BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016039
         (1112 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631894.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...   142   1e-31
ref|XP_002265926.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...   142   1e-31
ref|XP_003519868.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...   140   6e-31
ref|XP_002521656.1| ap endonuclease, putative [Ricinus communis]...   134   4e-29
ref|XP_003629318.1| DNA-(apurinic or apyrimidinic site) lyase [M...   132   1e-28

>ref|XP_003631894.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like isoform
           2 [Vitis vinifera]
          Length = 596

 Score =  142 bits (359), Expect = 1e-31
 Identities = 75/174 (43%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
 Frame = +3

Query: 60  SNKKARHGSPIQQTLGSYFRKKTGLNFDTDCSNSDTSLSQEGFSRRDAXXXXXXXXXXXX 239
           + KKAR     Q +L S+F+K + +    D + +D SL Q   S+ +             
Sbjct: 432 TKKKARQSQCSQLSLKSFFQKSSNVKDGVDNAAADASLDQADESKSNQNPNKTS------ 485

Query: 240 XGFLVGNDAKTSILMNEVNTTPSTKDQGDA-SACSPEKEKHNVALLEWQRIHQLMHNRSC 416
               +G+D   S  M E++ + S ++QG   S  SP+++K+++AL+EWQRI QLM N   
Sbjct: 486 ----MGDDESKSSKMVELDVSASNQEQGVVISGSSPQRDKNDIALVEWQRIQQLMQNS-- 539

Query: 417 VPFCKGHGEPCVARVVKKEGPNLGRKFYCCRRAEGPSSNPEARCDYFKWETLKS 578
           +P CKGHGEPCV+R+ KK GPN GR+FY C RAEGP+SNPE  C YFKW   KS
Sbjct: 540 IPLCKGHGEPCVSRLAKKPGPNHGRRFYVCARAEGPASNPETNCGYFKWAASKS 593


>ref|XP_002265926.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like isoform
           1 [Vitis vinifera]
          Length = 625

 Score =  142 bits (359), Expect = 1e-31
 Identities = 75/174 (43%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
 Frame = +3

Query: 60  SNKKARHGSPIQQTLGSYFRKKTGLNFDTDCSNSDTSLSQEGFSRRDAXXXXXXXXXXXX 239
           + KKAR     Q +L S+F+K + +    D + +D SL Q   S+ +             
Sbjct: 461 TKKKARQSQCSQLSLKSFFQKSSNVKDGVDNAAADASLDQADESKSNQNPNKTS------ 514

Query: 240 XGFLVGNDAKTSILMNEVNTTPSTKDQGDA-SACSPEKEKHNVALLEWQRIHQLMHNRSC 416
               +G+D   S  M E++ + S ++QG   S  SP+++K+++AL+EWQRI QLM N   
Sbjct: 515 ----MGDDESKSSKMVELDVSASNQEQGVVISGSSPQRDKNDIALVEWQRIQQLMQNS-- 568

Query: 417 VPFCKGHGEPCVARVVKKEGPNLGRKFYCCRRAEGPSSNPEARCDYFKWETLKS 578
           +P CKGHGEPCV+R+ KK GPN GR+FY C RAEGP+SNPE  C YFKW   KS
Sbjct: 569 IPLCKGHGEPCVSRLAKKPGPNHGRRFYVCARAEGPASNPETNCGYFKWAASKS 622


>ref|XP_003519868.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like
           [Glycine max]
          Length = 622

 Score =  140 bits (353), Expect = 6e-31
 Identities = 78/188 (41%), Positives = 101/188 (53%)
 Frame = +3

Query: 15  SRSETRNLVPVRCLKSNKKARHGSPIQQTLGSYFRKKTGLNFDTDCSNSDTSLSQEGFSR 194
           S SE +     +C +SNKKAR+G   Q +L S+F+K T L+  +           +  + 
Sbjct: 437 SGSENKKSTTRQCNRSNKKARNGQWSQLSLRSFFQKSTNLDKGSSIKEVVNDSCTDYSNN 496

Query: 195 RDAXXXXXXXXXXXXXGFLVGNDAKTSILMNEVNTTPSTKDQGDASACSPEKEKHNVALL 374
             A                  N +       E++T     D    +  S ++EK NVA L
Sbjct: 497 NQAEPSQPSPRLQEIPTVCAHNGSPKQY---ELDTDTCDPDLAGPNGSSTKEEKSNVASL 553

