BLASTX nr result

ID: Coptis24_contig00016137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016137
         (839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24668.3| unnamed protein product [Vitis vinifera]              204   3e-50
ref|XP_002273791.1| PREDICTED: uncharacterized protein C3B8.09-l...   204   3e-50
ref|XP_002530574.1| something about silencing protein sas10, put...   189   5e-46
gb|AAT39972.1| Putative Sas10/Utp3 family protein, identical [So...   186   6e-45
gb|ABI34329.1| Integrase core domain containing protein [Solanum...   182   1e-43

>emb|CBI24668.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  204 bits (518), Expect = 3e-50
 Identities = 114/201 (56%), Positives = 139/201 (69%), Gaps = 17/201 (8%)
 Frame = -3

Query: 825  LSNGRSSSMHSTKLLKVVAPKLNKLKVVSGDDDLPKRDDIGERRRKHELRVLANAGVXXX 646
            L+NG++ S+ S+KL  +V+  + K K+VSGDDDLPKRDDIGERRRKHELRVLA AG+   
Sbjct: 518  LTNGQAGSLPSSKLSHLVSANMKKPKIVSGDDDLPKRDDIGERRRKHELRVLAGAGIEPM 577

Query: 645  XXXXXXXXXXXXXXXXE--------------FYEQVKKQKISKLSAKAELYSRTPWGPSS 508
                                           FY+QVK+ + +KL+AK E+YSRT    +S
Sbjct: 578  DDDEDGICTVDVDKDANMDDNDSGTEESEDEFYKQVKQLRAAKLAAKEEIYSRTSAAQTS 637

Query: 507  AEPEIV-DGKRQITRQIEKNRGLTRSRKK--QNPRTKYKEKHQKKVNRRKGQVRGIKKPT 337
            AEPEI+ DGKRQI+ Q+EKN+GLTR+RKK  +NPR KYK KHQK V RRKGQVR I+K T
Sbjct: 638  AEPEILEDGKRQISYQMEKNKGLTRARKKLTKNPRKKYKLKHQKAVVRRKGQVREIRKAT 697

Query: 336  GPYGGEATGINAGISRSIRLK 274
            GPYGGEATGIN GI+RSIR K
Sbjct: 698  GPYGGEATGINVGITRSIRFK 718


>ref|XP_002273791.1| PREDICTED: uncharacterized protein C3B8.09-like [Vitis vinifera]
          Length = 669

 Score =  204 bits (518), Expect = 3e-50
 Identities = 114/201 (56%), Positives = 139/201 (69%), Gaps = 17/201 (8%)
 Frame = -3

Query: 825  LSNGRSSSMHSTKLLKVVAPKLNKLKVVSGDDDLPKRDDIGERRRKHELRVLANAGVXXX 646
            L+NG++ S+ S+KL  +V+  + K K+VSGDDDLPKRDDIGERRRKHELRVLA AG+   
Sbjct: 468  LTNGQAGSLPSSKLSHLVSANMKKPKIVSGDDDLPKRDDIGERRRKHELRVLAGAGIEPM 527

Query: 645  XXXXXXXXXXXXXXXXE--------------FYEQVKKQKISKLSAKAELYSRTPWGPSS 508
                                           FY+QVK+ + +KL+AK E+YSRT    +S
Sbjct: 528  DDDEDGICTVDVDKDANMDDNDSGTEESEDEFYKQVKQLRAAKLAAKEEIYSRTSAAQTS 587

Query: 507  AEPEIV-DGKRQITRQIEKNRGLTRSRKK--QNPRTKYKEKHQKKVNRRKGQVRGIKKPT 337
            AEPEI+ DGKRQI+ Q+EKN+GLTR+RKK  +NPR KYK KHQK V RRKGQVR I+K T
Sbjct: 588  AEPEILEDGKRQISYQMEKNKGLTRARKKLTKNPRKKYKLKHQKAVVRRKGQVREIRKAT 647

Query: 336  GPYGGEATGINAGISRSIRLK 274
            GPYGGEATGIN GI+RSIR K
Sbjct: 648  GPYGGEATGINVGITRSIRFK 668


>ref|XP_002530574.1| something about silencing protein sas10, putative [Ricinus communis]
            gi|223529873|gb|EEF31804.1| something about silencing
            protein sas10, putative [Ricinus communis]
          Length = 639

 Score =  189 bits (481), Expect = 5e-46
 Identities = 107/201 (53%), Positives = 132/201 (65%), Gaps = 15/201 (7%)
 Frame = -3

Query: 837  GNANLSNGRSSSMHSTKLLKVVAPKLNKLKVVSGDDDLPKRDDIGERRRKHELRVLANAG 658
            GN  LSNG++S + S+KL ++V+ K NK K +SGDDDLPKRDDIGERRRKHE+RVLA AG
Sbjct: 440  GNHGLSNGQASLLGSSKLSQLVSAKANKPKAISGDDDLPKRDDIGERRRKHEIRVLAGAG 499

