BLASTX nr result

ID: Coptis24_contig00016072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016072
         (1132 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40743.3| unnamed protein product [Vitis vinifera]              147   6e-33
ref|XP_002272934.1| PREDICTED: uncharacterized protein LOC100247...   138   2e-30
emb|CAN69460.1| hypothetical protein VITISV_021577 [Vitis vinifera]   127   5e-27
dbj|BAJ93352.1| predicted protein [Hordeum vulgare subsp. vulgare]    121   4e-25
ref|XP_002872110.1| hypothetical protein ARALYDRAFT_489300 [Arab...   120   6e-25

>emb|CBI40743.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  147 bits (370), Expect = 6e-33
 Identities = 113/385 (29%), Positives = 176/385 (45%), Gaps = 21/385 (5%)
 Frame = -3

Query: 1124 RSCIVKRIQRTKRFTRNHILLYKLRQL----DHKRVMHYLSVQQSQQFVYFATDKAFSNL 957
            R   VKR+ RT     + + L +++ L     H  ++ +  V+  Q FVY + ++   +L
Sbjct: 448  RPVAVKRLVRT----HHDVALKEIQNLIASDQHPNIVRWHGVEYDQDFVYLSLERCNCSL 503

Query: 956  HKVIYHFSGLVNEKSLDNLDISLWESNGYPSPILINLMSEICSGLAYVHQHDVVHGNLTP 777
              +IY  S      S D LD  LW++NGYPSP L+ LM ++ SGLA++H+  ++H +L P
Sbjct: 504  SDLIYLCSD-----SQDQLDFELWKTNGYPSPQLLKLMRDVVSGLAHLHELGIIHRDLKP 558

Query: 776  QNILIYSKEDGLHAKVADISMNQFL-----PANHYDDGDGISYWQTWRRF-HKINDNTAD 615
            QNILI  K   L AK++D+ +++ L        H+  G G S WQ   +  H       D
Sbjct: 559  QNILIIIKGKSLSAKLSDMGISKRLLGDMSSLTHHGTGYGSSGWQAPEQLRHGRQTRAVD 618

Query: 614  CFALGIVLYFCISKGKDVCDKQLVKKLDMKQNTSSTPYIS--MQAEHLCQMLLQ----WR 453
             F+LG VL+FC++ GK      L + +++  N      I    +A  L  +LL+     R
Sbjct: 619  LFSLGCVLFFCLTGGKHPYGDNLERDVNIVNNRKDLFLIENIPEAVDLFSLLLEPDPDLR 678

Query: 452  LSATDALKHPFFWDPEKHFNYFFDLS-----EFCKENCELTKLLESKRGDLLDNKSWLDA 288
              A D L HPFFW  E   ++  D+S     E  +   +L K LES  G L  N  W + 
Sbjct: 679  PKAMDVLHHPFFWSSEMRLSFLRDVSDRVELEDRENESQLLKQLES-IGTLALNGKWDEK 737

Query: 287  FEDDVKKEFMKKQKQYNFXXXXXXXXXXXXXXNHNEIMTAFKAHIDRPFMRNWYAYFEAK 108
             E       + + ++Y F              NH   + +    I  P    +  YF ++
Sbjct: 738  MEGAFINN-IGRYRRYKFDSVRDLLRVIRNKLNHYRELPSDIQEILGPVPEGFNLYFSSR 796

Query: 107  FSTFFTLLYYFVKEKCYRVPSLKKY 33
            F  F   +Y  +   C      +KY
Sbjct: 797  FPRFLIEVYKVIHTHCREEEFFQKY 821


>ref|XP_002272934.1| PREDICTED: uncharacterized protein LOC100247854 [Vitis vinifera]
          Length = 925

 Score =  138 bits (348), Expect = 2e-30
 Identities = 114/405 (28%), Positives = 179/405 (44%), Gaps = 41/405 (10%)
 Frame = -3

