BLASTX nr result

ID: Coptis24_contig00016055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016055
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869906.1| hypothetical protein ARALYDRAFT_329490 [Arab...    64   6e-17
ref|NP_193844.2| amino acid transporter 1 [Arabidopsis thaliana]...    63   1e-16
ref|XP_002318265.1| cationic amino acid transporter [Populus tri...    66   1e-15
ref|XP_002526614.1| cationic amino acid transporter, putative [R...    64   2e-15
ref|XP_002319043.1| cationic amino acid transporter [Populus tri...    65   3e-15

>ref|XP_002869906.1| hypothetical protein ARALYDRAFT_329490 [Arabidopsis lyrata subsp.
           lyrata] gi|297315742|gb|EFH46165.1| hypothetical protein
           ARALYDRAFT_329490 [Arabidopsis lyrata subsp. lyrata]
          Length = 599

 Score = 63.5 bits (153), Expect(2) = 6e-17
 Identities = 31/42 (73%), Positives = 33/42 (78%)
 Frame = -1

Query: 127 DLMWFGIGVVIGSRIFVLTGQEAKEIVGPAVVLPYAISGPSA 2
           DLMWFGIG VIGS IFVLTG EA+   GPAVVL Y +SG SA
Sbjct: 80  DLMWFGIGAVIGSGIFVLTGLEARNASGPAVVLSYVVSGVSA 121



 Score = 48.5 bits (114), Expect(2) = 6e-17
 Identities = 22/35 (62%), Positives = 24/35 (68%)
 Frame = -2

Query: 237 DVNQKTRGCTCTKDAFLPEESFQKRGNYGKVWKPT 133
           D   + RGC+CTKD FLPEESFQ  GNY K  K T
Sbjct: 9   DDGLRRRGCSCTKDDFLPEESFQSMGNYLKALKET 43


>ref|NP_193844.2| amino acid transporter 1 [Arabidopsis thaliana]
           gi|75297892|sp|Q84MA5.1|CAAT1_ARATH RecName:
           Full=Cationic amino acid transporter 1; AltName:
           Full=Amino acid transporter 1 gi|30102670|gb|AAP21253.1|
           At4g21120 [Arabidopsis thaliana]
           gi|110743257|dbj|BAE99519.1| amino acid transport
           protein AAT1 [Arabidopsis thaliana]
           gi|332659005|gb|AEE84405.1| amino acid transporter 1
           [Arabidopsis thaliana]
          Length = 594

 Score = 62.8 bits (151), Expect(2) = 1e-16
 Identities = 31/42 (73%), Positives = 33/42 (78%)
 Frame = -1

Query: 127 DLMWFGIGVVIGSRIFVLTGQEAKEIVGPAVVLPYAISGPSA 2
           DLMWFGIG VIGS IFVLTG EA+   GPAVVL Y +SG SA
Sbjct: 78  DLMWFGIGAVIGSGIFVLTGLEARNHSGPAVVLSYVVSGVSA 119



 Score = 48.5 bits (114), Expect(2) = 1e-16
 Identities = 22/35 (62%), Positives = 24/35 (68%)
 Frame = -2

Query: 237 DVNQKTRGCTCTKDAFLPEESFQKRGNYGKVWKPT 133
           D   + RGC+CTKD FLPEESFQ  GNY K  K T
Sbjct: 7   DDGLRRRGCSCTKDDFLPEESFQSMGNYLKALKET 41


>ref|XP_002318265.1| cationic amino acid transporter [Populus trichocarpa]
           gi|222858938|gb|EEE96485.1| cationic amino acid
           transporter [Populus trichocarpa]
          Length = 588

 Score = 65.9 bits (159), Expect(2) = 1e-15
 Identities = 34/50 (68%), Positives = 39/50 (78%), Gaps = 2/50 (4%)
 Frame = -1

Query: 145 MEANMT--DLMWFGIGVVIGSRIFVLTGQEAKEIVGPAVVLPYAISGPSA 2
           M+ N+T  DL+WFGIG VIG+ IFVLTG EAKE  GPAVVL Y +SG SA
Sbjct: 64  MKKNLTWWDLIWFGIGAVIGAGIFVLTGLEAKEHAGPAVVLSYVVSGVSA 113



 Score = 41.6 bits (96), Expect(2) = 1e-15
 Identities = 18/28 (64%), Positives = 21/28 (75%)
 Frame = -2

Query: 216 GCTCTKDAFLPEESFQKRGNYGKVWKPT 133
           GC+CTK+ FLPEESFQ  GNY +  K T
Sbjct: 8   GCSCTKNDFLPEESFQSIGNYLQALKET 35


>ref|XP_002526614.1| cationic amino acid transporter, putative [Ricinus communis]
           gi|223534054|gb|EEF35773.1| cationic amino acid
           transporter, putative [Ricinus communis]
          Length = 587

 Score = 64.3 bits (155), Expect(2) = 2e-15
 Identities = 32/50 (64%), Positives = 39/50 (78%), Gaps = 2/50 (4%)
 Frame = -1

Query: 145 MEANMT--DLMWFGIGVVIGSRIFVLTGQEAKEIVGPAVVLPYAISGPSA 2
           M+ N+T  DL+WFGIG VIG+ IFVLTG EA+ + GPAVVL Y +SG SA
Sbjct: 71  MKKNLTWWDLIWFGIGAVIGAGIFVLTGLEAQSVAGPAVVLSYVVSGISA 120



 Score = 42.4 bits (98), Expect(2) = 2e-15
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = -2

Query: 243 NADVNQKTRGCTCTKDAFLPEESFQKRGNYGKVWKPT 133
           + D   + RGC+CTK  F+PEESFQ  G+Y K    T
Sbjct: 6   DGDEGVRRRGCSCTKSDFIPEESFQSMGSYLKALSET 42


>ref|XP_002319043.1| cationic amino acid transporter [Populus trichocarpa]
           gi|222857419|gb|EEE94966.1| cationic amino acid
           transporter [Populus trichocarpa]
          Length = 604

 Score = 65.5 bits (158), Expect(2) = 3e-15
 Identities = 32/50 (64%), Positives = 39/50 (78%), Gaps = 2/50 (4%)
 Frame = -1

Query: 145 MEANMT--DLMWFGIGVVIGSRIFVLTGQEAKEIVGPAVVLPYAISGPSA 2
           M+ N+T  DLMWFG+G V+G+ IFVLTG EA+E  GPAVVL Y +SG SA
Sbjct: 72  MKKNLTWWDLMWFGVGAVVGAGIFVLTGLEARENTGPAVVLSYVVSGVSA 121



 Score = 40.8 bits (94), Expect(2) = 3e-15
 Identities = 17/24 (70%), Positives = 19/24 (79%)
 Frame = -2

Query: 225 KTRGCTCTKDAFLPEESFQKRGNY 154
           K RGC+CTKD FLPEESF+   NY
Sbjct: 13  KKRGCSCTKDDFLPEESFRSWTNY 36


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