BLASTX nr result
ID: Coptis24_contig00016166
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00016166
(684 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE75905.1| OSJNBa0088I22.18 [Oryza sativa Japonica Group] 196 9e-63
gb|ABA95797.1| retrotransposon protein, putative, unclassified [... 198 3e-62
gb|ABA95230.1| retrotransposon protein, putative, unclassified [... 193 1e-61
emb|CAN68682.1| hypothetical protein VITISV_024814 [Vitis vinifera] 204 5e-61
emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera] 201 6e-61
>emb|CAE75905.1| OSJNBa0088I22.18 [Oryza sativa Japonica Group]
Length = 624
Score = 196 bits (499), Expect(2) = 9e-63
Identities = 90/144 (62%), Positives = 115/144 (79%)
Frame = -2
Query: 575 ISNYVSYHALSPSYHAFLTSLASVTVPTSVSDALSHPQWRDAMNEELQALEKNQTWELVS 396
I+NYVSY +LS +Y AF+TSL SV +P +A P+W AM EEL+ALEKN+TW+LV
Sbjct: 354 IANYVSYASLSSTYKAFVTSLNSVEIPNDWREAKQDPRWHQAMLEELEALEKNKTWDLVP 413
Query: 395 LPPGRKAVDCRWIFTVKQNPNGSINKYKARLVAKGYAQTRGVNYQETFAPVAKIDTIHVL 216
P G+K V+C+W++TVKQNP+G++ +YKARLVAKGY+QT G++Y ETFAPVAKI T+ L
Sbjct: 414 FPKGKKVVNCKWVYTVKQNPDGNVERYKARLVAKGYSQTYGIDYDETFAPVAKISTVRTL 473
Query: 215 ISVAANKSWPMFQLDVKNAFLNGD 144
IS AAN WP+ QLDVKNAFL+GD
Sbjct: 474 ISCAANFDWPLHQLDVKNAFLHGD 497
Score = 70.1 bits (170), Expect(2) = 9e-63
Identities = 32/47 (68%), Positives = 37/47 (78%)
Frame = -1
Query: 144 LKEEVYMRTPPGFRSPHSDGMVYRLKRSLYGLKQSPRAWSDRFGNAM 4
L+EEVYM PPGF + ++G V RLK+SLYGLKQSPRAW DRF AM
Sbjct: 498 LQEEVYMEIPPGFATSQTEGKVLRLKKSLYGLKQSPRAWFDRFRRAM 544
>gb|ABA95797.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1588
Score = 198 bits (504), Expect(2) = 3e-62
Identities = 91/158 (57%), Positives = 118/158 (74%)
Frame = -2
Query: 617 PIAIRKERRKCTYPISNYVSYHALSPSYHAFLTSLASVTVPTSVSDALSHPQWRDAMNEE 438
PI + E + I+NY+SY +SP+Y AF+ SL V +P A P+W+DAM EE
Sbjct: 1039 PIRLGFEHLSSRHDIANYISYSHISPAYKAFIASLQIVPIPKDWRCAKQDPRWKDAMKEE 1098
Query: 437 LQALEKNQTWELVSLPPGRKAVDCRWIFTVKQNPNGSINKYKARLVAKGYAQTRGVNYQE 258
L+ALEKN+TWELV LP G++AV C+W+FTVKQ P G +++YKARLVAKGY+QT G++Y E
Sbjct: 1099 LRALEKNKTWELVKLPMGKRAVGCKWVFTVKQTPEGKVDRYKARLVAKGYSQTYGIDYDE 1158
Query: 257 TFAPVAKIDTIHVLISVAANKSWPMFQLDVKNAFLNGD 144
TFAPVAK+ T+ +LIS A N WP+ QLDVKNAFL+GD
Sbjct: 1159 TFAPVAKMSTVRILISCAVNFGWPLHQLDVKNAFLHGD 1196
Score = 66.2 bits (160), Expect(2) = 3e-62
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = -1
Query: 144 LKEEVYMRTPPGFRSPHSDGMVYRLKRSLYGLKQSPRAWSDRFGNAM 4
L+EEVYM PPGF + + G V RLK+SLYGLKQSPRAW DRF A+
Sbjct: 1197 LQEEVYMEIPPGFGNSQTVGKVCRLKKSLYGLKQSPRAWFDRFRRAL 1243
>gb|ABA95230.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 936
Score = 193 bits (490), Expect(2) = 1e-61
Identities = 88/144 (61%), Positives = 114/144 (79%)
Frame = -2
Query: 575 ISNYVSYHALSPSYHAFLTSLASVTVPTSVSDALSHPQWRDAMNEELQALEKNQTWELVS 396
