BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016085
         (846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-a...   452   e-125
emb|CBI17093.3| unnamed protein product [Vitis vinifera]              452   e-125
ref|XP_002270098.1| PREDICTED: putative SWI/SNF-related matrix-a...   452   e-125
ref|XP_002527439.1| DNA repair helicase rad5,16, putative [Ricin...   438   e-121
gb|AAS79594.1| putative DNA repair protein [Ipomoea trifida] gi|...   430   e-118

>ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 2-like
            [Vitis vinifera]
          Length = 1029

 Score =  452 bits (1164), Expect = e-125
 Identities = 221/285 (77%), Positives = 249/285 (87%), Gaps = 4/285 (1%)
 Frame = +2

Query: 2    PPRTLQCELRPYQKQALHWMVQLEKGRCLEEAATTLHPCWDAYRLADKRELVIFLNVFSG 181
            PP TLQCELRPYQ+QALHWM+QLEKG C++EA TTLHPCWDAYRLADKRELVI+LN F+G
Sbjct: 339  PPSTLQCELRPYQRQALHWMIQLEKGPCMDEAGTTLHPCWDAYRLADKRELVIYLNAFTG 398

Query: 182  DATTEFPSTLQMSRGGILADAMGLGKTIMTIALLLSHSERG----GSSGIQASEEATEIN 349
            DATTEFPSTL+M+RGGILADAMGLGKTIMTIALLL+HSE+G      S  Q   E++EI+
Sbjct: 399  DATTEFPSTLKMARGGILADAMGLGKTIMTIALLLAHSEKGLLASSQSTSQHYHESSEIS 458

Query: 350  SMSEQSPTPSKKMTKHSGFDKLLKPRTSLIGGGNLIVCPMTLLGQWKAEIETHGEPGSLS 529
            S+S+QSP  SKK  K SGF KL K   +L  GGNLI+CPMTLLGQWKAEIETH +PGSLS
Sbjct: 459  SISDQSPDLSKKAAKFSGFHKLKKQENTLTSGGNLIICPMTLLGQWKAEIETHAQPGSLS 518

Query: 530  IYVHYGHSRPKDAKLLAQNDVVLTTYGVLTSEYSTENAEEGGGLHSVRWFRVVLDEAHTI 709
            +YVHYG  R KDAK+LAQNDVV+TTYGVL SE+S E+AE+ GGL+SV WFRVVLDEAHTI
Sbjct: 519  VYVHYGQGRLKDAKILAQNDVVITTYGVLASEFSPEHAEDNGGLYSVHWFRVVLDEAHTI 578

Query: 710  KNSKSQISVATSALIADRRWCLTGTPIQNNLEDIYSLLRFLRVEP 844
            K+SKSQIS+A +ALIADRRWCLTGTPIQNNLEDIYSLLRFLRVEP
Sbjct: 579  KSSKSQISMAAAALIADRRWCLTGTPIQNNLEDIYSLLRFLRVEP 623


>emb|CBI17093.3| unnamed protein product [Vitis vinifera]
          Length = 1025

 Score =  452 bits (1164), Expect = e-125
 Identities = 221/285 (77%), Positives = 249/285 (87%), Gaps = 4/285 (1%)
 Frame = +2

Query: 2    PPRTLQCELRPYQKQALHWMVQLEKGRCLEEAATTLHPCWDAYRLADKRELVIFLNVFSG 181
            PP TLQCELRPYQ+QALHWM+QLEKG C++EA TTLHPCWDAYRLADKRELVI+LN F+G
Sbjct: 335  PPSTLQCELRPYQRQALHWMIQLEKGPCMDEAGTTLHPCWDAYRLADKRELVIYLNAFTG 394

Query: 182  DATTEFPSTLQMSRGGILADAMGLGKTIMTIALLLSHSERG----GSSGIQASEEATEIN 349
            DATTEFPSTL+M+RGGILADAMGLGKTIMTIALLL+HSE+G      S  Q   E++EI+
Sbjct: 395  DATTEFPSTLKMARGGILADAMGLGKTIMTIALLLAHSEKGLLASSQSTSQHYHESSEIS 454

Query: 350  SMSEQSPTPSKKMTKHSGFDKLLKPRTSLIGGGNLIVCPMTLLGQWKAEIETHGEPGSLS 529
            S+S+QSP  SKK  K SGF KL K   +L  GGNLI+CPMTLLGQWKAEIETH +PGSLS
Sbjct: 455  SISDQSPDLSKKAAKFSGFHKLKKQENTLTSGGNLIICPMTLLGQWKAEIETHAQPGSLS 514

