BLASTX nr result

ID: Coptis24_contig00016153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016153
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263908.2| PREDICTED: LRR receptor-like serine/threonin...    89   4e-16
ref|XP_003632830.1| PREDICTED: leucine-rich repeat receptor prot...    84   9e-15
emb|CBI36388.3| unnamed protein product [Vitis vinifera]               84   9e-15
ref|XP_002283141.2| PREDICTED: LRR receptor-like serine/threonin...    84   2e-14
emb|CBI36377.3| unnamed protein product [Vitis vinifera]               84   2e-14

>ref|XP_002263908.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           GSO1-like [Vitis vinifera]
          Length = 1047

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 52/114 (45%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
 Frame = +2

Query: 2   LANNSINGDILFPSSPMVNLTLIDISNNQIQGKLPTNIGDIFPXXXXXXXXXXXXEGRIP 181
           L NNS NG    PS P + L  +DIS N   G L  N G++ P            EG+IP
Sbjct: 471 LRNNSFNGQFPLPSYPNMLLLSVDISKNNFSGLLQENFGEMLPCLEWLNLAENAFEGQIP 530

Query: 182 NL-SNIKDLWTLDLSNNNFSGEIPESLAMS-SNLIVLILSNNRLDGQISPNLFN 337
            L  NI  LW LDLS+NNFSGE+P  L +  +NL VL LS+NR  G I    FN
Sbjct: 531 PLICNISSLWFLDLSSNNFSGEVPAQLTVGCTNLYVLKLSDNRFHGPIFSTQFN 584


>ref|XP_003632830.1| PREDICTED: leucine-rich repeat receptor protein kinase EXS-like
           [Vitis vinifera]
          Length = 1062

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
 Frame = +2

Query: 2   LANNSINGDILFPSSPMVNLTLIDISNNQIQGKLPTNIGDIFPXXXXXXXXXXXXEGRIP 181
           L NNS+ G +L P  P   +  +DIS+NQ+ G+L  N+G + P            EG +P
Sbjct: 541 LRNNSLMGQLL-PLGPNTRINSLDISHNQLDGQLQENVGHMIPNMEYLNLSNNGFEGILP 599

Query: 182 N-LSNIKDLWTLDLSNNNFSGEIPESLAMSSNLIVLILSNNRLDGQISPNLFN 337
           + ++ ++ LW LDLS NNFSGE+P+ L  + +L  L LSNN+  G+I    FN
Sbjct: 600 SSIAELRALWILDLSTNNFSGEVPKQLLAAKDLGYLKLSNNKFHGEIFSRDFN 652



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 40/114 (35%), Positives = 64/114 (56%), Gaps = 5/114 (4%)
 Frame = +2

Query: 2   LANNSINGDILFPS---SPMVNLTLIDISNNQIQGKLPTNIGDIFPXXXXXXXXXXXXEG 172
           ++NN I G  LFPS   + + NL L+D+S N   G +P++I  +               G
Sbjct: 133 VSNNYIEG--LFPSQDFASLSNLELLDLSYNSFSGSVPSSIR-LMSSLKSLSLARNHLNG 189

Query: 173 RIPN--LSNIKDLWTLDLSNNNFSGEIPESLAMSSNLIVLILSNNRLDGQISPN 328
            +PN   +++ +L  LDLS+N+FSG +P S+ + S+L  L L+ N L+G + PN
Sbjct: 190 SLPNQDFASLSNLELLDLSHNSFSGILPSSIRLLSSLKSLYLAGNHLNGSL-PN 242



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 36/109 (33%), Positives = 54/109 (49%)
 Frame = +2

Query: 2    LANNSINGDILFPSSPMVNLTLIDISNNQIQGKLPTNIGDIFPXXXXXXXXXXXXEGRIP 181
            ++NN ++G+I      M  LT + + NN  +GKLP  I  ++              G +P
Sbjct: 685  VSNNYMSGEIPSQIGNMTYLTTLVLGNNSFKGKLPPEISQLW-GLEFLDVSQNALSGSLP 743

Query: 182  NLSNIKDLWTLDLSNNNFSGEIPESLAMSSNLIVLILSNNRLDGQISPN 328
             L  ++ L  L L  N F+G IP     SS+L+ L + +NRL G I PN
Sbjct: 744  CLKTMESLKHLHLQGNMFTGLIPRYFLNSSHLLTLDMRDNRLFGSI-PN 791


>emb|CBI36388.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
 Frame = +2

Query: 2   LANNSINGDILFPSSPMVNLTLIDISNNQIQGKLPTNIGDIFPXXXXXXXXXXXXEGRIP 181
           L NNS+ G +L P  P   +  +DIS+NQ+ G+L  N+G + P            EG +P
Sbjct: 67  LRNNSLMGQLL-PLGPNTRINSLDISHNQLDGQLQENVGHMIPNMEYLNLSNNGFEGILP 125

Query: 182 N-LSNIKDLWTLDLSNNNFSGEIPESLAMSSNLIVLILSNNRLDGQISPNLFN 337
           + ++ ++ LW LDLS NNFSGE+P+ L  + +L  L LSNN+  G+I    FN
Sbjct: 126 SSIAELRALWILDLSTNNFSGEVPKQLLAAKDLGYLKLSNNKFHGEIFSRDFN 178


>ref|XP_002283141.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
            GSO1-like [Vitis vinifera]
          Length = 1464

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 49/113 (43%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
 Frame = +2

Query: 2    LANNSINGDILFPSSPMVNLTLIDISNNQIQGKLPTNIGDIFPXXXXXXXXXXXXEGRIP 181
            L NNS+ G    P  P +  + IDISNN +QG++P+NI    P            EG IP
Sbjct: 900  LKNNSLTGYFHLPYRPNIFTSAIDISNNLLQGQMPSNISVSLPNLMFLNVSRNSFEGSIP 959

Query: 182  NLSNIKDLWTLDLSNNNFSGEIPESLAMS-SNLIVLILSNNRLDGQISPNLFN 337
            +   ++ L  LDLSNN F+G IPE LAM   +L  LILS N L GQ+ P + N
Sbjct: 960  SFGGMRKLLFLDLSNNLFTGGIPEDLAMGCPSLEYLILSKNDLHGQMFPRVSN 1012


>emb|CBI36377.3| unnamed protein product [Vitis vinifera]
          Length = 1188

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
 Frame = +2

Query: 2    LANNSINGDILFPSSPMVNLTLIDISNNQIQGKLPTNIGDIFPXXXXXXXXXXXXEGRIP 181
            L NNS+ G +L P  P   +  +DIS+NQ+ G+L  N+  + P            EG +P
Sbjct: 704  LRNNSLMGQLL-PLGPNTRINSLDISHNQLDGQLQENVAHMIPNIMFLNLSNNGFEGILP 762

Query: 182  N-LSNIKDLWTLDLSNNNFSGEIPESLAMSSNLIVLILSNNRLDGQISPNLFN 337
            + ++ ++ LW LDLS NNFSGE+P+ L  + +L +L LSNN+  G+I    FN
Sbjct: 763  SSIAELRALWILDLSTNNFSGEVPKQLLATKDLGILKLSNNKFHGEIFSRDFN 815


Top