BLASTX nr result

ID: Coptis24_contig00016186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016186
         (1158 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509847.1| conserved hypothetical protein [Ricinus comm...    64   6e-08
ref|XP_003631402.1| PREDICTED: uncharacterized protein LOC100854...    55   3e-07
gb|EAY95260.1| hypothetical protein OsI_17083 [Oryza sativa Indi...    59   2e-06
ref|XP_004143890.1| PREDICTED: uncharacterized protein LOC101214...    59   2e-06
tpg|DAA36355.1| TPA: hypothetical protein ZEAMMB73_795941, parti...    58   4e-06

>ref|XP_002509847.1| conserved hypothetical protein [Ricinus communis]
           gi|223549746|gb|EEF51234.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 98

 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 35/59 (59%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
 Frame = -3

Query: 316 TISPKKH-GNDIGEGGSPVTDEKAEPIVAFSKPP-LPPVMGPFLVFSLLEMVSGHDKND 146
           TI+PKKH  ND GEG     +EK +PIVAFS+PP LPPV GP +  SL EM S HD +D
Sbjct: 41  TITPKKHENNDFGEGRR--LNEKTDPIVAFSRPPQLPPVFGPLVALSLFEMWSSHDGDD 97


>ref|XP_003631402.1| PREDICTED: uncharacterized protein LOC100854417 [Vitis vinifera]
           gi|297742227|emb|CBI34376.3| unnamed protein product
           [Vitis vinifera]
          Length = 87

 Score = 55.5 bits (132), Expect(2) = 3e-07
 Identities = 29/58 (50%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
 Frame = -3

Query: 316 TISPKKHGNDIGEGGSPVTDEKAEPIVAFSKPP-LPPVMGPFLVFSLLEMVSGHDKND 146
           T + K+ GN+       +T+EK +PIVAFSKPP LPPV+GP +  SLLE     D ND
Sbjct: 29  TSTLKREGNNDFREQGTITNEKIDPIVAFSKPPPLPPVLGPLVALSLLEAWWSRDSND 86



 Score = 26.6 bits (57), Expect(2) = 3e-07
 Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = -1

Query: 483 MRGTTGLLTAKNILKGTL--RGRWGN 412
           MRGT  LL AKN LK     +G WG+
Sbjct: 1   MRGTAALLPAKNKLKQIYPPKGTWGS 26


>gb|EAY95260.1| hypothetical protein OsI_17083 [Oryza sativa Indica Group]
          Length = 150

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
 Frame = -3

Query: 319 MTIS-PKKHGNDIGEGGSPVT-DEKAEPIVAFSKPP-LPPVMGPFLVFSLLEMVSGHDKN 149
           MTI+ P+KHG +     S +T DE  EP+VAFS+PP LPPV+GP ++ SL  M SG D+N
Sbjct: 89  MTITTPQKHGKENNSNDSVLTKDENIEPLVAFSRPPPLPPVLGPLIMLSLFNMSSGGDEN 148


>ref|XP_004143890.1| PREDICTED: uncharacterized protein LOC101214491 [Cucumis sativus]
          Length = 119

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
 Frame = -3

Query: 325 GTMTISPKKHG--NDIGEGGSPVTDEKAEPIVAFSKPP-LPPVMGPFLVFSLLEMVSGHD 155
           G++T + ++ G  ND  EG S VT EKA+PI AFS+PP LPP++GP  VFSLLE     D
Sbjct: 57  GSLTSTVQRQGMKND-SEGESVVTKEKADPIAAFSRPPPLPPLLGPLAVFSLLETYLSPD 115

Query: 154 KND 146
            ND
Sbjct: 116 GND 118


>tpg|DAA36355.1| TPA: hypothetical protein ZEAMMB73_795941, partial [Zea mays]
          Length = 153

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
 Frame = -3

Query: 310 SPKKHGNDIGEGGSPVT-DEKAEPIVAFSKPP-LPPVMGPFLVFSLLEMVSGHDKND 146
           +P++HGN+     S VT DE  EP+VAFS+PP LPPV+GP +V S+ EM SG    D
Sbjct: 95  TPQRHGNENTSSESVVTKDENVEPLVAFSRPPPLPPVLGPLVVLSVFEMSSGGGDED 151


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