Query: 530  IYVHYGHSRPKDAKLLAQNDVVLTTYGVLTSEYSTENAEEGGGLHSVRWFRVVLDEAHTI 709
            +YVHYG  R KDAK+LAQNDVV+TTYGVL SE+S E+AE+ GGL+SV WFRVVLDEAHTI
Sbjct: 515  VYVHYGQGRLKDAKILAQNDVVITTYGVLASEFSPEHAEDNGGLYSVHWFRVVLDEAHTI 574

Query: 710  KNSKSQISVATSALIADRRWCLTGTPIQNNLEDIYSLLRFLRVEP 844
            K+SKSQIS+A +ALIADRRWCLTGTPIQNNLEDIYSLLRFLRVEP
Sbjct: 575  KSSKSQISMAAAALIADRRWCLTGTPIQNNLEDIYSLLRFLRVEP 619


>ref|XP_002270098.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 2-like
            isoform 2 [Vitis vinifera]
          Length = 1016

 Score =  452 bits (1164), Expect = e-125
 Identities = 221/285 (77%), Positives = 249/285 (87%), Gaps = 4/285 (1%)
 Frame = +2

Query: 2    PPRTLQCELRPYQKQALHWMVQLEKGRCLEEAATTLHPCWDAYRLADKRELVIFLNVFSG 181
            PP TLQCELRPYQ+QALHWM+QLEKG C++EA TTLHPCWDAYRLADKRELVI+LN F+G
Sbjct: 326  PPSTLQCELRPYQRQALHWMIQLEKGPCMDEAGTTLHPCWDAYRLADKRELVIYLNAFTG 385

Query: 182  DATTEFPSTLQMSRGGILADAMGLGKTIMTIALLLSHSERG----GSSGIQASEEATEIN 349
            DATTEFPSTL+M+RGGILADAMGLGKTIMTIALLL+HSE+G      S  Q   E++EI+
Sbjct: 386  DATTEFPSTLKMARGGILADAMGLGKTIMTIALLLAHSEKGLLASSQSTSQHYHESSEIS 445

Query: 350  SMSEQSPTPSKKMTKHSGFDKLLKPRTSLIGGGNLIVCPMTLLGQWKAEIETHGEPGSLS 529
            S+S+QSP  SKK  K SGF KL K   +L  GGNLI+CPMTLLGQWKAEIETH +PGSLS
Sbjct: 446  SISDQSPDLSKKAAKFSGFHKLKKQENTLTSGGNLIICPMTLLGQWKAEIETHAQPGSLS 505

Query: 530  IYVHYGHSRPKDAKLLAQNDVVLTTYGVLTSEYSTENAEEGGGLHSVRWFRVVLDEAHTI 709
            +YVHYG  R KDAK+LAQNDVV+TTYGVL SE+S E+AE+ GGL+SV WFRVVLDEAHTI
Sbjct: 506  VYVHYGQGRLKDAKILAQNDVVITTYGVLASEFSPEHAEDNGGLYSVHWFRVVLDEAHTI 565

Query: 710  KNSKSQISVATSALIADRRWCLTGTPIQNNLEDIYSLLRFLRVEP 844
            K+SKSQIS+A +ALIADRRWCLTGTPIQNNLEDIYSLLRFLRVEP
Sbjct: 566  KSSKSQISMAAAALIADRRWCLTGTPIQNNLEDIYSLLRFLRVEP 610


>ref|XP_002527439.1| DNA repair helicase rad5,16, putative [Ricinus communis]
            gi|223533174|gb|EEF34931.1| DNA repair helicase rad5,16,
            putative [Ricinus communis]
          Length = 1028

 Score =  438 bits (1126), Expect = e-121
 Identities = 208/285 (72%), Positives = 245/285 (85%), Gaps = 4/285 (1%)
 Frame = +2

Query: 2    PPRTLQCELRPYQKQALHWMVQLEKGRCLEEAATTLHPCWDAYRLADKRELVIFLNVFSG 181
            PP TLQCELRPYQKQAL WM QLEKG+  +E AT LHPCW+AY LAD+R+LV++LN FSG
Sbjct: 338  PPSTLQCELRPYQKQALQWMYQLEKGKYTDEGATALHPCWEAYHLADQRQLVVYLNTFSG 397

