BLASTX nr result

ID: Coptis24_contig00016111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016111
         (1194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531882.1| hypothetical protein RCOM_1439870 [Ricinus c...   277   3e-72
ref|XP_002263866.1| PREDICTED: alkylated DNA repair protein alkB...   268   3e-69
ref|XP_002320350.1| predicted protein [Populus trichocarpa] gi|2...   263   6e-68
ref|XP_004152257.1| PREDICTED: alkylated DNA repair protein alkB...   260   4e-67
ref|XP_002451217.1| hypothetical protein SORBIDRAFT_05g025940 [S...   235   1e-59

>ref|XP_002531882.1| hypothetical protein RCOM_1439870 [Ricinus communis]
           gi|223528490|gb|EEF30519.1| hypothetical protein
           RCOM_1439870 [Ricinus communis]
          Length = 258

 Score =  277 bits (709), Expect = 3e-72
 Identities = 144/258 (55%), Positives = 174/258 (67%), Gaps = 16/258 (6%)
 Frame = +1

Query: 58  EENRSILKDVFGXXXXXXXXXXI----------------NNKWEEVKEIKGLWLSRDXXX 189
           E+ ++ILK+VFG          I                N  WE + +I GLWL R+   
Sbjct: 2   EDEKTILKEVFGESSESEAEESIVFSSLHDDGSHSTTDQNPTWEPIHQINGLWLCRNFLS 61

Query: 190 XXXXXXXXXXIQNEGWFTEASQNQAMRFGDLPVWATELSHSICEAVIYAGNVSFSGDPET 369
                     IQNEGWFTE+S NQAMRFGDLP WA +LSHSI E V++   +S S +  +
Sbjct: 62  SHQQSTLLSHIQNEGWFTESSNNQAMRFGDLPSWAIQLSHSIREVVLFGDQISQSPNLGS 121

Query: 370 FDLNEEEVCPMPSNLVFREPLFDQLIVNVYQPGEGICAHVDLMRFEDGIAIVSLESSCVM 549
            D  E     +PSNL++REPLFDQLIVNVYQPGEGICAHVDLMRFEDGIAIVSLESSCVM
Sbjct: 122 CD-EENGSTLLPSNLLWREPLFDQLIVNVYQPGEGICAHVDLMRFEDGIAIVSLESSCVM 180

Query: 550 HFTRVETKASSIEIGEKKESVLKTPILLTPGSLILMFGEARYLWKHEINRNAGFQMWGGQ 729
           HFT+V     + E GEK + +   P+ LTPGSL+L++G+ARYLWKHEINR  GFQMW GQ
Sbjct: 181 HFTQVRA-VDANEKGEKDQDMTSIPVYLTPGSLVLLWGDARYLWKHEINRKPGFQMWEGQ 239

Query: 730 EIHQQKRTSVTLRRLCPS 783
           E+ Q++RTS+TLR LCPS
Sbjct: 240 ELSQKRRTSITLRMLCPS 257


>ref|XP_002263866.1| PREDICTED: alkylated DNA repair protein alkB homolog 8 [Vitis
           vinifera] gi|297743861|emb|CBI36831.3| unnamed protein
           product [Vitis vinifera]
          Length = 260

 Score =  268 bits (684), Expect = 3e-69
 Identities = 142/261 (54%), Positives = 172/261 (65%), Gaps = 16/261 (6%)
 Frame = +1

Query: 52  MEEENRSILKDVFGXXXXXXXXXXI--------------NNKWEEVKEIKGLWLSRDXXX 189
           MEE+ +++L+ VFG                         N  WE + EI GLWL RD   
Sbjct: 1   MEEKQKTLLEAVFGESSDSEDSDHHPQNRLEDSSIHSEKNPSWEPISEINGLWLCRDFLS 60

Query: 190 XXXXXXXXXXIQNEGWFTEASQNQAMRFGDLPVWATELSHSICEAVIYAGNVSFSGDPET 369
                     I+ EGWF+EAS NQAMRFG+LP WATELSHSI E V+++  VS   D  T
Sbjct: 61  PQEQSSLLSAIEKEGWFSEASHNQAMRFGNLPEWATELSHSIREVVLFSDYVSEHMDSVT 120

Query: 370 FDLNEEEVCPMPSNLVFREPLFDQLIVNVYQPGEGICAHVDLMRFEDGIAIVSLESSCVM 549
            D  +E+ C +PS +++REPLFDQLI+NVYQPGEGIC HVDLMRFEDGIAI+SLESSC+M
Sbjct: 121 CD-GDEKGCLLPSEILWREPLFDQLILNVYQPGEGICPHVDLMRFEDGIAIISLESSCIM 179

Query: 550 HFTRV-ETKA-SSIEIGEKKESVLKTPILLTPGSLILMFGEARYLWKHEINRNAGFQMWG 723
           HFT V +T+A  S   G     + K P+ LTPGSL+LM GEARY WKHEINR  GFQ+W 
Sbjct: 180 HFTHVDDTEACDSGREGRNYSPMTKIPVYLTPGSLVLMSGEARYFWKHEINRKPGFQIWE 239

Query: 724 GQEIHQQKRTSVTLRRLCPSE 786
           GQEI Q+ RTS+TLR+LC  E
Sbjct: 240 GQEIDQKSRTSITLRKLCKIE 260


>ref|XP_002320350.1| predicted protein [Populus trichocarpa] gi|222861123|gb|EEE98665.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score =  263 bits (672), Expect = 6e-68
 Identities = 132/217 (60%), Positives = 156/217 (71%)
 Frame = +1

