BLASTX nr result

ID: Coptis24_contig00016050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016050
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315186.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
ref|XP_002276362.1| PREDICTED: uncharacterized protein LOC100263...   142   4e-32
emb|CAN65630.1| hypothetical protein VITISV_019369 [Vitis vinifera]   141   6e-32
ref|XP_002312133.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002530400.1| conserved hypothetical protein [Ricinus comm...   138   4e-31

>ref|XP_002315186.1| predicted protein [Populus trichocarpa] gi|222864226|gb|EEF01357.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  149 bits (377), Expect = 2e-34
 Identities = 73/105 (69%), Positives = 87/105 (82%)
 Frame = +1

Query: 40  CSDHSINRNIKDHPIESSMAKYIVQQYIAAAGGDKALNGIGSLYAMGKVKMVASDFSSGD 219
           C    INRNIKDHPIESSMAKYIVQQYIAA GG++ALN + S+YAMGKVKMVAS+F +G+
Sbjct: 81  CDHQFINRNIKDHPIESSMAKYIVQQYIAAVGGERALNSVDSMYAMGKVKMVASEFCAGE 140

Query: 220 GIKTTFNNKKEVKVKSLRNHGVGEVGAFVLWQKRPDLWCLELVLS 354
           G   + NN K +KVK+ + HG GE+G FVLW+KRPDLWCLELV+S
Sbjct: 141 G---SLNNNKTLKVKN-QKHGGGEMGGFVLWKKRPDLWCLELVVS 181


>ref|XP_002276362.1| PREDICTED: uncharacterized protein LOC100263234 [Vitis vinifera]
           gi|296086114|emb|CBI31555.3| unnamed protein product
           [Vitis vinifera]
          Length = 426

 Score =  142 bits (357), Expect = 4e-32
 Identities = 71/105 (67%), Positives = 85/105 (80%)
 Frame = +1

Query: 40  CSDHSINRNIKDHPIESSMAKYIVQQYIAAAGGDKALNGIGSLYAMGKVKMVASDFSSGD 219
           C  H IN++IKDHPIE+SMAKYIVQQYIAAAGG+ ALN I S+YAMGKV+MV S+FS+G+
Sbjct: 81  CDRHPINQSIKDHPIEASMAKYIVQQYIAAAGGETALNSIDSMYAMGKVRMVTSEFSAGE 140

Query: 220 GIKTTFNNKKEVKVKSLRNHGVGEVGAFVLWQKRPDLWCLELVLS 354
             K      K +KVK +R HG GE+G FVLWQKRP+LWCLELV+S
Sbjct: 141 VCK-----NKAMKVKGVR-HGGGEMGGFVLWQKRPELWCLELVVS 179


>emb|CAN65630.1| hypothetical protein VITISV_019369 [Vitis vinifera]
          Length = 426

 Score =  141 bits (355), Expect = 6e-32
 Identities = 71/105 (67%), Positives = 85/105 (80%)
 Frame = +1

Query: 40  CSDHSINRNIKDHPIESSMAKYIVQQYIAAAGGDKALNGIGSLYAMGKVKMVASDFSSGD 219
           C  H IN++IKDHPIE+SMAKYIVQQYIAAAGG+ ALN I S+YAMGKV M+AS+FS+G+
Sbjct: 81  CDRHPINQSIKDHPIEASMAKYIVQQYIAAAGGETALNSIDSMYAMGKVTMMASEFSAGE 140

Query: 220 GIKTTFNNKKEVKVKSLRNHGVGEVGAFVLWQKRPDLWCLELVLS 354
             K      K +KVK +R HG GE+G FVLWQKRP+LWCLELV+S
Sbjct: 141 VCK-----NKAMKVKGVR-HGGGEMGGFVLWQKRPELWCLELVVS 179


>ref|XP_002312133.1| predicted protein [Populus trichocarpa] gi|222851953|gb|EEE89500.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  140 bits (353), Expect = 1e-31
 Identities = 69/105 (65%), Positives = 85/105 (80%)
 Frame = +1

Query: 40  CSDHSINRNIKDHPIESSMAKYIVQQYIAAAGGDKALNGIGSLYAMGKVKMVASDFSSGD 219
           C    IN NIKD PIE+SMAKYIVQQYIAA GG++ALN + S+YAMGKVKM AS+F +G+
Sbjct: 81  CDHQLINCNIKDQPIEASMAKYIVQQYIAAVGGERALNSVDSMYAMGKVKMEASEFCAGE 140

Query: 220 GIKTTFNNKKEVKVKSLRNHGVGEVGAFVLWQKRPDLWCLELVLS 354
           G   + N+ K ++VK+ +NHG GE+G FVLWQKRPDLWCLELV+S
Sbjct: 141 G---SLNSNKVLRVKN-QNHGGGEMGGFVLWQKRPDLWCLELVVS 181


>ref|XP_002530400.1| conserved hypothetical protein [Ricinus communis]
           gi|223530049|gb|EEF31970.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 425

 Score =  138 bits (348), Expect = 4e-31
 Identities = 69/105 (65%), Positives = 83/105 (79%)
 Frame = +1

Query: 40  CSDHSINRNIKDHPIESSMAKYIVQQYIAAAGGDKALNGIGSLYAMGKVKMVASDFSSGD 219
           C    INRN+KD PIE+SMAKYIVQQYIAA GG+ ALN + S+YAMGKV+M AS+F +G+
Sbjct: 81  CDHQFINRNMKDEPIEASMAKYIVQQYIAAVGGEGALNSVDSMYAMGKVRMAASEFCAGE 140

Query: 220 GIKTTFNNKKEVKVKSLRNHGVGEVGAFVLWQKRPDLWCLELVLS 354
           G      N K +KVK++RN G GE+G FVLWQKRPDLWCLELV+S
Sbjct: 141 GSL----NNKVLKVKNMRNGG-GEMGGFVLWQKRPDLWCLELVVS 180


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