BLASTX nr result

ID: Coptis24_contig00016144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016144
         (1471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|2FON|A Chain A, X-Ray Crystal Structure Of Leacx1, An Acyl-C...   291   e-112
ref|NP_001234198.1| peroxisomal acyl-CoA oxidase 1A [Solanum lyc...   291   e-112
gb|AAW78691.1| peroxisomal acyl-CoA oxidase 1A [Solanum cheesman...   291   e-112
ref|XP_002879567.1| acyl-CoA oxidase 5 [Arabidopsis lyrata subsp...   284   e-106
ref|NP_181112.1| acyl-CoA oxidase [Arabidopsis thaliana] gi|6228...   281   e-104

>pdb|2FON|A Chain A, X-Ray Crystal Structure Of Leacx1, An Acyl-Coa Oxidase
           From Lycopersicon Esculentum (Tomato)
           gi|109157677|pdb|2FON|B Chain B, X-Ray Crystal Structure
           Of Leacx1, An Acyl-Coa Oxidase From Lycopersicon
           Esculentum (Tomato) gi|109157678|pdb|2FON|C Chain C,
           X-Ray Crystal Structure Of Leacx1, An Acyl-Coa Oxidase
           From Lycopersicon Esculentum (Tomato)
          Length = 683

 Score =  291 bits (746), Expect(2) = e-112
 Identities = 139/174 (79%), Positives = 156/174 (89%)
 Frame = -3

Query: 803 RVSQITREGKVTQSDVPRQLVYGTMVYVRQTIVSAASCALSQAVSVAMRYSTVRRQFGSQ 624
           RVSQ+T+EGK  QSD+PRQL+YGTMVYVRQ+IV+ AS A+S+AV +A RYS VRRQFGSQ
Sbjct: 276 RVSQVTKEGKYVQSDIPRQLLYGTMVYVRQSIVADASLAMSRAVCIATRYSAVRRQFGSQ 335

Query: 623 DGGLETQVIDYKTQQSRLFPLLATTYAYRFVGEWLKWLYKDVTQRLQSCDFSTLPEAHAC 444
           +GG ETQVIDYKTQQ+RLFPLLA+ YA+RFVGEWLKWLY DVTQRL + DFSTLPEAHAC
Sbjct: 336 NGGQETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLAANDFSTLPEAHAC 395

Query: 443 TAGLKSLTTSTTADGIEECRKLCGGHGYLCSSGLPELFAFYVPACTYDDTKEII 282
           TAGLKSLTTS TADGIEECRKLCGGHGYLCSSGLPELFA YVPACTY+    ++
Sbjct: 396 TAGLKSLTTSATADGIEECRKLCGGHGYLCSSGLPELFAVYVPACTYEGDNVVL 449



 Score =  143 bits (360), Expect(2) = e-112
 Identities = 67/99 (67%), Positives = 82/99 (82%)
 Frame = -2

Query: 297 YEGDNFVLLLQVARFLMKTVSQLGSGKKLFGTTAYIGRIEYMLQCNCDSQRAEDWIKPSI 118
           YEGDN VL LQVARFLMKT+SQLG+GKK  GT +Y+GRIE+++QC  D ++AEDW+KPS 
Sbjct: 442 YEGDNVVLQLQVARFLMKTISQLGTGKKPVGTVSYMGRIEHLMQCRSDVKQAEDWLKPSA 501

Query: 117 IFEAFETRSARMSFACAQNISKMPRSEEGFTELSSDLVE 1
           + EAFE RSARMS ACA+N+SK    EEGF EL++DLVE
Sbjct: 502 VLEAFEARSARMSVACAKNLSKFENQEEGFAELAADLVE 540


>ref|NP_001234198.1| peroxisomal acyl-CoA oxidase 1A [Solanum lycopersicum]
           gi|58531948|gb|AAW78689.1| peroxisomal acyl-CoA oxidase
           1A [Solanum lycopersicum]
          Length = 664

 Score =  291 bits (746), Expect(2) = e-112
 Identities = 139/174 (79%), Positives = 156/174 (89%)
 Frame = -3

Query: 803 RVSQITREGKVTQSDVPRQLVYGTMVYVRQTIVSAASCALSQAVSVAMRYSTVRRQFGSQ 624
           RVSQ+T+EGK  QSD+PRQL+YGTMVYVRQ+IV+ AS A+S+AV +A RYS VRRQFGSQ
Sbjct: 257 RVSQVTKEGKYVQSDIPRQLLYGTMVYVRQSIVADASLAMSRAVCIATRYSAVRRQFGSQ 316

Query: 623 DGGLETQVIDYKTQQSRLFPLLATTYAYRFVGEWLKWLYKDVTQRLQSCDFSTLPEAHAC 444
           +GG ETQVIDYKTQQ+RLFPLLA+ YA+RFVGEWLKWLY DVTQRL + DFSTLPEAHAC
Sbjct: 317 NGGQETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLAANDFSTLPEAHAC 376

Query: 443 TAGLKSLTTSTTADGIEECRKLCGGHGYLCSSGLPELFAFYVPACTYDDTKEII 282
           TAGLKSLTTS TADGIEECRKLCGGHGYLCSSGLPELFA YVPACTY+    ++
Sbjct: 377 TAGLKSLTTSATADGIEECRKLCGGHGYLCSSGLPELFAVYVPACTYEGDNVVL 430



 Score =  143 bits (360), Expect(2) = e-112
 Identities = 67/99 (67%), Positives = 82/99 (82%)
 Frame = -2

Query: 297 YEGDNFVLLLQVARFLMKTVSQLGSGKKLFGTTAYIGRIEYMLQCNCDSQRAEDWIKPSI 118
           YEGDN VL LQVARFLMKT+SQLG+GKK  GT +Y+GRIE+++QC  D ++AEDW+KPS 
Sbjct: 423 YEGDNVVLQLQVARFLMKTISQLGTGKKPVGTVSYMGRIEHLMQCRSDVKQAEDWLKPSA 482

Query: 117 IFEAFETRSARMSFACAQNISKMPRSEEGFTELSSDLVE 1
           + EAFE RSARMS ACA+N+SK    EEGF EL++DLVE
Sbjct: 483 VLEAFEARSARMSVACAKNLSKFENQEEGFAELAADLVE 521


>gb|AAW78691.1| peroxisomal acyl-CoA oxidase 1A [Solanum cheesmaniae]
          Length = 664

 Score =  291 bits (745), Expect(2) = e-112
 Identities = 139/174 (79%), Positives = 156/174 (89%)
 Frame = -3

Query: 803 RVSQITREGKVTQSDVPRQLVYGTMVYVRQTIVSAASCALSQAVSVAMRYSTVRRQFGSQ 624
           RVSQ+T+EGK  QSD+PRQL+YGTMVYVRQ+IV+ AS A+S+AV +A RYS VRRQFGSQ
Sbjct: 257 RVSQVTKEGKYIQSDIPRQLLYGTMVYVRQSIVADASLAMSRAVCIATRYSAVRRQFGSQ 316

Query: 623 DGGLETQVIDYKTQQSRLFPLLATTYAYRFVGEWLKWLYKDVTQRLQSCDFSTLPEAHAC 444
           +GG ETQVIDYKTQQ+RLFPLLA+ YA+RFVGEWLKWLY DVTQRL + DFSTLPEAHAC
Sbjct: 317 NGGQETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTQRLAANDFSTLPEAHAC 376

Query: 443 TAGLKSLTTSTTADGIEECRKLCGGHGYLCSSGLPELFAFYVPACTYDDTKEII 282
           TAGLKSLTTS TADGIEECRKLCGGHGYLCSSGLPELFA YVPACTY+    ++
Sbjct: 377 TAGLKSLTTSATADGIEECRKLCGGHGYLCSSGLPELFAVYVPACTYEGDNVVL 430



 Score =  143 bits (360), Expect(2) = e-112
 Identities = 67/99 (67%), Positives = 82/99 (82%)
 Frame = -2

Query: 297 YEGDNFVLLLQVARFLMKTVSQLGSGKKLFGTTAYIGRIEYMLQCNCDSQRAEDWIKPSI 118
           YEGDN VL LQVARFLMKT+SQLG+GKK  GT +Y+GRIE+++QC  D ++AEDW+KPS 
Sbjct: 423 YEGDNVVLQLQVARFLMKTISQLGTGKKPVGTVSYMGRIEHLMQCRSDVKQAEDWLKPSA 482

Query: 117 IFEAFETRSARMSFACAQNISKMPRSEEGFTELSSDLVE 1
           + EAFE RSARMS ACA+N+SK    EEGF EL++DLVE
Sbjct: 483 VLEAFEARSARMSVACAKNLSKFENQEEGFAELAADLVE 521


>ref|XP_002879567.1| acyl-CoA oxidase 5 [Arabidopsis lyrata subsp. lyrata]
           gi|297325406|gb|EFH55826.1| acyl-CoA oxidase 5
           [Arabidopsis lyrata subsp. lyrata]
          Length = 664

 Score =  284 bits (726), Expect(2) = e-106
 Identities = 135/174 (77%), Positives = 154/174 (88%)
 Frame = -3

Query: 803 RVSQITREGKVTQSDVPRQLVYGTMVYVRQTIVSAASCALSQAVSVAMRYSTVRRQFGSQ 624
           R+S++TREGK   SDVPRQLVYGTMVYVRQ+IVS AS AL++AV +A RYS VRRQFGSQ
Sbjct: 257 RLSKVTREGKYVASDVPRQLVYGTMVYVRQSIVSNASTALARAVCIATRYSAVRRQFGSQ 316