I+NYVSY +LS +Y AF+TSL SV +P +A P+W AM EEL+ALEKN+TW+LV
Sbjct: 401 IANYVSYASLSSTYKAFVTSLNSVEIPNDWREAKQDPRWHQAMLEELEALEKNKTWDLVP 460
Query: 395 LPPGRKAVDCRWIFTVKQNPNGSINKYKARLVAKGYAQTRGVNYQETFAPVAKIDTIHVL 216
P G+K V+C+W++TVKQNP+G++ +YKARLVAKGY+QT G++Y ETFAPVAK+ + L
Sbjct: 461 FPKGKKVVNCKWVYTVKQNPDGNVERYKARLVAKGYSQTYGIDYDETFAPVAKMSMVRTL 520
Query: 215 ISVAANKSWPMFQLDVKNAFLNGD 144
IS AAN WP+ QLDVKNAFL+GD
Sbjct: 521 ISCAANFDWPLHQLDVKNAFLHGD 544
Score = 70.1 bits (170), Expect(2) = 1e-61
Identities = 32/47 (68%), Positives = 37/47 (78%)
Frame = -1
Query: 144 LKEEVYMRTPPGFRSPHSDGMVYRLKRSLYGLKQSPRAWSDRFGNAM 4
L+EEVYM PPGF + ++G V RLK+SLYGLKQSPRAW DRF AM
Sbjct: 545 LQEEVYMEIPPGFATSQTEGKVLRLKKSLYGLKQSPRAWFDRFRRAM 591
>emb|CAN68682.1| hypothetical protein VITISV_024814 [Vitis vinifera]
Length = 1248
Score = 204 bits (519), Expect(2) = 5e-61
Identities = 93/164 (56%), Positives = 131/164 (79%), Gaps = 4/164 (2%)
Frame = -2
Query: 623 DRPIAIRKERRKCT----YPISNYVSYHALSPSYHAFLTSLASVTVPTSVSDALSHPQWR 456
D PI +RK R+CT YP+++++S+ SPS+ AFL SL ++++PT+VS+AL+ +W+
Sbjct: 724 DLPIVVRKGIRECTNQPLYPLTHFLSFKKFSPSHRAFLVSLNTISIPTTVSEALTDEKWK 783
Query: 455 DAMNEELQALEKNQTWELVSLPPGRKAVDCRWIFTVKQNPNGSINKYKARLVAKGYAQTR 276
AMN E++ALEKN+TWELV LP G+K V C+W++TVK +GSI +YKARLVAKGYAQT
Sbjct: 784 QAMNVEMEALEKNKTWELVKLPTGKKPVGCKWVYTVKYRADGSIERYKARLVAKGYAQTY 843
Query: 275 GVNYQETFAPVAKIDTIHVLISVAANKSWPMFQLDVKNAFLNGD 144
G++YQETFAPVAK++T+ VL+S+ AN +W + Q DVKNAFL+G+
Sbjct: 844 GIDYQETFAPVAKMNTVRVLLSLTANYNWDLQQFDVKNAFLHGE 887
Score = 56.6 bits (135), Expect(2) = 5e-61
Identities = 24/48 (50%), Positives = 35/48 (72%)
Frame = -1
Query: 144 LKEEVYMRTPPGFRSPHSDGMVYRLKRSLYGLKQSPRAWSDRFGNAMV 1
L+EE+YM PPG+ + + +V +LK++LYGLKQSPRAW RF ++
Sbjct: 888 LEEEIYMEVPPGYDNNLAAHIVCKLKKALYGLKQSPRAWFGRFARVII 935
>emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera]
Length = 1493
Score = 201 bits (510), Expect(2) = 6e-61
Identities = 91/162 (56%), Positives = 128/162 (79%), Gaps = 1/162 (0%)
Frame = -2
Query: 626 NDRPIAIRKERRKCT-YPISNYVSYHALSPSYHAFLTSLASVTVPTSVSDALSHPQWRDA 450
+D PIAIRK+ R CT +PISN VSY++LS AF T+L + +P ++ +A P+W++A
Sbjct: 940 DDLPIAIRKQPRSCTLHPISNXVSYNSLSAKCRAFTTNLDRIQLPKNIQEAFEIPEWKEA 999
Query: 449 MNEELQALEKNQTWELVSLPPGRKAVDCRWIFTVKQNPNGSINKYKARLVAKGYAQTRGV 270
+ EE++ALEKN+TWE+++LP G+K V C+WIFTVK +G++ +YKARLVAKG+ QT G+
Sbjct: 1000 VMEEIRALEKNETWEVMNLPRGKKPVGCKWIFTVKYKADGTVERYKARLVAKGFTQTYGI 1059
Query: 269 NYQETFAPVAKIDTIHVLISVAANKSWPMFQLDVKNAFLNGD 144
+Y ETFAPVAK++TI VL+S+AAN WP+ Q D+KNAFLNG+
Sbjct: 1060 DYTETFAPVAKLNTIRVLLSLAANLDWPLHQFDIKNAFLNGE 1101
Score = 59.7 bits (143), Expect(2) = 6e-61
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = -1
Query: 144 LKEEVYMRTPPGFRSPHSDGMVYRLKRSLYGLKQSPRAWSDRFGNAM 4
L+EEV+M PPGF + V +LK+SLYGLKQSPRAW DRF +
Sbjct: 1102 LEEEVFMMLPPGFCKEEEETRVCKLKKSLYGLKQSPRAWFDRFAKVI 1148