BLASTX nr result

ID: Coptis24_contig00016183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016183
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268894.1| PREDICTED: protease 4-like [Vitis vinifera]       127   1e-27
gb|ABK95679.1| unknown [Populus trichocarpa]                          111   6e-23
ref|XP_002322054.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
ref|XP_003522978.1| PREDICTED: protease 4-like [Glycine max]          108   4e-22
ref|XP_003595673.1| Protease [Medicago truncatula] gi|355484721|...   108   5e-22

>ref|XP_002268894.1| PREDICTED: protease 4-like [Vitis vinifera]
          Length = 686

 Score =  127 bits (318), Expect = 1e-27
 Identities = 75/149 (50%), Positives = 99/149 (66%), Gaps = 4/149 (2%)
 Frame = -1

Query: 437 QRTLSLILRKPPTPFHIQLTSSFPHSQIFKPSRFRQVFPTTSTAHGRRNLSVRA-EKIGE 261
           +R+ + IL KP     + ++S  P    F PS+ +      S +  RRNLS+RA +   E
Sbjct: 15  RRSCAAILSKPLRSIRV-VSSLQPQ---FSPSKPQNALSYFSPSLHRRNLSLRAFDSSSE 70

Query: 260 SVSGLESEV---KDVGDNNGSLKGGVKKEEYPSGEFEFKEFTGWQNFVVKCKMLFAWPWE 90
           + S + SE    KD  D++G+L      EEYP+G+FEFKE +GW +FVVK +ML A+PWE
Sbjct: 71  TKSDVVSEEAGEKDYKDDDGALSSTSLAEEYPTGDFEFKEMSGWMSFVVKLRMLIAFPWE 130

Query: 89  RVKKGSVLTIKLRGQISDQLKSRFSSGLS 3
           RV+KGSV T+KLRGQISDQLKSRFSSGLS
Sbjct: 131 RVRKGSVFTMKLRGQISDQLKSRFSSGLS 159


>gb|ABK95679.1| unknown [Populus trichocarpa]
          Length = 625

 Score =  111 bits (278), Expect = 6e-23
 Identities = 65/141 (46%), Positives = 85/141 (60%)
 Frame = -1

Query: 425 SLILRKPPTPFHIQLTSSFPHSQIFKPSRFRQVFPTTSTAHGRRNLSVRAEKIGESVSGL 246
           S++ +KPP        +  P   +F+ +     F + S++   R  SVRA    +S +  
Sbjct: 38  SILSKKPP--------NLSPSLALFRKATLSSSFLSPSSSFRCRTFSVRAFDSDDSKTEQ 89

Query: 245 ESEVKDVGDNNGSLKGGVKKEEYPSGEFEFKEFTGWQNFVVKCKMLFAWPWERVKKGSVL 66
           E E K+      S       E+YPSGEF+F+E   W  F+VK KML A+PWERV+KGSVL
Sbjct: 90  EEEKKE------SFHVKKSDEDYPSGEFDFQEIGAWNRFLVKLKMLIAFPWERVRKGSVL 143

Query: 65  TIKLRGQISDQLKSRFSSGLS 3
           T+KLRGQISDQLKSRFSSGLS
Sbjct: 144 TMKLRGQISDQLKSRFSSGLS 164


>ref|XP_002322054.1| predicted protein [Populus trichocarpa] gi|222869050|gb|EEF06181.1|
           predicted protein [Populus trichocarpa]
          Length = 691

 Score =  110 bits (276), Expect = 1e-22
 Identities = 66/141 (46%), Positives = 87/141 (61%)
 Frame = -1

Query: 425 SLILRKPPTPFHIQLTSSFPHSQIFKPSRFRQVFPTTSTAHGRRNLSVRAEKIGESVSGL 246
           S++ +KPP      L+SS     +++ +     F + S++   R  SVRA    +S +  
Sbjct: 38  SILSKKPPN-----LSSSLA---LYRKATLSSSFLSPSSSFRCRTFSVRAFDSDDSKTEQ 89

Query: 245 ESEVKDVGDNNGSLKGGVKKEEYPSGEFEFKEFTGWQNFVVKCKMLFAWPWERVKKGSVL 66
           E E K+      S       E+YPSGEF+F+E   W  F+VK KML A+PWERV+KGSVL
Sbjct: 90  EEEKKE------SFHVKKSDEDYPSGEFDFQEIGAWNRFLVKLKMLIAFPWERVRKGSVL 143

Query: 65  TIKLRGQISDQLKSRFSSGLS 3
           T+KLRGQISDQLKSRFSSGLS
Sbjct: 144 TMKLRGQISDQLKSRFSSGLS 164


>ref|XP_003522978.1| PREDICTED: protease 4-like [Glycine max]
          Length = 683

 Score =  108 bits (271), Expect = 4e-22
 Identities = 70/166 (42%), Positives = 98/166 (59%), Gaps = 13/166 (7%)
 Frame = -1

Query: 461 MSKLVFTPQRTLSLILRKPPTP-----------FHIQLTSSFPHSQIFKPSRFRQVFPTT 315
           MSKL+  P   L+  + +  T            F + L S   HS    P+ FR +   T
Sbjct: 1   MSKLLLLPTPPLTTSIHRFNTSSSASALQFQCRFSLSLLSRLHHS----PTSFRSLVRRT 56

Query: 314 STAHGRRNLSVRA-EKIGESVSGLESEVKDVGDNNGSLKGG-VKKEEYPSGEFEFKEFTG 141
                 R+L +RA +   ++ S  + EVK+  +   +  G  +  E+YPSG+F+F+  TG
Sbjct: 57  ------RDLPLRAFDSSSDANSEEKEEVKENEEGVDNRSGSRIADEDYPSGQFDFEPVTG 110

Query: 140 WQNFVVKCKMLFAWPWERVKKGSVLTIKLRGQISDQLKSRFSSGLS 3
           W++F+VK KML A+PWERV+KGSVLT+KLRGQISDQ+KSRFS GLS
Sbjct: 111 WRSFLVKLKMLVAFPWERVQKGSVLTMKLRGQISDQVKSRFSPGLS 156


>ref|XP_003595673.1| Protease [Medicago truncatula] gi|355484721|gb|AES65924.1| Protease
           [Medicago truncatula]
          Length = 670

 Score =  108 bits (270), Expect = 5e-22
 Identities = 67/143 (46%), Positives = 88/143 (61%), Gaps = 9/143 (6%)
 Frame = -1

Query: 404 PTPFHIQ-------LTSSFPHSQIFKPSRFR-QVFPTTSTAHGRRN-LSVRAEKIGESVS 252
           PTP H+        L+SS   S +   SRF    F +      RR  +S+RA     S S
Sbjct: 7   PTPPHLTSLYRRNTLSSSSSSSSLQFHSRFSFSSFHSLPQTRSRRTCISIRAFD-SSSDS 65

Query: 251 GLESEVKDVGDNNGSLKGGVKKEEYPSGEFEFKEFTGWQNFVVKCKMLFAWPWERVKKGS 72
            +E +V   G+     K  +  E+YPSGEFEF+  TGW+NFVVK +M  A+PWER++KGS
Sbjct: 66  KIEEKVVQEGE-----KVRIADEDYPSGEFEFEPITGWRNFVVKVRMFIAYPWERIRKGS 120

Query: 71  VLTIKLRGQISDQLKSRFSSGLS 3
           VLT+KLRG+ISDQ+KS+FS GLS
Sbjct: 121 VLTMKLRGEISDQVKSKFSPGLS 143


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