Query: 375 EWQRIHQLMHNRSCVPFCKGHGEPCVARVVKKEGPNLGRKFYCCRRAEGPSSNPEARCDY 554
           EWQRI QLM N   +P CKGH EPC+ARVVKK+GPN GR+FY C RAEGP+SNPEA C Y
Sbjct: 554 EWQRIKQLMQNS--IPICKGHKEPCIARVVKKQGPNFGRRFYVCARAEGPASNPEANCGY 611

Query: 555 FKWETLKS 578
           FKW + KS
Sbjct: 612 FKWASSKS 619


>ref|XP_002521656.1| ap endonuclease, putative [Ricinus communis]
           gi|223539047|gb|EEF40643.1| ap endonuclease, putative
           [Ricinus communis]
          Length = 586

 Score =  134 bits (337), Expect = 4e-29
 Identities = 75/187 (40%), Positives = 104/187 (55%)
 Frame = +3

Query: 24  ETRNLVPVRCLKSNKKARHGSPIQQTLGSYFRKKTGLNFDTDCSNSDTSLSQEGFSRRDA 203
           ++R++  +    + KKAR     Q +L S+F++        + +  D S SQE  S  ++
Sbjct: 411 QSRHINSMHTEGTKKKARKSQCSQLSLRSFFQRTPNTRSGAENTALDISHSQENVSNSNS 470

Query: 204 XXXXXXXXXXXXXGFLVGNDAKTSILMNEVNTTPSTKDQGDASACSPEKEKHNVALLEWQ 383
                             +D   +     +N++  T+DQ + +    EKEK+NVALLEWQ
Sbjct: 471 PPSETASQ----------DDHNNTPGHCGLNSSSGTQDQDEINNGPSEKEKNNVALLEWQ 520

Query: 384 RIHQLMHNRSCVPFCKGHGEPCVARVVKKEGPNLGRKFYCCRRAEGPSSNPEARCDYFKW 563
           RI QLM N   +P CKGH EPCV+R+VKK GP  G +FY C RAEGP+SNPEA C YFKW
Sbjct: 521 RIQQLMQNS--IPLCKGHKEPCVSRIVKKPGPTCGHRFYVCARAEGPASNPEANCGYFKW 578

Query: 564 ETLKSGQ 584
            + KS Q
Sbjct: 579 ASSKSRQ 585


>ref|XP_003629318.1| DNA-(apurinic or apyrimidinic site) lyase [Medicago truncatula]
           gi|355523340|gb|AET03794.1| DNA-(apurinic or
           apyrimidinic site) lyase [Medicago truncatula]
          Length = 613

 Score =  132 bits (333), Expect = 1e-28
 Identities = 74/177 (41%), Positives = 101/177 (57%)
 Frame = +3

Query: 48  RCLKSNKKARHGSPIQQTLGSYFRKKTGLNFDTDCSNSDTSLSQEGFSRRDAXXXXXXXX 227
           +C +S KKAR+    Q ++ S+F+K T L    D    D+ +S   +S  +A        
Sbjct: 446 KCNESKKKARNSQSSQLSIRSFFQKSTSL----DNGVKDSCIS---YSNNEAEPSQPNSQ 498

Query: 228 XXXXXGFLVGNDAKTSILMNEVNTTPSTKDQGDASACSPEKEKHNVALLEWQRIHQLMHN 407
                  +   D  ++   +E+N     +D  + +  S ++EK NVA  EWQRI +LM N
Sbjct: 499 LLETCTII---DHSSNPGQDEINADVCGQDLAEINNSSRKEEKSNVASQEWQRIQKLMQN 555

Query: 408 RSCVPFCKGHGEPCVARVVKKEGPNLGRKFYCCRRAEGPSSNPEARCDYFKWETLKS 578
              +P CKGH EPC+ARVVKK+G N GR+FY C RAEGP+SNPEA C YFKW T KS
Sbjct: 556 S--IPLCKGHKEPCIARVVKKQGANFGRRFYTCARAEGPASNPEANCGYFKWATSKS 610