BLASTX nr result

ID: Coptis24_contig00016096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016096
         (1518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27884.3| unnamed protein product [Vitis vinifera]              322   e-125
ref|XP_004144008.1| PREDICTED: WD repeat-containing protein DWA1...   317   e-123
ref|XP_002281247.2| PREDICTED: eukaryotic initiation factor 4A-1...   313   e-122
ref|XP_003550627.1| PREDICTED: uncharacterized protein LOC100806...   309   e-119
gb|ACU18349.1| unknown [Glycine max]                                  305   e-118

>emb|CBI27884.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score =  322 bits (824), Expect(2) = e-125
 Identities = 162/268 (60%), Positives = 193/268 (72%), Gaps = 12/268 (4%)
 Frame = -3

Query: 1453 DARKWDEEEYKSSILKERELQSLTVFRTVFAPCQNLNTPEIIVAASSDGXXXXXXXXXXX 1274
            DAR WDE+ Y++SILKERE+Q+ TVFR +FAP QN N P++IV ASSDG           
Sbjct: 4    DARDWDEDGYRNSILKEREIQTRTVFRAIFAPSQNPN-PDVIVVASSDGTLASYSISSCI 62

Query: 1273 XXXXXXS---------GYLVAEPICLLRGHDGPAYDVKFYXXXXXXXXXXXG---RIQGW 1130
                            G  VAEP C L+GHDGPAYDVKFY           G   RI+GW
Sbjct: 63   SQLSGFGNARPRKSLLGLPVAEPNCFLQGHDGPAYDVKFYGDGEESLLLSCGDDGRIRGW 122

Query: 1129 KWNQLLDSEIPISTMQGKDMEPILNLVNPQHKGPWGALSPIPENNAIAIDSQGGSIFSAA 950
            +W ++  SE+ I  +QG  +EP+L+LVNPQHKGPWGALSP+PENNAIA+++Q GS+F+AA
Sbjct: 123  RWKEITQSEVHIP-LQGNHVEPVLDLVNPQHKGPWGALSPVPENNAIAVNAQWGSVFAAA 181

Query: 949  GDSFAYCWDVETTKIKMVFKGHSDYLHCIAARNSSNQIITGSEDGTVRTWDCKSGKCVHV 770
            GDS AYCWDVE +KIKMVFKGHSDYLHCI ARNSSNQIITGSEDGT R WDC+SGKC+ V
Sbjct: 182  GDSCAYCWDVEKSKIKMVFKGHSDYLHCIIARNSSNQIITGSEDGTARIWDCQSGKCIQV 241

Query: 769  IDPAKNTELKGTFSWISCIALDASETWL 686
            ID  K+ + K  FS +SCIALDASE+WL
Sbjct: 242  IDAKKDKKPKEIFSCVSCIALDASESWL 269



 Score =  155 bits (391), Expect(2) = e-125
 Identities = 76/105 (72%), Positives = 87/105 (82%)
 Frame = -1

Query: 606 AFSSGKTLSIWNLPASEPVTRVVTGYPIQDLLFDENQILAVGAEPVLSRFDMNGTTLSQI 427
           A+  G++LS+WNLPA E VTRV T    QD++FD+NQILAVGAEP+LSRFD+NG  LSQI
Sbjct: 270 AYGRGRSLSVWNLPACERVTRVSTHASFQDIVFDDNQILAVGAEPLLSRFDINGVILSQI 329

Query: 426 NCAPQSGFSVSLHSCGVTAVGGYGGLVDIISQFGSHLCTFCCRGR 292
            CAPQS FSVSLH  GVTAV GYGG+VD+ISQFGSHLCTF  RGR
Sbjct: 330 QCAPQSAFSVSLHPSGVTAVAGYGGVVDVISQFGSHLCTF--RGR 372


>ref|XP_004144008.1| PREDICTED: WD repeat-containing protein DWA1-like [Cucumis sativus]
            gi|449489893|ref|XP_004158451.1| PREDICTED: WD
            repeat-containing protein DWA1-like [Cucumis sativus]
          Length = 369

 Score =  317 bits (813), Expect(2) = e-123
 Identities = 159/263 (60%), Positives = 186/263 (70%), Gaps = 7/263 (2%)
 Frame = -3

