BLASTX nr result

ID: Coptis24_contig00016126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016126
         (853 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003573276.1| PREDICTED: alcohol dehydrogenase-like [Brach...   293   3e-85
ref|NP_001060809.1| Os08g0109200 [Oryza sativa Japonica Group] g...   286   7e-83
ref|NP_001142329.1| hypothetical protein [Zea mays] gi|194708238...   284   5e-82
gb|AFW61439.1| hypothetical protein ZEAMMB73_501219 [Zea mays]        284   5e-82
ref|XP_002268625.1| PREDICTED: succinate-semialdehyde dehydrogen...   276   6e-82

>ref|XP_003573276.1| PREDICTED: alcohol dehydrogenase-like [Brachypodium distachyon]
          Length = 411

 Score =  293 bits (750), Expect(2) = 3e-85
 Identities = 147/186 (79%), Positives = 162/186 (87%)
 Frame = +2

Query: 2   GETRLFLRKNGEPVYMYSMGGLAEYCVVPAHALSPLPNSLPYTESAILGCAIFTAYGAMR 181
           GETRLFLR NG+PVYMYSMGGLAEYCVVPA+AL+ LP+SLPYTESAILGCA+FTAYGA+R
Sbjct: 163 GETRLFLRSNGKPVYMYSMGGLAEYCVVPANALAVLPSSLPYTESAILGCAVFTAYGALR 222

Query: 182 HAADMRXXXXXXXXXXXXXXSSCLQIARAFGASQIIAVDIQDDKLHNAKMLGATHTINAA 361
           HAA+MR              SSCLQ+ARAFGAS+IIAVD+ D+KL NAK LGATHT+NAA
Sbjct: 223 HAAEMRAGDSVAVIGVGGVGSSCLQVARAFGASEIIAVDVLDEKLQNAKTLGATHTVNAA 282

Query: 362 KEDAVEKIKEITGGMGVDIAVEALGKPRTFLQCTQSVRDGGKAVMIGLAPTNVIGEVDIT 541
           KEDAVE+IKEITGG GVD+AVEALGK  TF QCTQSVRDGGKAVMIGLA TNV+GEVDIT
Sbjct: 283 KEDAVERIKEITGGRGVDVAVEALGKALTFAQCTQSVRDGGKAVMIGLAATNVLGEVDIT 342

Query: 542 RLVRRQ 559
           RLVRRQ
Sbjct: 343 RLVRRQ 348



 Score = 48.9 bits (115), Expect(2) = 3e-85
 Identities = 22/40 (55%), Positives = 27/40 (67%)
 Frame = +1

Query: 661 TGIFDFNSAISRKCTLEEVDKVFQDLASGSIVGRAVVEIM 780
           +G F   +AISRKC  EE +  + DL  G I+GRAVVEIM
Sbjct: 372 SGAFSLENAISRKCKFEEANSAYDDLNQGKIIGRAVVEIM 411


>ref|NP_001060809.1| Os08g0109200 [Oryza sativa Japonica Group]
           gi|42408374|dbj|BAD09525.1| putative alcohol
           dehydrogenase (Zn containing)(adh-1) [Oryza sativa
           Japonica Group] gi|113622778|dbj|BAF22723.1|
           Os08g0109200 [Oryza sativa Japonica Group]
           gi|125559893|gb|EAZ05341.1| hypothetical protein
           OsI_27546 [Oryza sativa Indica Group]
           gi|125601940|gb|EAZ41265.1| hypothetical protein
           OsJ_25774 [Oryza sativa Japonica Group]
           gi|215678852|dbj|BAG95289.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 422

 Score =  286 bits (731), Expect(2) = 7e-83
 Identities = 143/186 (76%), Positives = 160/186 (86%)
 Frame = +2

Query: 2   GETRLFLRKNGEPVYMYSMGGLAEYCVVPAHALSPLPNSLPYTESAILGCAIFTAYGAMR 181
           G+TRLFLR NG+PVYMYSMGGLAEYCVVPA+AL+ LPNSLPYTESAILGCA+FTAYGA+R
Sbjct: 173 GQTRLFLRSNGKPVYMYSMGGLAEYCVVPANALAVLPNSLPYTESAILGCAVFTAYGALR 232

