BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016164
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635077.1| PREDICTED: uncharacterized protein LOC100855...    87   1e-15
emb|CBI40924.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002524359.1| RNA binding protein, putative [Ricinus commu...    85   7e-15
ref|NP_193496.1| tRNA/rRNA methyltransferase (SpoU) family prote...    70   2e-10
ref|XP_002868048.1| tRNA/rRNA methyltransferase family protein [...    70   2e-10

>ref|XP_003635077.1| PREDICTED: uncharacterized protein LOC100855390 [Vitis vinifera]
          Length = 920

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/80 (52%), Positives = 59/80 (73%)
 Frame = -3

Query: 247 LVMASDRSLMPKAEDRHWLETLIICFLENINELLAVGMLARSRRAILMNWKWLCLNSLLS 68
           L+  +D+S++ KAE +  L++L++ FL++IN LL  G LAR+RRAILMNWKW CL SLLS
Sbjct: 249 LIGENDKSMLQKAEGKPLLDSLVLTFLQDINSLLGFGALARTRRAILMNWKWHCLESLLS 308

Query: 67  ILCWMMENEVHPDNAATFVS 8
           I  + ++N VH +  ATF S
Sbjct: 309 IPYYALKNGVHLEPCATFFS 328


>emb|CBI40924.3| unnamed protein product [Vitis vinifera]
          Length = 1203

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/80 (52%), Positives = 59/80 (73%)
 Frame = -3

Query: 247 LVMASDRSLMPKAEDRHWLETLIICFLENINELLAVGMLARSRRAILMNWKWLCLNSLLS 68
           L+  +D+S++ KAE +  L++L++ FL++IN LL  G LAR+RRAILMNWKW CL SLLS
Sbjct: 379 LIGENDKSMLQKAEGKPLLDSLVLTFLQDINSLLGFGALARTRRAILMNWKWHCLESLLS 438

Query: 67  ILCWMMENEVHPDNAATFVS 8
           I  + ++N VH +  ATF S
Sbjct: 439 IPYYALKNGVHLEPCATFFS 458


>ref|XP_002524359.1| RNA binding protein, putative [Ricinus communis]
            gi|223536320|gb|EEF37970.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 1744

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/71 (57%), Positives = 53/71 (74%)
 Frame = -3

Query: 247  LVMASDRSLMPKAEDRHWLETLIICFLENINELLAVGMLARSRRAILMNWKWLCLNSLLS 68
            L+  SD+S    AE++ WL+ L++ FL+NIN LLAVG+L RSRRA+L+NWKWLCL SLLS
Sbjct: 924  LIRDSDKS-SSSAEEKAWLDQLVLSFLQNINNLLAVGVLVRSRRAVLLNWKWLCLESLLS 982

Query: 67   ILCWMMENEVH 35
            I  +  EN  H
Sbjct: 983  IPHYAFENGPH 993


>ref|NP_193496.1| tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis
            thaliana] gi|332658520|gb|AEE83920.1| tRNA/rRNA
            methyltransferase (SpoU) family protein [Arabidopsis
            thaliana]
          Length = 1850

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 30/81 (37%), Positives = 49/81 (60%)
 Frame = -3

Query: 244  VMASDRSLMPKAEDRHWLETLIICFLENINELLAVGMLARSRRAILMNWKWLCLNSLLSI 65
            ++ +D +L+   +   WL+  +  F+ NIN LL  G+L RSRRA+L++WKWLC+ SLLS+
Sbjct: 1024 LLENDSTLLSMVDGEFWLQVSVPAFVRNINHLLTAGVLVRSRRAVLLSWKWLCVESLLSV 1083

Query: 64   LCWMMENEVHPDNAATFVSTT 2
            +  +    +  D  + F   T
Sbjct: 1084 MHILDARRIPEDRKSFFSDDT 1104


>ref|XP_002868048.1| tRNA/rRNA methyltransferase family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297313884|gb|EFH44307.1| tRNA/rRNA
            methyltransferase family protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1852

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 28/61 (45%), Positives = 43/61 (70%)
 Frame = -3

Query: 244  VMASDRSLMPKAEDRHWLETLIICFLENINELLAVGMLARSRRAILMNWKWLCLNSLLSI 65
            ++ +D +L+   +   WL+  +  FL NIN LL  G+L RSRRA+L++WKWLC+ SLLS+
Sbjct: 1032 LLENDNTLLTMVDGEFWLQVSVPAFLHNINHLLTAGVLVRSRRAVLLSWKWLCVESLLSV 1091

Query: 64   L 62
            +
Sbjct: 1092 M 1092