Query: 1453 DARKWDEEEYKSSILKERELQSLTVFRTVFAPCQNLNTPEIIVAASSDGXXXXXXXXXXX 1274
            DA  WDE  Y+ SI KERE+Q+ TVFRT +AP  N   PE IVAASSDG           
Sbjct: 4    DATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLN-GCPETIVAASSDGSVASYSIASCI 62

Query: 1273 XXXXXXSG----YLVAEPICLLRGHDGPAYDVKFYXXXXXXXXXXXG---RIQGWKWNQL 1115
                   G     L AEP C L+GHDGP YDVKFY           G    I+GW+W   
Sbjct: 63   SKLQFGYGNTKSLLAAEPNCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWRDC 122

Query: 1114 LDSEIPISTMQGKDMEPILNLVNPQHKGPWGALSPIPENNAIAIDSQGGSIFSAAGDSFA 935
             D ++PIS +QG  +EP+++L+NPQ KGPWGALSPIPENNAIA D+Q GSIFSAAGDS A
Sbjct: 123  TDIKVPIS-LQGSHIEPVMDLINPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSCA 181

Query: 934  YCWDVETTKIKMVFKGHSDYLHCIAARNSSNQIITGSEDGTVRTWDCKSGKCVHVIDPAK 755
            YCWD+E+ K+KMVFKGHSDYLHCI ARN+ NQIITGSEDGT R WDCKSGKC+ +IDPAK
Sbjct: 182  YCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPAK 241

Query: 754  NTELKGTFSWISCIALDASETWL 686
            + +LKG FS++ CIALDASE+WL
Sbjct: 242  DKKLKGHFSFVRCIALDASESWL 264



 Score =  151 bits (382), Expect(2) = e-123
 Identities = 68/105 (64%), Positives = 88/105 (83%)
 Frame = -1

Query: 606 AFSSGKTLSIWNLPASEPVTRVVTGYPIQDLLFDENQILAVGAEPVLSRFDMNGTTLSQI 427
           A + G+++S+WNLP+SE +++ +T   +QD++F +NQIL VGAEP L+RFD+NG+ LSQI
Sbjct: 265 ACADGRSISVWNLPSSEFISKTLTRSSLQDMVFCDNQILGVGAEPFLTRFDINGSVLSQI 324

Query: 426 NCAPQSGFSVSLHSCGVTAVGGYGGLVDIISQFGSHLCTFCCRGR 292
            CAPQS FSV+LH  GV AVGGYGGLVD+ISQFGSHLCTFCC+ R
Sbjct: 325 QCAPQSAFSVALHPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 369


>ref|XP_002281247.2| PREDICTED: eukaryotic initiation factor 4A-15-like [Vitis vinifera]
          Length = 803

 Score =  313 bits (803), Expect(2) = e-122
 Identities = 159/269 (59%), Positives = 189/269 (70%), Gaps = 13/269 (4%)
 Frame = -3

Query: 1453 DARKWDEEEYKSSILKERELQSLTVFRTVFAPCQNLNTPEIIVAASSDGXXXXXXXXXXX 1274
            DAR WDE+ Y++SILKERE+Q+ TVFR +FAP QN N P++IV ASSDG           
Sbjct: 4    DARDWDEDGYRNSILKEREIQTRTVFRAIFAPSQNPN-PDVIVVASSDGTLASYSISSCI 62

Query: 1273 XXXXXXSGYL----------VAEPICLLRGHDGPAYDVKFYXXXXXXXXXXXG---RIQG 1133
                   G            VAEP C L+GHDGPAYDVKFY           G   RI+G
Sbjct: 63   SQLQSGFGNARPRKSLLGLPVAEPNCFLQGHDGPAYDVKFYGDGEESLLLSCGDDGRIRG 122

Query: 1132 WKWNQLLDSEIPISTMQGKDMEPILNLVNPQHKGPWGALSPIPENNAIAIDSQGGSIFSA 953
            W+W ++  SE+         +EP+L+LVNPQHKGPWGALSP+PENNAIA+++Q GS+F+A
Sbjct: 123  WRWKEITQSEV-------HHVEPVLDLVNPQHKGPWGALSPVPENNAIAVNAQWGSVFAA 175