Query: 1124 RSCIVKRIQRTKRFTRNHILLYKLRQL----DHKRVMHYLSVQQSQQFVYFATDKAFSNL 957
            R   VKR+ RT     + + L +++ L     H  ++ +  V+  Q FVY + ++   +L
Sbjct: 521  RPVAVKRLVRT----HHDVALKEIQNLIASDQHPNIVRWHGVEYDQDFVYLSLERCNCSL 576

Query: 956  HKVIYHFSG----LVNEKSLDNL----------------DISLWESNGYPSPILINLMSE 837
              +IY  S     LVN+    N+                D  LW++NGYPSP L+ LM +
Sbjct: 577  SDLIYLCSDSQDQLVNQDWDSNILNEYIVRLHSIMDPNKDFELWKTNGYPSPQLLKLMRD 636

Query: 836  ICSGLAYVHQHDVVHGNLTPQNILIYSKEDGLHAKVADISMNQFL-----PANHYDDGDG 672
            + SGLA++H+  ++H +L PQNILI  K   L AK++D+ +++ L        H+  G G
Sbjct: 637  VVSGLAHLHELGIIHRDLKPQNILIIIKGKSLSAKLSDMGISKRLLGDMSSLTHHGTGYG 696

Query: 671  ISYWQTWRRF-HKINDNTADCFALGIVLYFCISKGKDVCDKQLVKKLDMKQNTSSTPYIS 495
             S WQ   +  H       D F+LG VL+FC++ GK      L + +++  N      I 
Sbjct: 697  SSGWQAPEQLRHGRQTRAVDLFSLGCVLFFCLTGGKHPYGDNLERDVNIVNNRKDLFLIE 756

Query: 494  --MQAEHLCQMLLQ----WRLSATDALKHPFFWDPEKHFNYFFDLS-----EFCKENCEL 348
               +A  L  +LL+     R  A D L HPFFW  E   ++  D+S     E  +   +L
Sbjct: 757  NIPEAVDLFSLLLEPDPDLRPKAMDVLHHPFFWSSEMRLSFLRDVSDRVELEDRENESQL 816

Query: 347  TKLLESKRGDLLDNKSWLDAFEDDVKKEFMKKQKQYNFXXXXXXXXXXXXXXNHNEIMTA 168
             K LES  G L  N  W +  E       + + ++Y F              NH   + +
Sbjct: 817  LKQLES-IGTLALNGKWDEKMEGAFINN-IGRYRRYKFDSVRDLLRVIRNKLNHYRELPS 874

Query: 167  FKAHIDRPFMRNWYAYFEAKFSTFFTLLYYFVKEKCYRVPSLKKY 33
                I  P    +  YF ++F  F   +Y  +   C      +KY
Sbjct: 875  DIQEILGPVPEGFNLYFSSRFPRFLIEVYKVIHTHCREEEFFQKY 919


>emb|CAN69460.1| hypothetical protein VITISV_021577 [Vitis vinifera]
          Length = 367

 Score =  127 bits (319), Expect = 5e-27
 Identities = 93/308 (30%), Positives = 141/308 (45%), Gaps = 17/308 (5%)
 Frame = -3

Query: 905 NLDISLWESNGYPSPILINLMSEICSGLAYVHQHDVVHGNLTPQNILIYSKEDGLHAKVA 726
           N D  LW++NGYPSP L+ LM ++ SGLA++H+  ++H +L PQNILI  K   L AK++
Sbjct: 4   NKDFELWKTNGYPSPQLLKLMRDVVSGLAHLHELGIIHRDLKPQNILIIIKGKSLSAKLS 63

Query: 725 DISMNQFL-----PANHYDDGDGISYWQTWRRF-HKINDNTADCFALGIVLYFCISKGKD 564
           D+ +++ L        H+  G G S WQ   +  H       D F+LG VL+FC++ GK 
Sbjct: 64  DMGISKRLLGDMSSLTHHGTGYGSSGWQAPEQLRHGRQTRAVDLFSLGCVLFFCLTGGKH 123