Query: 657  VXXXXXXXXXXXXXXXXXXXE-------------FYEQVKKQKISKLSAKAELYSRTPWG 517
            V                   +             FY+++K+++ +K  AKAE Y+R P  
Sbjct: 500  VKSEDDAIHEPGTLETDEPSDMEEDGDTGGSGDEFYKEIKQKRDAKFVAKAEKYARKPTV 559

Query: 516  PSSAEPEIVDGKRQITRQIEKNRGLTRSRKK--QNPRTKYKEKHQKKVNRRKGQVRGIKK 343
            P  A PE +DGKR ITRQIEKN GLTR R+K  +NPR KY+ KH K+  R KGQV+ I+K
Sbjct: 560  P--ALPETIDGKRHITRQIEKNIGLTRQRRKDLKNPRKKYRTKHDKQKKRWKGQVQQIRK 617

Query: 342  PTGPYGGEATGINAGISRSIR 280
            P G YGGE TGINA ISRSIR
Sbjct: 618  PDGSYGGETTGINAAISRSIR 638


>gb|AAT39972.1| Putative Sas10/Utp3 family protein, identical [Solanum demissum]
          Length = 746

 Score =  186 bits (472), Expect = 6e-45
 Identities = 103/185 (55%), Positives = 125/185 (67%), Gaps = 13/185 (7%)
 Frame = -3

Query: 789  KLLKVVAPKLNKLKVVSGDDDLPKRDDIGERRRKHELRVLANAGVXXXXXXXXXXXXXXX 610
            KL +++ P++ + K++SGDDDLPKRDDIGERRRKHELRVLA AGV               
Sbjct: 562  KLSRLLTPQVARPKIISGDDDLPKRDDIGERRRKHELRVLAGAGVEPTDDVNDEPGDHAS 621

Query: 609  XXXXE-----------FYEQVKKQKISKLSAKAELYSRTPWGPSSAEPEIVDGKRQITRQ 463
                            FY +V+KQ  +KL+AK  +YSRTP   S+ E  +VDGKRQI  Q
Sbjct: 622  DDVATSDDSEMDSDMEFYREVEKQHSAKLAAKENMYSRTPAMLSTPET-VVDGKRQINYQ 680

Query: 462  IEKNRGLTRSRKKQ--NPRTKYKEKHQKKVNRRKGQVRGIKKPTGPYGGEATGINAGISR 289
            +EKNRGLTR+RKKQ  NPR KY+ KH+K   RR+GQV+ IKKP+GPYGGE TGIN GISR
Sbjct: 681  MEKNRGLTRNRKKQDKNPRKKYRGKHEKAQKRREGQVQKIKKPSGPYGGETTGINVGISR 740

Query: 288  SIRLK 274
            SIR K
Sbjct: 741  SIRFK 745


>gb|ABI34329.1| Integrase core domain containing protein [Solanum demissum]
          Length = 1775

 Score =  182 bits (461), Expect = 1e-43
 Identities = 101/185 (54%), Positives = 125/185 (67%), Gaps = 13/185 (7%)
 Frame = -3

Query: 789  KLLKVVAPKLNKLKVVSGDDDLPKRDDIGERRRKHELRVLANAGVXXXXXXXXXXXXXXX 610
            KL +++  ++ + K++SGDDDLPKRDDIGERRRKHELRVLA AGV               
Sbjct: 1591 KLSRLLTSQVARPKIISGDDDLPKRDDIGERRRKHELRVLAGAGVEPTDDVNDEPGDHAS 1650

Query: 609  XXXXE-----------FYEQVKKQKISKLSAKAELYSRTPWGPSSAEPEIVDGKRQITRQ 463
                            FY +V+KQ  +KL+AK ++YSR+P   S+ E  +VDGKRQI  Q
Sbjct: 1651 DDVATSDDSEMDSDMEFYREVEKQHSAKLAAKEKMYSRSPAMLSTPET-VVDGKRQINYQ 1709

Query: 462  IEKNRGLTRSRKKQ--NPRTKYKEKHQKKVNRRKGQVRGIKKPTGPYGGEATGINAGISR 289
            +EKNRGLTR+RKKQ  NPR KY+ KH+K   RR+GQV+ IKKP+GPYGGE TGIN GISR
Sbjct: 1710 MEKNRGLTRNRKKQDKNPRKKYRGKHEKAQKRREGQVQKIKKPSGPYGGETTGINVGISR 1769

Query: 288  SIRLK 274
            SIR K
Sbjct: 1770 SIRFK 1774


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