Query: 952  AGDSFAYCWDVETTKIKMVFKGHSDYLHCIAARNSSNQIITGSEDGTVRTWDCKSGKCVH 773
            AGDS AYCWDVE +KIKMVFKGHSDYLHCI ARNSSNQIITGSEDGT R WDC+SGKC+ 
Sbjct: 176  AGDSCAYCWDVEKSKIKMVFKGHSDYLHCIIARNSSNQIITGSEDGTARIWDCQSGKCIQ 235

Query: 772  VIDPAKNTELKGTFSWISCIALDASETWL 686
            VID  K+ + K  FS +SCIALDASE+WL
Sbjct: 236  VIDAKKDKKPKEIFSCVSCIALDASESWL 264



 Score =  154 bits (388), Expect(2) = e-122
 Identities = 73/100 (73%), Positives = 84/100 (84%)
 Frame = -1

Query: 606 AFSSGKTLSIWNLPASEPVTRVVTGYPIQDLLFDENQILAVGAEPVLSRFDMNGTTLSQI 427
           A+  G++LS+WNLPA E VTRV T    QD++FD+NQILAVGAEP+LSRFD+NG  LSQI
Sbjct: 265 AYGRGRSLSVWNLPACERVTRVSTHASFQDIVFDDNQILAVGAEPLLSRFDINGVILSQI 324

Query: 426 NCAPQSGFSVSLHSCGVTAVGGYGGLVDIISQFGSHLCTF 307
            CAPQS FSVSLH  GVTAV GYGG+VD+ISQFGSHLCTF
Sbjct: 325 QCAPQSAFSVSLHPSGVTAVAGYGGVVDVISQFGSHLCTF 364


>ref|XP_003550627.1| PREDICTED: uncharacterized protein LOC100806423 [Glycine max]
          Length = 863

 Score =  309 bits (791), Expect(2) = e-119
 Identities = 151/268 (56%), Positives = 190/268 (70%), Gaps = 12/268 (4%)
 Frame = -3

Query: 1453 DARKWDEEEYKSSILKERELQSLTVFRTVFAPCQNLNTPEIIVAASSDGXXXXXXXXXXX 1274
            DA  WDE+ Y+ +ILKERE+Q+ TVFRT +AP    N   +I+A SSDG           
Sbjct: 4    DATNWDEDAYRETILKEREIQTRTVFRTAWAPPYTSNLDTLILA-SSDGSVASYSISSSI 62

Query: 1273 XXXXXXSGY---------LVAEPICLLRGHDGPAYDVKFYXXXXXXXXXXXG---RIQGW 1130
                  + +         L+AEP C ++ HDGPAYDV+FY           G   RI+GW
Sbjct: 63   AASKIKNPFGFVNADTDELLAEPNCFVQAHDGPAYDVRFYGDGEDALLLSCGDDGRIRGW 122

Query: 1129 KWNQLLDSEIPISTMQGKDMEPILNLVNPQHKGPWGALSPIPENNAIAIDSQGGSIFSAA 950
            +WN+   S   +S+ QG D++P+L++VNPQHKGPWGALSPIPENNAIA+++QGGS+F+A+
Sbjct: 123  RWNEFSSSNYSVSS-QGNDIKPVLDVVNPQHKGPWGALSPIPENNAIAVNTQGGSVFAAS 181

Query: 949  GDSFAYCWDVETTKIKMVFKGHSDYLHCIAARNSSNQIITGSEDGTVRTWDCKSGKCVHV 770
            GDS AYCWDVET K+KMVFKGH DYLHCI ARNS +QIITGSEDGT R WDCKSGKC  V
Sbjct: 182  GDSCAYCWDVETGKVKMVFKGHMDYLHCIVARNSLDQIITGSEDGTTRIWDCKSGKCTQV 241

Query: 769  IDPAKNTELKGTFSWISCIALDASETWL 686
            IDPA++ +LKG+ SW+ C+ALDASE+WL
Sbjct: 242  IDPARDLKLKGSASWVGCVALDASESWL 269