Query: 563 VCDKQLVKKLDMKQNTSSTPYIS--MQAEHLCQMLLQ----WRLSATDALKHPFFWDPEK 402
                L + +++  N      I    +A  L  +LL+     R  A D L HPFFW  E 
Sbjct: 124 PYGDNLERDVNIVNNRKDLFLIENIPEAVDLFSLLLEPDPDLRPKAMDVLHHPFFWSSEM 183

Query: 401 HFNYFFDLS-----EFCKENCELTKLLESKRGDLLDNKSWLDAFEDDVKKEFMKKQKQYN 237
             ++  D+S     E  +   +L K LES  G L  N  W +  E       + + ++Y 
Sbjct: 184 RLSFLRDVSDRVELEDRENESQLLKELES-IGTLALNGKWDEKMEGAFINN-IGRYRRYK 241

Query: 236 FXXXXXXXXXXXXXXNHNEIMTAFKAHIDRPFMRNWYAYFEAKFSTFFTLLYYFVKEKCY 57
           F              NH   + +    I  P    +  YF ++F  F   +Y  +   C 
Sbjct: 242 FDSVRDLLRVIRNKLNHYRELPSDIQEILGPVPEGFNLYFSSRFPRFLIEVYKVIHTHCR 301

Query: 56  RVPSLKKY 33
                +KY
Sbjct: 302 EEEFFQKY 309


>dbj|BAJ93352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 881

 Score =  121 bits (303), Expect = 4e-25
 Identities = 93/380 (24%), Positives = 170/380 (44%), Gaps = 15/380 (3%)
 Frame = -3

Query: 1124 RSCIVKRIQRTKRFTRNHILLYKLRQLDHKRVMHYLSVQQSQQFVYFATDKAFSNLHKVI 945
            R   VKR+ R+        +   +       ++      Q   FVY + ++   +L  +I
Sbjct: 502  REVAVKRLLRSHTDIAQKEIQNLIASDRDPNIVRLYGCDQDDNFVYISLERCHCSLADLI 561

Query: 944  YHFSGLVNEKSLDNLDISLWESNGYPSPILINLMSEICSGLAYVHQHDVVHGNLTPQNIL 765
               +   +   ++ +D+ LW  +G PSP L+ LM ++ +G+ ++H   ++H +L PQN+L
Sbjct: 562  QQHTD-PSFSDVEKIDVELWTQDGLPSPQLLKLMRDVVAGIVHLHSLGIIHRDLKPQNVL 620

Query: 764  IYSKEDGLHAKVADISMNQFL-----PANHYDDGDGISYWQTWRRFHKINDNTA-DCFAL 603
            I SKE  L AK++D+ +++ L       +H+  G G S WQ   +  + +   A D F+L
Sbjct: 621  I-SKEGSLSAKLSDMGISKRLQEDMSSLSHHGTGYGSSGWQAPEQLRRASQTRAMDLFSL 679

Query: 602  GIVLYFCISKGKDVCDKQLVKKLDMKQNTSSTPYIS--MQAEHLCQMLLQ----WRLSAT 441
            G ++++CI+KGK    +   + +++         +    +A HL  +LLQ     R +A 
Sbjct: 680  GCLIFYCITKGKHPFGEYYERDINIINGHFDLFVVDHIPEAVHLISLLLQPKPDERPTAM 739

Query: 440  DALKHPFFWDPEKHFNYFFDLSEFCKENCE--LTKLLESKRGDLLDNKSWLDAFEDDVKK 267
             A+ HP FW PE    +  D S+  ++  E  L   LES        K W +  +D +  
Sbjct: 740  YAINHPLFWSPELRLLFLRDTSDRIEKTTETDLLNALESIGHQAFGGK-WREKLDDGLVA 798