Query: 623 DGGLETQVIDYKTQQSRLFPLLATTYAYRFVGEWLKWLYKDVTQRLQSCDFSTLPEAHAC 444
           DGG+ETQVIDYKTQQ+RLFPLLA+ YA+RFVGEWLKWLY DVT+RL + DF+TLPEAHAC
Sbjct: 317 DGGIETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTKRLDTSDFATLPEAHAC 376

Query: 443 TAGLKSLTTSTTADGIEECRKLCGGHGYLCSSGLPELFAFYVPACTYDDTKEII 282
           TAGLKS+TTS T+DGIEECRKLCGGHGYL  SGLPELFA YVPACTY+    ++
Sbjct: 377 TAGLKSMTTSATSDGIEECRKLCGGHGYLWCSGLPELFAVYVPACTYEGDNVVL 430



 Score =  129 bits (323), Expect(2) = e-106
 Identities = 61/99 (61%), Positives = 75/99 (75%)
 Frame = -2

Query: 297 YEGDNFVLLLQVARFLMKTVSQLGSGKKLFGTTAYIGRIEYMLQCNCDSQRAEDWIKPSI 118
           YEGDN VL LQVARFLMKTVSQLGSGK   GTTAY+GR +++LQC    + AEDW+ P +
Sbjct: 423 YEGDNVVLQLQVARFLMKTVSQLGSGKAPSGTTAYMGRAKHLLQCRSSVRNAEDWLNPGM 482

Query: 117 IFEAFETRSARMSFACAQNISKMPRSEEGFTELSSDLVE 1
           + EAFE R+ RM+  CA N+SK    E+GF+EL +DLVE
Sbjct: 483 VLEAFEARALRMAVTCANNLSKFENQEQGFSELLADLVE 521


>ref|NP_181112.1| acyl-CoA oxidase [Arabidopsis thaliana]
           gi|62286640|sp|Q9ZQP2.1|ACO12_ARATH RecName:
           Full=Putative peroxisomal acyl-coenzyme A oxidase 1.2
           gi|4263786|gb|AAD15446.1| putative acyl-CoA oxidase
           [Arabidopsis thaliana] gi|18377807|gb|AAL67053.1|
           putative acyl-CoA oxidase [Arabidopsis thaliana]
           gi|20465713|gb|AAM20325.1| putative acyl-CoA oxidase
           [Arabidopsis thaliana] gi|330254051|gb|AEC09145.1|
           acyl-CoA oxidase [Arabidopsis thaliana]
          Length = 664

 Score =  281 bits (718), Expect(2) = e-104
 Identities = 133/174 (76%), Positives = 154/174 (88%)
 Frame = -3

Query: 803 RVSQITREGKVTQSDVPRQLVYGTMVYVRQTIVSAASCALSQAVSVAMRYSTVRRQFGSQ 624
           R+S++TREGK   SDVPRQLVYGTMVYVRQ+IVS AS AL++AV +A RYS VRRQFGS 
Sbjct: 257 RLSKVTREGKYVASDVPRQLVYGTMVYVRQSIVSNASTALARAVCIATRYSAVRRQFGSH 316

Query: 623 DGGLETQVIDYKTQQSRLFPLLATTYAYRFVGEWLKWLYKDVTQRLQSCDFSTLPEAHAC 444
           DGG+ETQVI+YKTQQ+RLFPLLA+ YA+RFVGEWLKWLY DVT+RL++ DF+TLPEAHAC
Sbjct: 317 DGGIETQVINYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTKRLEASDFATLPEAHAC 376

Query: 443 TAGLKSLTTSTTADGIEECRKLCGGHGYLCSSGLPELFAFYVPACTYDDTKEII 282
           TAGLKS+TTS T+DGIEECRKLCGGHGYL  SGLPELFA YVPACTY+    ++
Sbjct: 377 TAGLKSMTTSATSDGIEECRKLCGGHGYLWCSGLPELFAVYVPACTYEGDNVVL 430



 Score =  127 bits (318), Expect(2) = e-104
 Identities = 60/99 (60%), Positives = 75/99 (75%)
 Frame = -2

Query: 297 YEGDNFVLLLQVARFLMKTVSQLGSGKKLFGTTAYIGRIEYMLQCNCDSQRAEDWIKPSI 118
           YEGDN VL LQVARFLMKTVSQLGSGK   GTTAY+GR +++LQC+   + A DW+ P +
Sbjct: 423 YEGDNVVLQLQVARFLMKTVSQLGSGKAPSGTTAYMGRAKHLLQCSSGVRNARDWLNPGM 482

Query: 117 IFEAFETRSARMSFACAQNISKMPRSEEGFTELSSDLVE 1
           + EAFE R+ RM+  CA N+SK    E+GF+EL +DLVE
Sbjct: 483 VLEAFEARALRMAVTCANNLSKFENQEQGFSELLADLVE 521


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