BLASTX nr result

ID: Coptis24_contig00016132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016132
         (1203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269195.1| PREDICTED: uncharacterized protein LOC100265...   316   e-101
ref|XP_002519376.1| conserved hypothetical protein [Ricinus comm...   303   1e-97
ref|XP_003529690.1| PREDICTED: uncharacterized protein LOC100804...   303   1e-94
gb|ABK96167.1| unknown [Populus trichocarpa]                          293   2e-94
ref|NP_178346.2| uncharacterized protein [Arabidopsis thaliana] ...   301   1e-93

>ref|XP_002269195.1| PREDICTED: uncharacterized protein LOC100265963 [Vitis vinifera]
            gi|297739435|emb|CBI29617.3| unnamed protein product
            [Vitis vinifera]
          Length = 282

 Score =  316 bits (810), Expect(2) = e-101
 Identities = 154/181 (85%), Positives = 167/181 (92%)
 Frame = +2

Query: 512  TSQGIETAVPVLLVDGYNVCGYWTKLKKHFMNGRLDIARQKLIDELITFSTLREVKVVVV 691
            T+QGI+TAVPVLLVDGYNVCGYW KLKKHF+NGRLDIARQKLIDEL+TFS LREVKVVVV
Sbjct: 97   TNQGIDTAVPVLLVDGYNVCGYWMKLKKHFVNGRLDIARQKLIDELVTFSLLREVKVVVV 156

Query: 692  FDALMSRFPTHKEDFAGIDVVFSSESCADAWIEKEVVALKEDGCPKVWVVTSDRCQQQAA 871
            FDA+MS  PTHKE+FAGIDVV+S ESCADAWIEKEVVAL+EDGCPKVWVVTSD CQQQAA
Sbjct: 157  FDAMMSGLPTHKENFAGIDVVYSGESCADAWIEKEVVALREDGCPKVWVVTSDNCQQQAA 216

Query: 872  HGAGAFIWSSKALVTEIKASQKEFEKMLHEHRSNSVQGKLLKHNLDSGVVDALKDLRSKL 1051
            HGAGAF+WS KALV+EIKAS KE E+ML E RS S+QGKLLKHNLD+ VVDALKDLR KL
Sbjct: 217  HGAGAFVWSCKALVSEIKASHKEVERMLQEQRSTSMQGKLLKHNLDAEVVDALKDLRKKL 276

Query: 1052 S 1054
            S
Sbjct: 277  S 277



 Score = 81.6 bits (200), Expect(2) = e-101
 Identities = 45/82 (54%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
 Frame = +1

Query: 202 KFMARRKKSC---TPSKDSDLGARRITSNVKQNLQFLKLWREFHXXXXXXXXXXXXYRKK 372
           K +AR KKS    +P K S+    RIT+NVKQNLQFLKLW+EF             YR+K
Sbjct: 14  KIVARSKKSSQQPSPYKGSESTPPRITTNVKQNLQFLKLWKEFQKRKSSTPKPATSYRRK 73

Query: 373 KGQKEEQLEDTELYLDPTVTLY 438
           K QK++  EDTELY DPTVTLY
Sbjct: 74  KVQKDDLPEDTELYHDPTVTLY 95


>ref|XP_002519376.1| conserved hypothetical protein [Ricinus communis]
            gi|223541443|gb|EEF42993.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 303

 Score =  303 bits (775), Expect(2) = 1e-97
 Identities = 151/181 (83%), Positives = 160/181 (88%)
 Frame = +2

Query: 512  TSQGIETAVPVLLVDGYNVCGYWTKLKKHFMNGRLDIARQKLIDELITFSTLREVKVVVV 691
            T+Q I+ AVPVLLVDGYNVCGYW KLKKHFMNGRLDIARQKLIDELITFS LREVKVV V
Sbjct: 116  TNQVIDDAVPVLLVDGYNVCGYWPKLKKHFMNGRLDIARQKLIDELITFSMLREVKVVAV 175

Query: 692  FDALMSRFPTHKEDFAGIDVVFSSESCADAWIEKEVVALKEDGCPKVWVVTSDRCQQQAA 871
            FDA+MS  PTHKE F GIDVVFS ESCADAWIEKEVVAL+EDGCPKVWVVTSDR QQ AA
Sbjct: 176  FDAMMSGLPTHKETFIGIDVVFSGESCADAWIEKEVVALREDGCPKVWVVTSDRMQQHAA 235