Query: 182  DATTEFPSTLQMSRGGILADAMGLGKTIMTIALLLSHSERGGSSGIQ----ASEEATEIN 349
            DAT EFPSTLQM+RGGILAD+MGLGKTIMTI+LLL+HSERGG+S  Q     S E +++N
Sbjct: 398  DATVEFPSTLQMARGGILADSMGLGKTIMTISLLLAHSERGGTSSTQFMSQLSTENSDVN 457

Query: 350  SMSEQSPTPSKKMTKHSGFDKLLKPRTSLIGGGNLIVCPMTLLGQWKAEIETHGEPGSLS 529
              S+Q P P K   + SGFDKL+K +  L+ GGNL++CPMTLLGQWKAEIETH +PGSLS
Sbjct: 458  DTSDQLPNPPKNTKRFSGFDKLMKQKKILVNGGNLLICPMTLLGQWKAEIETHTQPGSLS 517

Query: 530  IYVHYGHSRPKDAKLLAQNDVVLTTYGVLTSEYSTENAEEGGGLHSVRWFRVVLDEAHTI 709
            +YVHYG SR +DAKLL+Q DVV+TTYGVL SE+S ENAE+ GGL++V+WFRVVLDEAHTI
Sbjct: 518  VYVHYGQSRARDAKLLSQYDVVITTYGVLASEFSAENAEDNGGLYTVQWFRVVLDEAHTI 577

Query: 710  KNSKSQISVATSALIADRRWCLTGTPIQNNLEDIYSLLRFLRVEP 844
            K+SKSQIS+A +AL+ADRRWCLTGTPIQNNLEDIYSLLRFL+VEP
Sbjct: 578  KSSKSQISIAAAALVADRRWCLTGTPIQNNLEDIYSLLRFLKVEP 622


>gb|AAS79594.1| putative DNA repair protein [Ipomoea trifida]
            gi|117166029|dbj|BAF36331.1| hypothetical protein
            [Ipomoea trifida]
          Length = 1040

 Score =  430 bits (1106), Expect = e-118
 Identities = 211/285 (74%), Positives = 242/285 (84%), Gaps = 4/285 (1%)
 Frame = +2

Query: 2    PPRTLQCELRPYQKQALHWMVQLEKGRCLEEAATTLHPCWDAYRLADKRELVIFLNVFSG 181
            PP TLQCELR YQKQALHWM QLE+   + +A TTLHPCW+AYRLADKR+LVI+LN FSG
Sbjct: 350  PPSTLQCELRSYQKQALHWMTQLEQVHSVNDAKTTLHPCWEAYRLADKRDLVIYLNAFSG 409

Query: 182  DATTEFPSTLQMSRGGILADAMGLGKTIMTIALLLSHSERGGSSGIQASEEATEINS--- 352
            DATTEFPSTLQM+RGGILAD+MGLGKTIMTIALLLS +ERGGS G Q++   +  N    
Sbjct: 410  DATTEFPSTLQMARGGILADSMGLGKTIMTIALLLSCTERGGSPGSQSTSLPSHENGNTI 469

Query: 353  -MSEQSPTPSKKMTKHSGFDKLLKPRTSLIGGGNLIVCPMTLLGQWKAEIETHGEPGSLS 529
             +S+QSPTPSKK  +  G +K LK + +L  GGNLIVCPMTLLGQWKAEIE H  PG+LS
Sbjct: 470  DISDQSPTPSKKAARFPGLEKFLKQKPTLKSGGNLIVCPMTLLGQWKAEIEMHACPGTLS 529

Query: 530  IYVHYGHSRPKDAKLLAQNDVVLTTYGVLTSEYSTENAEEGGGLHSVRWFRVVLDEAHTI 709
            +Y+HYG SR KD K +AQ+DVVLTTYGVL SE+S+ENAEE GGL SVRWFRVVLDEAHTI
Sbjct: 530  LYLHYGQSRSKDPKFIAQSDVVLTTYGVLASEFSSENAEENGGLFSVRWFRVVLDEAHTI 589

Query: 710  KNSKSQISVATSALIADRRWCLTGTPIQNNLEDIYSLLRFLRVEP 844
            K+SKSQIS+A SALIA+RRWCLTGTPIQNN+ED+YSLLRFLR+EP
Sbjct: 590  KSSKSQISIAASALIAERRWCLTGTPIQNNIEDVYSLLRFLRIEP 634