives = 218/245 (88%)
 Frame = -2

Query: 929  SEPLVKVLRMVDGDMPAMGYIYEGIEKAKVEIKAYYKGVEGKYMPLWDIIDRRWNLQLQS 750
            SEPL+K+LR+VDGDMPAMGYIYE +E+AKV IKAYYKG+E KYMP+W+IIDRRWN+QL S
Sbjct: 422  SEPLIKILRIVDGDMPAMGYIYEVLERAKVSIKAYYKGIEDKYMPIWEIIDRRWNIQLHS 481

Query: 749  PLHAAAAFLNPSIFYNQNYKIDLKMRNGFQEAMVKMVTEDKDKIEFTKEHPMYINAHGAL 570
            PLHAAAAFLNPSIFYNQN+KIDL+MRNGFQEAM+KM T D DKIE TKEHP+YIN  GAL
Sbjct: 482  PLHAAAAFLNPSIFYNQNFKIDLRMRNGFQEAMIKMATSDIDKIEITKEHPIYINGQGAL 541

Query: 569  GSEFAILGRTLNSPGDWWAAYGYEIPTLQRAAIRILSQPSSSYWCRWNWRTFENIHTKKR 390
            G++FAI+GRTLNSPGDWWA YGYEIPTLQR AIR+LSQP SS+WCRWNW TFE+IHTKKR
Sbjct: 542  GTDFAIMGRTLNSPGDWWAGYGYEIPTLQRVAIRLLSQPCSSHWCRWNWSTFESIHTKKR 601

Query: 389  NKMENEKFNDLVYVHCNLRLQAVSQSIDGKCKPVNFDDIDVSSEWPTELESPSYLLDDSW 210
            NK E EK NDLV+VHCNL LQA+ QS  G CKPV FD+IDVS EWPTELE  + LLDDSW
Sbjct: 602  NKAELEKLNDLVFVHCNLWLQAIYQSRVGNCKPVIFDEIDVSCEWPTELEPSTPLLDDSW 661

Query: 209  LDNLP 195
            LDNLP
Sbjct: 662  LDNLP 666


>ref|XP_002329897.1| predicted protein [Populus trichocarpa] gi|222871134|gb|EEF08265.1|
            predicted protein [Populus trichocarpa]
          Length = 668

 Score =  410 bits (1053), Expect = e-112
 Identities = 189/245 (77%), Positives = 216/245 (88%)
 Frame = -2

Query: 929  SEPLVKVLRMVDGDMPAMGYIYEGIEKAKVEIKAYYKGVEGKYMPLWDIIDRRWNLQLQS 750
            SEPL+K+LR+VDGDMPAMGYIYEGIE+AK  IKAYYKG+E KYMP+W+I+DR WN QL S
Sbjct: 422  SEPLIKILRIVDGDMPAMGYIYEGIERAKFAIKAYYKGIEEKYMPIWEIVDRGWNKQLHS 481

Query: 749  PLHAAAAFLNPSIFYNQNYKIDLKMRNGFQEAMVKMVTEDKDKIEFTKEHPMYINAHGAL 570
            PL AAAAFLNPSIFYN N  IDL+MRNGFQE M+KM T D+DKIE TKEHP+YINA GAL
Sbjct: 482  PLQAAAAFLNPSIFYNPNL-IDLRMRNGFQETMIKMATTDRDKIEITKEHPIYINAQGAL 540

Query: 569  GSEFAILGRTLNSPGDWWAAYGYEIPTLQRAAIRILSQPSSSYWCRWNWRTFENIHTKKR 390
            G+EFAI+GRTLNSPGDWWA YGYEIPTLQR AI+ILSQP SS+WCRWN  TFE++HTKKR
Sbjct: 541  GTEFAIMGRTLNSPGDWWAGYGYEIPTLQRVAIKILSQPCSSHWCRWNRSTFESVHTKKR 600

Query: 389  NKMENEKFNDLVYVHCNLRLQAVSQSIDGKCKPVNFDDIDVSSEWPTELESPSYLLDDSW 210
            N+ E EKFNDL++ HCNL LQA++QS DGKCKP+ +D+IDVSSEWPTELE  + LLDDSW
Sbjct: 601  NRAELEKFNDLLFAHCNLWLQAITQSHDGKCKPIIYDEIDVSSEWPTELEPSNPLLDDSW 660

Query: 209  LDNLP 195
            LDNLP
Sbjct: 661  LDNLP 665


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