BLASTX nr result
ID: Coptis24_contig00016120
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00016120 (391 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002515696.1| Root phototropism protein, putative [Ricinus... 62 5e-08 ref|XP_002327917.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 ref|XP_004151925.1| PREDICTED: BTB/POZ domain-containing protein... 56 3e-06 ref|XP_002305638.1| predicted protein [Populus trichocarpa] gi|2... 55 4e-06 >ref|XP_002515696.1| Root phototropism protein, putative [Ricinus communis] gi|223545133|gb|EEF46643.1| Root phototropism protein, putative [Ricinus communis] Length = 542 Score = 62.0 bits (149), Expect = 5e-08 Identities = 28/41 (68%), Positives = 36/41 (87%) Frame = +3 Query: 267 LEVDVNGQEVFFVNKRTLTSFSGKLSKLFGKSTGSRKNLKV 389 LEVDVNG+E F V+K+ ++S+SG+LSKLFGKSTGS +N KV Sbjct: 7 LEVDVNGEETFVVDKKLISSYSGRLSKLFGKSTGSSRNFKV 47 >ref|XP_002327917.1| predicted protein [Populus trichocarpa] gi|222837326|gb|EEE75705.1| predicted protein [Populus trichocarpa] Length = 515 Score = 56.6 bits (135), Expect = 2e-06 Identities = 26/41 (63%), Positives = 33/41 (80%) Frame = +3 Query: 267 LEVDVNGQEVFFVNKRTLTSFSGKLSKLFGKSTGSRKNLKV 389 LEVDVNG+E F V+K+ + S+ G+LSKL GK TGS +NLKV Sbjct: 7 LEVDVNGEETFMVDKKIIASYCGRLSKLSGKPTGSARNLKV 47 >ref|XP_004151925.1| PREDICTED: BTB/POZ domain-containing protein At3g22104-like [Cucumis sativus] Length = 521 Score = 55.8 bits (133), Expect = 3e-06 Identities = 24/41 (58%), Positives = 35/41 (85%) Frame = +3 Query: 267 LEVDVNGQEVFFVNKRTLTSFSGKLSKLFGKSTGSRKNLKV 389 LEVDVNG+++F V+K+ + S+SG+LSKLFGKS + +NLK+ Sbjct: 7 LEVDVNGEKIFMVDKKIVASYSGRLSKLFGKSKSTSRNLKL 47 >ref|XP_002305638.1| predicted protein [Populus trichocarpa] gi|222848602|gb|EEE86149.1| predicted protein [Populus trichocarpa] Length = 495 Score = 55.5 bits (132), Expect = 4e-06 Identities = 26/41 (63%), Positives = 33/41 (80%) Frame = +3 Query: 267 LEVDVNGQEVFFVNKRTLTSFSGKLSKLFGKSTGSRKNLKV 389 LEVDVNG+E+F V+K+TL+SFS +LSKLFG T + LKV Sbjct: 7 LEVDVNGEEIFIVDKKTLSSFSDRLSKLFGDLTDGSRKLKV 47