Query: 136 WEEVKEIKGLWLSRDXXXXXXXXXXXXXIQNEGWFTEASQNQAMRFGDLPVWATELSHSI 315
           WE +KEIKGLWL R              IQNEGWF EAS NQAMRFGDLP WA ELS+SI
Sbjct: 42  WEPIKEIKGLWLCRHFLSPHQQSTFLSAIQNEGWFLEASNNQAMRFGDLPSWAIELSNSI 101

Query: 316 CEAVIYAGNVSFSGDPETFDLNEEEVCPMPSNLVFREPLFDQLIVNVYQPGEGICAHVDL 495
            E V+Y   +         D  E   C +P +L+ REP FDQLIVNVYQPGEGICAHVDL
Sbjct: 102 REVVLYGDRIHEPPSCAGSDRGEA-ACWLPPDLLSREPFFDQLIVNVYQPGEGICAHVDL 160

Query: 496 MRFEDGIAIVSLESSCVMHFTRVETKASSIEIGEKKESVLKTPILLTPGSLILMFGEARY 675
           MRFEDGIAIVSLESSCVMHFT+V  + S  +  +    ++K P+ L PGSL+L+FG+ARY
Sbjct: 161 MRFEDGIAIVSLESSCVMHFTQV-GEVSDCDKEQPDLPMIKIPVFLMPGSLVLLFGDARY 219

Query: 676 LWKHEINRNAGFQMWGGQEIHQQKRTSVTLRRLCPSE 786
           LWKHEINR  GFQMW GQE++Q++RTS+TLR+LC +E
Sbjct: 220 LWKHEINRKPGFQMWEGQEVNQKRRTSITLRKLCHAE 256


>ref|XP_004152257.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like
           [Cucumis sativus] gi|449484295|ref|XP_004156842.1|
           PREDICTED: alkylated DNA repair protein alkB homolog
           8-like [Cucumis sativus]
          Length = 260

 Score =  260 bits (665), Expect = 4e-67
 Identities = 127/220 (57%), Positives = 165/220 (75%), Gaps = 1/220 (0%)
 Frame = +1

Query: 130 NKWEEVKEIKGLWLSRDXXXXXXXXXXXXXIQNEGWFTEASQNQAMRFGDLPVWATELSH 309
           +KWE+VK+IKGLWL R              I+NEGWF EASQNQAMRFG+LP WA ELS 
Sbjct: 42  HKWEQVKQIKGLWLCRFFLSPQQQSSLLSAIRNEGWFMEASQNQAMRFGNLPTWAVELSD 101

Query: 310 SICEAVIYAGNVSFSGDPETFDLNEEEVCPMPSNLVFREPLFDQLIVNVYQPGEGICAHV 489
           S+ EAV+ + +++ +   + ++ ++ + CP+PS++++REPLFDQ+I NVYQPGEGICAHV
Sbjct: 102 SVYEAVLSSNHMTDTLIVDRYNGDKID-CPLPSDILWREPLFDQMIANVYQPGEGICAHV 160

Query: 490 DLMRFEDGIAIVSLESSCVMHFTRVETKASSIEI-GEKKESVLKTPILLTPGSLILMFGE 666
           DLMRFEDGIAIVSLES C+MHFT+V+  +    I GE   S  K P+ L PGSL++++GE
Sbjct: 161 DLMRFEDGIAIVSLESPCIMHFTQVDKTSCDPSIKGEVNLSTSKVPVYLNPGSLVILWGE 220

Query: 667 ARYLWKHEINRNAGFQMWGGQEIHQQKRTSVTLRRLCPSE 786
           ARY WKHEINR  GFQ+W GQE+ Q +RTS+TLR+LC  E
Sbjct: 221 ARYHWKHEINRKPGFQIWEGQELAQGRRTSITLRKLCHVE 260


>ref|XP_002451217.1| hypothetical protein SORBIDRAFT_05g025940 [Sorghum bicolor]
           gi|241937060|gb|EES10205.1| hypothetical protein
           SORBIDRAFT_05g025940 [Sorghum bicolor]
          Length = 262

 Score =  235 bits (600), Expect = 1e-59
 Identities = 123/220 (55%), Positives = 154/220 (70%), Gaps = 3/220 (1%)
 Frame = +1

Query: 133 KWEEVKEIKGLWLSRDXXXXXXXXXXXXXIQNEGWFTEASQNQAMRFGDLPVWATELSHS 312
           +WE V  ++GLWL                IQ EGWF +A+ NQAMRFGDLP WA ELS  
Sbjct: 44  RWEPVAGVRGLWLCAAFLSADEQARLLSAIQREGWFVDAN-NQAMRFGDLPSWAVELSAL 102

Query: 313 ICEAVIYAGNVSFSGDPETFDLNEEEVCPMPSNLVFREPLFDQLIVNVYQPGEGICAHVD 492
           I EA+   G+ S   D E  +  +E+ CP+PS+L++REP FDQ+I N Y+PGEGICAHVD
Sbjct: 103 IREAIC-VGDASVGLDAEVTN-EDEDACPLPSDLLWREPFFDQMIANRYKPGEGICAHVD 160

Query: 493 LMRFEDGIAIVSLESSCVMHFTRVE-TKASSIEIGEKKESV--LKTPILLTPGSLILMFG 663
           LMRF+DGIAIVSLES+CVMHF++ E T+ S+     K+  V   K P+LL PGSL+LM G
Sbjct: 161 LMRFDDGIAIVSLESACVMHFSQAEPTRGSAASDILKQGDVESTKVPVLLKPGSLVLMSG 220

Query: 664 EARYLWKHEINRNAGFQMWGGQEIHQQKRTSVTLRRLCPS 783
           +ARYLWKHEINR  G Q+W G+E+ Q +RTSVTLR+L PS
Sbjct: 221 DARYLWKHEINRKPGRQLWDGRELEQHRRTSVTLRKLLPS 260


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