BLASTX nr result
ID: Coptis24_contig00016055
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00016055 (277 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002869906.1| hypothetical protein ARALYDRAFT_329490 [Arab... 64 6e-17 ref|NP_193844.2| amino acid transporter 1 [Arabidopsis thaliana]... 63 1e-16 ref|XP_002318265.1| cationic amino acid transporter [Populus tri... 66 1e-15 ref|XP_002526614.1| cationic amino acid transporter, putative [R... 64 2e-15 ref|XP_002319043.1| cationic amino acid transporter [Populus tri... 65 3e-15 >ref|XP_002869906.1| hypothetical protein ARALYDRAFT_329490 [Arabidopsis lyrata subsp. lyrata] gi|297315742|gb|EFH46165.1| hypothetical protein ARALYDRAFT_329490 [Arabidopsis lyrata subsp. lyrata] Length = 599 Score = 63.5 bits (153), Expect(2) = 6e-17 Identities = 31/42 (73%), Positives = 33/42 (78%) Frame = -1 Query: 127 DLMWFGIGVVIGSRIFVLTGQEAKEIVGPAVVLPYAISGPSA 2 DLMWFGIG VIGS IFVLTG EA+ GPAVVL Y +SG SA Sbjct: 80 DLMWFGIGAVIGSGIFVLTGLEARNASGPAVVLSYVVSGVSA 121 Score = 48.5 bits (114), Expect(2) = 6e-17 Identities = 22/35 (62%), Positives = 24/35 (68%) Frame = -2 Query: 237 DVNQKTRGCTCTKDAFLPEESFQKRGNYGKVWKPT 133 D + RGC+CTKD FLPEESFQ GNY K K T Sbjct: 9 DDGLRRRGCSCTKDDFLPEESFQSMGNYLKALKET 43 >ref|NP_193844.2| amino acid transporter 1 [Arabidopsis thaliana] gi|75297892|sp|Q84MA5.1|CAAT1_ARATH RecName: Full=Cationic amino acid transporter 1; AltName: Full=Amino acid transporter 1 gi|30102670|gb|AAP21253.1| At4g21120 [Arabidopsis thaliana] gi|110743257|dbj|BAE99519.1| amino acid transport protein AAT1 [Arabidopsis thaliana] gi|332659005|gb|AEE84405.1| amino acid transporter 1 [Arabidopsis thaliana] Length = 594 Score = 62.8 bits (151), Expect(2) = 1e-16 Identities = 31/42 (73%), Positives = 33/42 (78%) Frame = -1 Query: 127 DLMWFGIGVVIGSRIFVLTGQEAKEIVGPAVVLPYAISGPSA 2 DLMWFGIG VIGS IFVLTG EA+ GPAVVL Y +SG SA Sbjct: 78 DLMWFGIGAVIGSGIFVLTGLEARNHSGPAVVLSYVVSGVSA 119 Score = 48.5 bits (114), Expect(2) = 1e-16 Identities = 22/35 (62%), Positives = 24/35 (68%) Frame = -2 Query: 237 DVNQKTRGCTCTKDAFLPEESFQKRGNYGKVWKPT 133 D + RGC+CTKD FLPEESFQ GNY K K T Sbjct: 7 DDGLRRRGCSCTKDDFLPEESFQSMGNYLKALKET 41 >ref|XP_002318265.1| cationic amino acid transporter [Populus trichocarpa] gi|222858938|gb|EEE96485.1| cationic amino acid transporter [Populus trichocarpa] Length = 588 Score = 65.9 bits (159), Expect(2) = 1e-15 Identities = 34/50 (68%), Positives = 39/50 (78%), Gaps = 2/50 (4%) Frame = -1 Query: 145 MEANMT--DLMWFGIGVVIGSRIFVLTGQEAKEIVGPAVVLPYAISGPSA 2 M+ N+T DL+WFGIG VIG+ IFVLTG EAKE GPAVVL Y +SG SA Sbjct: 64 MKKNLTWWDLIWFGIGAVIGAGIFVLTGLEAKEHAGPAVVLSYVVSGVSA 113 Score = 41.6 bits (96), Expect(2) = 1e-15 Identities = 18/28 (64%), Positives = 21/28 (75%) Frame = -2 Query: 216 GCTCTKDAFLPEESFQKRGNYGKVWKPT 133 GC+CTK+ FLPEESFQ GNY + K T Sbjct: 8 GCSCTKNDFLPEESFQSIGNYLQALKET 35 >ref|XP_002526614.1| cationic amino acid transporter, putative [Ricinus communis] gi|223534054|gb|EEF35773.1| cationic amino acid transporter, putative [Ricinus communis] Length = 587 Score = 64.3 bits (155), Expect(2) = 2e-15 Identities = 32/50 (64%), Positives = 39/50 (78%), Gaps = 2/50 (4%) Frame = -1 Query: 145 MEANMT--DLMWFGIGVVIGSRIFVLTGQEAKEIVGPAVVLPYAISGPSA 2 M+ N+T DL+WFGIG VIG+ IFVLTG EA+ + GPAVVL Y +SG SA Sbjct: 71 MKKNLTWWDLIWFGIGAVIGAGIFVLTGLEAQSVAGPAVVLSYVVSGISA 120 Score = 42.4 bits (98), Expect(2) = 2e-15 Identities = 18/37 (48%), Positives = 23/37 (62%) Frame = -2 Query: 243 NADVNQKTRGCTCTKDAFLPEESFQKRGNYGKVWKPT 133 + D + RGC+CTK F+PEESFQ G+Y K T Sbjct: 6 DGDEGVRRRGCSCTKSDFIPEESFQSMGSYLKALSET 42 >ref|XP_002319043.1| cationic amino acid transporter [Populus trichocarpa] gi|222857419|gb|EEE94966.1| cationic amino acid transporter [Populus trichocarpa] Length = 604 Score = 65.5 bits (158), Expect(2) = 3e-15 Identities = 32/50 (64%), Positives = 39/50 (78%), Gaps = 2/50 (4%) Frame = -1 Query: 145 MEANMT--DLMWFGIGVVIGSRIFVLTGQEAKEIVGPAVVLPYAISGPSA 2 M+ N+T DLMWFG+G V+G+ IFVLTG EA+E GPAVVL Y +SG SA Sbjct: 72 MKKNLTWWDLMWFGVGAVVGAGIFVLTGLEARENTGPAVVLSYVVSGVSA 121 Score = 40.8 bits (94), Expect(2) = 3e-15 Identities = 17/24 (70%), Positives = 19/24 (79%) Frame = -2 Query: 225 KTRGCTCTKDAFLPEESFQKRGNY 154 K RGC+CTKD FLPEESF+ NY Sbjct: 13 KKRGCSCTKDDFLPEESFRSWTNY 36