Query: 182 HAADMRXXXXXXXXXXXXXXSSCLQIARAFGASQIIAVDIQDDKLHNAKMLGATHTINAA 361
           HAA+MR              SSCLQIA+AFGAS++IAVD+ D+KL NA+ LGATHT+NAA
Sbjct: 233 HAAEMRAGDSVAVIGVGGVGSSCLQIAKAFGASEVIAVDVLDEKLQNARTLGATHTVNAA 292

Query: 362 KEDAVEKIKEITGGMGVDIAVEALGKPRTFLQCTQSVRDGGKAVMIGLAPTNVIGEVDIT 541
           KEDAVEKIKEIT G GVD+AVEALGK  TF QC +SVRDGGKAVMIGLA TNV+GEVDIT
Sbjct: 293 KEDAVEKIKEITDGRGVDVAVEALGKALTFSQCAKSVRDGGKAVMIGLAATNVMGEVDIT 352

Query: 542 RLVRRQ 559
           RLVRRQ
Sbjct: 353 RLVRRQ 358



 Score = 48.5 bits (114), Expect(2) = 7e-83
 Identities = 22/40 (55%), Positives = 28/40 (70%)
 Frame = +1

Query: 661 TGIFDFNSAISRKCTLEEVDKVFQDLASGSIVGRAVVEIM 780
           +G F+  + ISRKC  EE +  ++DL  G IVGRAVVEIM
Sbjct: 382 SGAFNLKNTISRKCKFEEANSAYEDLDRGKIVGRAVVEIM 421


>ref|NP_001142329.1| hypothetical protein [Zea mays] gi|194708238|gb|ACF88203.1| unknown
           [Zea mays] gi|413921508|gb|AFW61440.1| hypothetical
           protein ZEAMMB73_501219 [Zea mays]
          Length = 417

 Score =  284 bits (727), Expect(2) = 5e-82
 Identities = 143/186 (76%), Positives = 159/186 (85%)
 Frame = +2

Query: 2   GETRLFLRKNGEPVYMYSMGGLAEYCVVPAHALSPLPNSLPYTESAILGCAIFTAYGAMR 181
           GETRLFLR NG+PVYMYSMGGLAEYCVVPA+AL+ LP SLPYTESAILGCA+FTAYGA+R
Sbjct: 168 GETRLFLRGNGKPVYMYSMGGLAEYCVVPANALAVLPASLPYTESAILGCAVFTAYGALR 227

Query: 182 HAADMRXXXXXXXXXXXXXXSSCLQIARAFGASQIIAVDIQDDKLHNAKMLGATHTINAA 361
           HAA+MR              SSCLQIA+AFGAS++IAVD+ D+KL NA  LGATHT+NAA
Sbjct: 228 HAAEMRAGDSVAVIGVGGVGSSCLQIAKAFGASEVIAVDVLDEKLRNATTLGATHTVNAA 287

Query: 362 KEDAVEKIKEITGGMGVDIAVEALGKPRTFLQCTQSVRDGGKAVMIGLAPTNVIGEVDIT 541
           KEDAVE+IKEITGG GVD+AVEALGK  TF QC +SVRDGGKAVMIGLA TNV+GEVDIT
Sbjct: 288 KEDAVERIKEITGGRGVDVAVEALGKALTFSQCARSVRDGGKAVMIGLAATNVVGEVDIT 347

Query: 542 RLVRRQ 559
           RLVRRQ
Sbjct: 348 RLVRRQ 353



 Score = 47.4 bits (111), Expect(2) = 5e-82
 Identities = 21/40 (52%), Positives = 27/40 (67%)
 Frame = +1

Query: 661 TGIFDFNSAISRKCTLEEVDKVFQDLASGSIVGRAVVEIM 780
           +G F   + +SRKC  EE +  ++DL  G IVGRAVVEIM
Sbjct: 377 SGAFSLRNTVSRKCRFEEANGAYEDLDQGKIVGRAVVEIM 416


>gb|AFW61439.1| hypothetical protein ZEAMMB73_501219 [Zea mays]
          Length = 373

 Score =  284 bits (727), Expect(2) = 5e-82
 Identities = 143/186 (76%), Positives = 159/186 (85%)
 Frame = +2

