BLASTX nr result

ID: Coptis24_contig00016120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016120
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515696.1| Root phototropism protein, putative [Ricinus...    62   5e-08
ref|XP_002327917.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_004151925.1| PREDICTED: BTB/POZ domain-containing protein...    56   3e-06
ref|XP_002305638.1| predicted protein [Populus trichocarpa] gi|2...    55   4e-06

>ref|XP_002515696.1| Root phototropism protein, putative [Ricinus communis]
           gi|223545133|gb|EEF46643.1| Root phototropism protein,
           putative [Ricinus communis]
          Length = 542

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/41 (68%), Positives = 36/41 (87%)
 Frame = +3

Query: 267 LEVDVNGQEVFFVNKRTLTSFSGKLSKLFGKSTGSRKNLKV 389
           LEVDVNG+E F V+K+ ++S+SG+LSKLFGKSTGS +N KV
Sbjct: 7   LEVDVNGEETFVVDKKLISSYSGRLSKLFGKSTGSSRNFKV 47


>ref|XP_002327917.1| predicted protein [Populus trichocarpa] gi|222837326|gb|EEE75705.1|
           predicted protein [Populus trichocarpa]
          Length = 515

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/41 (63%), Positives = 33/41 (80%)
 Frame = +3

Query: 267 LEVDVNGQEVFFVNKRTLTSFSGKLSKLFGKSTGSRKNLKV 389
           LEVDVNG+E F V+K+ + S+ G+LSKL GK TGS +NLKV
Sbjct: 7   LEVDVNGEETFMVDKKIIASYCGRLSKLSGKPTGSARNLKV 47


>ref|XP_004151925.1| PREDICTED: BTB/POZ domain-containing protein At3g22104-like
           [Cucumis sativus]
          Length = 521

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/41 (58%), Positives = 35/41 (85%)
 Frame = +3

Query: 267 LEVDVNGQEVFFVNKRTLTSFSGKLSKLFGKSTGSRKNLKV 389
           LEVDVNG+++F V+K+ + S+SG+LSKLFGKS  + +NLK+
Sbjct: 7   LEVDVNGEKIFMVDKKIVASYSGRLSKLFGKSKSTSRNLKL 47


>ref|XP_002305638.1| predicted protein [Populus trichocarpa] gi|222848602|gb|EEE86149.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 26/41 (63%), Positives = 33/41 (80%)
 Frame = +3

Query: 267 LEVDVNGQEVFFVNKRTLTSFSGKLSKLFGKSTGSRKNLKV 389
           LEVDVNG+E+F V+K+TL+SFS +LSKLFG  T   + LKV
Sbjct: 7   LEVDVNGEEIFIVDKKTLSSFSDRLSKLFGDLTDGSRKLKV 47


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