Query: 266  EFMKKQKQYNFXXXXXXXXXXXXXXNH-NEIMTAFKAHIDRPFMRNWYAYFEAKFSTFFT 90
            + + + ++YNF               H  E+ T  K  +       +  YF ++F     
Sbjct: 799  D-VGRYRKYNFESTRDLLRLIRNKSGHYRELPTDLKESLG-SLPEGFDRYFSSRFPKLLI 856

Query: 89   LLYYFVKEKCYRVPSLKKYY 30
             +Y  +   C      +KY+
Sbjct: 857  EVYKVMSVYCKDEEDFRKYF 876


>ref|XP_002872110.1| hypothetical protein ARALYDRAFT_489300 [Arabidopsis lyrata subsp.
            lyrata] gi|297317947|gb|EFH48369.1| hypothetical protein
            ARALYDRAFT_489300 [Arabidopsis lyrata subsp. lyrata]
          Length = 871

 Score =  120 bits (301), Expect = 6e-25
 Identities = 100/395 (25%), Positives = 170/395 (43%), Gaps = 31/395 (7%)
 Frame = -3

Query: 1124 RSCIVKRIQRTKRFTRNHILLYKLRQLDHKRVMHYLSVQQSQQFVYFATDKAFSNLHKVI 945
            R   VKR+ ++        +L  +    H  ++ +  V Q + F+Y + ++   +L+ +I
Sbjct: 474  RLVAVKRLVQSHHDVAQKEILNLMASDKHPNIVRWYGVDQDEHFIYISLERCACSLNDLI 533

Query: 944  YHFSGL----VNEKSLDNLD----------ISLWESNGYPSPILINLMSEICSGLAYVHQ 807
            Y  S L    V   S+  +           + LW+ NG+PSP+L+ LMS+I +GL ++H 
Sbjct: 534  YASSALLESPVASSSIQPIQRNPIFENGKGVELWKENGHPSPVLLKLMSDIVAGLVHLHD 593

Query: 806  HDVVHGNLTPQNILIYSKEDGLHAKVADISMNQFLPAN-----HYDDGDGISYWQTWRRF 642
              +VH +L PQN+LI  K   + AK++D+ +++ LPA+         G G S WQ   + 
Sbjct: 594  IGIVHRDLKPQNVLIV-KNSSVCAKLSDMGISKRLPADTSALTRNSTGSGSSGWQAPEQL 652

Query: 641  HKINDNTA-DCFALGIVLYFCISKGKDVCDKQLVKKLDMKQNTSSTPYISM--QAEHLCQ 471
                   A D F+LG VL+FC++ GK        + +++  +      I    +A HL  
Sbjct: 653  RNERQTRAVDLFSLGCVLFFCMTAGKHPYGDNYERDVNVLNDRKDLFLIESLPEAVHLLS 712

Query: 470  MLL----QWRLSATDALKHPFFWDPEKHFNYFFDLS-----EFCKENCELTKLLESKRGD 318
             LL      R  A + L HP FW+ +   ++  D S     E  +E  +L   LES    
Sbjct: 713  GLLNPDPNLRPRAQEVLHHPLFWNSDMRLSFLRDASDRVELENREEGSQLLAALESTAAV 772

Query: 317  LLDNKSWLDAFEDDVKKEFMKKQKQYNFXXXXXXXXXXXXXXNHNEIMTAFKAHIDRPFM 138
             L N  W D   D +  + + + ++Y F              NH   +      +     
Sbjct: 773  TL-NGRW-DEKLDSIFLDNIGRYRRYKFDSIRDLLRVIRNKLNHYRELPKELQELLGSVP 830

Query: 137  RNWYAYFEAKFSTFFTLLYYFVKEKCYRVPSLKKY 33
              +  YF ++F      +Y  + + C       KY
Sbjct: 831  EGFERYFSSRFPKLLIQVYTVLFDYCNNEEFFFKY 865


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