Query: 872  HGAGAFIWSSKALVTEIKASQKEFEKMLHEHRSNSVQGKLLKHNLDSGVVDALKDLRSKL 1051
            HGAGAF+WSSKALV+EIKAS KE E ML E R  S QG+LLKHNLDS VVDALKDLR+KL
Sbjct: 236  HGAGAFVWSSKALVSEIKASHKEVEMMLQEQRPTSFQGRLLKHNLDSEVVDALKDLRNKL 295

Query: 1052 S 1054
            +
Sbjct: 296  A 296



 Score = 81.6 bits (200), Expect(2) = 1e-97
 Identities = 45/88 (51%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
 Frame = +1

Query: 178 RSCYCAFPKFMARRKKSCTPS-KDSDLGARRITSNVKQNLQFLKLWREFHXXXXXXXXXX 354
           R+ Y      M + KK  +PS KD +    RITSN+KQNLQFLKLW+EF           
Sbjct: 27  RNTYYKIVIVMGKNKKPRSPSPKDPEPAPPRITSNLKQNLQFLKLWKEFQKRKSSTPKPA 86

Query: 355 XXYRKKKGQKEEQLEDTELYLDPTVTLY 438
             YRKKK QKE+  EDTELY DPT++LY
Sbjct: 87  TSYRKKKVQKEDLPEDTELYRDPTLSLY 114


>ref|XP_003529690.1| PREDICTED: uncharacterized protein LOC100804585 [Glycine max]
          Length = 286

 Score =  303 bits (775), Expect(2) = 1e-94
 Identities = 148/180 (82%), Positives = 160/180 (88%), Gaps = 1/180 (0%)
 Frame = +2

Query: 518  QGI-ETAVPVLLVDGYNVCGYWTKLKKHFMNGRLDIARQKLIDELITFSTLREVKVVVVF 694
            QGI + AVPVLLVDGYNVCGYW KLKKHF+ GRLDIARQKLIDEL+TFS LREVK+VVVF
Sbjct: 102  QGILDNAVPVLLVDGYNVCGYWMKLKKHFVKGRLDIARQKLIDELLTFSMLREVKIVVVF 161

Query: 695  DALMSRFPTHKEDFAGIDVVFSSESCADAWIEKEVVALKEDGCPKVWVVTSDRCQQQAAH 874
            DA+MS  PTHKEDFAG+D++FS E+CAD WIEKEV ALKEDGCPKVWVVTSD C QQAAH
Sbjct: 162  DAMMSGLPTHKEDFAGLDIIFSGETCADTWIEKEVAALKEDGCPKVWVVTSDHCHQQAAH 221

Query: 875  GAGAFIWSSKALVTEIKASQKEFEKMLHEHRSNSVQGKLLKHNLDSGVVDALKDLRSKLS 1054
            GAGAFIWS KALVTEIKASQKE E+ML E RS S QG+LLKHNLD+ VVDALKDLR KLS
Sbjct: 222  GAGAFIWSCKALVTEIKASQKEVERMLQEQRSTSFQGRLLKHNLDAEVVDALKDLRQKLS 281



 Score = 71.6 bits (174), Expect(2) = 1e-94
 Identities = 37/77 (48%), Positives = 49/77 (63%)
 Frame = +1

Query: 208 MARRKKSCTPSKDSDLGARRITSNVKQNLQFLKLWREFHXXXXXXXXXXXXYRKKKGQKE 387
           M R+K++    +DS+    RITSNVKQNL+FLKLW+ F             YRKKK +KE
Sbjct: 25  MVRKKQT----QDSESTPPRITSNVKQNLRFLKLWKSFQNRNSSTPRPSTSYRKKKVEKE 80

Query: 388 EQLEDTELYLDPTVTLY 438
           + + DT+LY DPT +LY
Sbjct: 81  DDVVDTDLYRDPTTSLY 97


>gb|ABK96167.1| unknown [Populus trichocarpa]
          Length = 297

 Score =  293 bits (749), Expect(2) = 2e-94
 Identities = 142/181 (78%), Positives = 158/181 (87%)
 Frame = +2

Query: 512  TSQGIETAVPVLLVDGYNVCGYWTKLKKHFMNGRLDIARQKLIDELITFSTLREVKVVVV 691
            T+Q +ET VPVLLVDGYNVCGYW KLKKHF+NGRLDIARQKLIDEL+ FS  R+VKVVVV
Sbjct: 110  TNQIVETGVPVLLVDGYNVCGYWAKLKKHFVNGRLDIARQKLIDELVAFSLARDVKVVVV 169