 Score =  148 bits (374), Expect(2) = e-119
 Identities = 68/103 (66%), Positives = 84/103 (81%)
 Frame = -1

Query: 606 AFSSGKTLSIWNLPASEPVTRVVTGYPIQDLLFDENQILAVGAEPVLSRFDMNGTTLSQI 427
           A SSG+ +S+WNLPASE ++++ T   +QD+LFD NQIL VG +P+L+RFDMNGT LSQI
Sbjct: 270 ACSSGRNISLWNLPASECISKIPTRACVQDMLFDNNQILTVGTDPLLNRFDMNGTILSQI 329

Query: 426 NCAPQSGFSVSLHSCGVTAVGGYGGLVDIISQFGSHLCTFCCR 298
            CAP S FS+SLH  GV AVGGYG LVD+ISQFGSH+CTF C+
Sbjct: 330 QCAPSSSFSISLHPAGVMAVGGYGCLVDVISQFGSHMCTFHCQ 372


>gb|ACU18349.1| unknown [Glycine max]
          Length = 374

 Score =  305 bits (781), Expect(2) = e-118
 Identities = 148/268 (55%), Positives = 188/268 (70%), Gaps = 12/268 (4%)
 Frame = -3

Query: 1453 DARKWDEEEYKSSILKERELQSLTVFRTVFAPCQNLNTPEIIVAASSDGXXXXXXXXXXX 1274
            DA  WDE+ Y+ ++L+ERE+Q+ TVFRT +AP    N   ++VA SSDG           
Sbjct: 4    DATNWDEDAYRETVLREREIQTRTVFRTAWAPPYTSNLDTLLVA-SSDGSVASYSISSSV 62

Query: 1273 XXXXXXSGY---------LVAEPICLLRGHDGPAYDVKFYXXXXXXXXXXXG---RIQGW 1130
                  + +         L+AEP C ++ H GPAYDVKFY           G   +I+GW
Sbjct: 63   VASKLKNPFGFVNADTDELLAEPNCFVQAHAGPAYDVKFYGDGEDALLLSCGDDGQIRGW 122

Query: 1129 KWNQLLDSEIPISTMQGKDMEPILNLVNPQHKGPWGALSPIPENNAIAIDSQGGSIFSAA 950
            +W +   S   +S  QG D++P+L++VNPQHKGPWGALSP+PENNAIA+++QGGS+F+A+
Sbjct: 123  RWKEFSSSNYSVSP-QGNDIKPVLDVVNPQHKGPWGALSPVPENNAIAVNTQGGSVFAAS 181

Query: 949  GDSFAYCWDVETTKIKMVFKGHSDYLHCIAARNSSNQIITGSEDGTVRTWDCKSGKCVHV 770
            GDS AYCWDVET K+KMVFKGH DYLHCI ARNSSNQIITGSEDGT R WDCKSGKC  V
Sbjct: 182  GDSCAYCWDVETGKVKMVFKGHMDYLHCIVARNSSNQIITGSEDGTTRIWDCKSGKCTQV 241

Query: 769  IDPAKNTELKGTFSWISCIALDASETWL 686
            IDPA++ +LKG+ SW+ C+ALDASE+WL
Sbjct: 242  IDPARDLKLKGSASWVGCVALDASESWL 269



 Score =  149 bits (375), Expect(2) = e-118
 Identities = 69/103 (66%), Positives = 84/103 (81%)
 Frame = -1

Query: 606 AFSSGKTLSIWNLPASEPVTRVVTGYPIQDLLFDENQILAVGAEPVLSRFDMNGTTLSQI 427
           A SSG+ +S+WNLPASE V+++ T   +QD+ FD NQIL VG +P+L+RFDMNGTTLSQI
Sbjct: 270 ACSSGRNISLWNLPASECVSKIPTRACVQDMSFDNNQILTVGTDPLLNRFDMNGTTLSQI 329

Query: 426 NCAPQSGFSVSLHSCGVTAVGGYGGLVDIISQFGSHLCTFCCR 298
            CAP S FS+SLH  GV AVGGYG LVD+ISQFGSH+CTF C+
Sbjct: 330 QCAPSSSFSISLHPAGVMAVGGYGCLVDVISQFGSHMCTFRCQ 372


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