Query: 2   GETRLFLRKNGEPVYMYSMGGLAEYCVVPAHALSPLPNSLPYTESAILGCAIFTAYGAMR 181
           GETRLFLR NG+PVYMYSMGGLAEYCVVPA+AL+ LP SLPYTESAILGCA+FTAYGA+R
Sbjct: 124 GETRLFLRGNGKPVYMYSMGGLAEYCVVPANALAVLPASLPYTESAILGCAVFTAYGALR 183

Query: 182 HAADMRXXXXXXXXXXXXXXSSCLQIARAFGASQIIAVDIQDDKLHNAKMLGATHTINAA 361
           HAA+MR              SSCLQIA+AFGAS++IAVD+ D+KL NA  LGATHT+NAA
Sbjct: 184 HAAEMRAGDSVAVIGVGGVGSSCLQIAKAFGASEVIAVDVLDEKLRNATTLGATHTVNAA 243

Query: 362 KEDAVEKIKEITGGMGVDIAVEALGKPRTFLQCTQSVRDGGKAVMIGLAPTNVIGEVDIT 541
           KEDAVE+IKEITGG GVD+AVEALGK  TF QC +SVRDGGKAVMIGLA TNV+GEVDIT
Sbjct: 244 KEDAVERIKEITGGRGVDVAVEALGKALTFSQCARSVRDGGKAVMIGLAATNVVGEVDIT 303

Query: 542 RLVRRQ 559
           RLVRRQ
Sbjct: 304 RLVRRQ 309



 Score = 47.4 bits (111), Expect(2) = 5e-82
 Identities = 21/40 (52%), Positives = 27/40 (67%)
 Frame = +1

Query: 661 TGIFDFNSAISRKCTLEEVDKVFQDLASGSIVGRAVVEIM 780
           +G F   + +SRKC  EE +  ++DL  G IVGRAVVEIM
Sbjct: 333 SGAFSLRNTVSRKCRFEEANGAYEDLDQGKIVGRAVVEIM 372


>ref|XP_002268625.1| PREDICTED: succinate-semialdehyde dehydrogenase (acetylating)-like
           [Vitis vinifera]
          Length = 421

 Score =  276 bits (706), Expect(2) = 6e-82
 Identities = 135/186 (72%), Positives = 153/186 (82%)
 Frame = +2

Query: 2   GETRLFLRKNGEPVYMYSMGGLAEYCVVPAHALSPLPNSLPYTESAILGCAIFTAYGAMR 181
           GETRLFLR NG+PV+MYSMGGLAEYCVVPAH L+ LP+SLPYTESAILGCA+FTAYGAM 
Sbjct: 173 GETRLFLRNNGKPVFMYSMGGLAEYCVVPAHGLTNLPDSLPYTESAILGCAVFTAYGAMA 232

Query: 182 HAADMRXXXXXXXXXXXXXXSSCLQIARAFGASQIIAVDIQDDKLHNAKMLGATHTINAA 361
           HAA++R              SSCLQIARAFGAS IIAVD+ D+KL NAK+ GA+HT+NA 
Sbjct: 233 HAAEVRPGNSVAVIGIGGVGSSCLQIARAFGASDIIAVDVNDEKLENAKVFGASHTVNAL 292

Query: 362 KEDAVEKIKEITGGMGVDIAVEALGKPRTFLQCTQSVRDGGKAVMIGLAPTNVIGEVDIT 541
           KED  +KI+EITGG GVD+AVEALGKP TF QCTQSVRDGGKAVMIGL  +  +GE+DI 
Sbjct: 293 KEDVADKIREITGGRGVDVAVEALGKPLTFAQCTQSVRDGGKAVMIGLTKSGAVGEIDIN 352

Query: 542 RLVRRQ 559
           RLVRRQ
Sbjct: 353 RLVRRQ 358



 Score = 55.1 bits (131), Expect(2) = 6e-82
 Identities = 26/40 (65%), Positives = 30/40 (75%)
 Frame = +1

Query: 661 TGIFDFNSAISRKCTLEEVDKVFQDLASGSIVGRAVVEIM 780
           TGIF+  +A+SRKC  EEV K +QDL  G IV RAVVEIM
Sbjct: 382 TGIFNLKAAVSRKCEFEEVGKAYQDLDQGKIVSRAVVEIM 421


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