Query: 692  FDALMSRFPTHKEDFAGIDVVFSSESCADAWIEKEVVALKEDGCPKVWVVTSDRCQQQAA 871
            FDA+MS  PTHKE+FAG+DV+F+ ESCADAWIEKEVVALKEDGCPKVWVVTSD   Q AA
Sbjct: 170  FDAMMSGLPTHKENFAGVDVIFTGESCADAWIEKEVVALKEDGCPKVWVVTSDHIHQHAA 229

Query: 872  HGAGAFIWSSKALVTEIKASQKEFEKMLHEHRSNSVQGKLLKHNLDSGVVDALKDLRSKL 1051
            HGAGAFIWS KALV+E+KASQ+E E+ L E R  S QG+LLKHNLDS VVDALKDLR KL
Sbjct: 230  HGAGAFIWSCKALVSEVKASQQEVERALQELRPTSFQGRLLKHNLDSEVVDALKDLRKKL 289

Query: 1052 S 1054
            +
Sbjct: 290  A 290



 Score = 80.9 bits (198), Expect(2) = 2e-94
 Identities = 43/80 (53%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
 Frame = +1

Query: 208 MARRKKS---CTPSKDSDLGARRITSNVKQNLQFLKLWREFHXXXXXXXXXXXXYRKKKG 378
           MA+ KKS    +P+K S+    RITSNVKQNLQFLKLW+EF             YR+KK 
Sbjct: 29  MAKSKKSQPASSPNKGSESAPPRITSNVKQNLQFLKLWKEFQKRKSSTPKPSTSYRRKKV 88

Query: 379 QKEEQLEDTELYLDPTVTLY 438
           +KE+  EDTELY DPT++LY
Sbjct: 89  EKEDLPEDTELYRDPTLSLY 108


>ref|NP_178346.2| uncharacterized protein [Arabidopsis thaliana]
            gi|26449562|dbj|BAC41907.1| unknown protein [Arabidopsis
            thaliana] gi|28950879|gb|AAO63363.1| At2g02410
            [Arabidopsis thaliana] gi|330250483|gb|AEC05577.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 308

 Score =  301 bits (770), Expect(2) = 1e-93
 Identities = 146/182 (80%), Positives = 164/182 (90%), Gaps = 1/182 (0%)
 Frame = +2

Query: 512  TSQGI-ETAVPVLLVDGYNVCGYWTKLKKHFMNGRLDIARQKLIDELITFSTLREVKVVV 688
            T+QG+ + AVPVLLVDGYNVCGYW KLKKHFM GRLD+ARQKL+DEL++FS ++EVKVVV
Sbjct: 121  TNQGLLDDAVPVLLVDGYNVCGYWMKLKKHFMKGRLDVARQKLVDELVSFSMVKEVKVVV 180

Query: 689  VFDALMSRFPTHKEDFAGIDVVFSSESCADAWIEKEVVALKEDGCPKVWVVTSDRCQQQA 868
            VFDALMS  PTHKEDFAG+DV+FS E+CADAWIEKEVVAL+EDGCPKVWVVTSD CQQQA
Sbjct: 181  VFDALMSGLPTHKEDFAGVDVIFSGETCADAWIEKEVVALREDGCPKVWVVTSDVCQQQA 240

Query: 869  AHGAGAFIWSSKALVTEIKASQKEFEKMLHEHRSNSVQGKLLKHNLDSGVVDALKDLRSK 1048
            AHGAGA+IWSSKALV+EIK+  KE EKM+ E RS S QG+LLKHNLDS VVDALKDLR K
Sbjct: 241  AHGAGAYIWSSKALVSEIKSMHKEVEKMMQETRSTSFQGRLLKHNLDSEVVDALKDLRDK 300

Query: 1049 LS 1054
            LS
Sbjct: 301  LS 302



 Score = 70.1 bits (170), Expect(2) = 1e-93
 Identities = 44/102 (43%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
 Frame = +1

Query: 139 SWSGMSILFPLPYRSCYCAFPKFMARRKKSCTPS--KDSDLGARRITSNVKQNLQFLKLW 312
           +WS  S      Y SC     K   + KK    S  K+S+    RI SNVK NLQ LKLW
Sbjct: 22  NWSSSSC----SYDSCRVLVVKMGGKSKKPHQSSSFKESEPEPPRIKSNVKHNLQLLKLW 77

Query: 313 REFHXXXXXXXXXXXXYRKKKGQKEEQLEDTELYLDPTVTLY 438
           +EF             YRKKK +K+E  +D+ELY DPT TLY
Sbjct: 78  KEFQSRGSGMAKPATSYRKKKVEKDELPDDSELYRDPTNTLY 119


Top