BLASTX nr result

ID: Coptis24_contig00016034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016034
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42963.1| unknown [Medicago truncatula]                          100   2e-19
gb|AFK42249.1| unknown [Medicago truncatula]                          100   2e-19
gb|AFC90090.1| brix domain-containing protein [Nicotiana bentham...    98   8e-19
gb|ACJ84298.1| unknown [Medicago truncatula]                           98   8e-19
ref|XP_004161267.1| PREDICTED: ribosome production factor 2 homo...    97   1e-18

>gb|AFK42963.1| unknown [Medicago truncatula]
          Length = 341

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/74 (64%), Positives = 54/74 (72%)
 Frame = +2

Query: 2   FFAFIGEGFXXXXXXXXXXXXXXDLFRGEVIENLNLAGVDRVFVCTVVSSKKVFLTHCAL 181
           F AFIGEGF              DLFRGEV+ENLNLAGVDR +VCT +S  KVF THCAL
Sbjct: 170 FMAFIGEGFESVNELKQLKEVLLDLFRGEVVENLNLAGVDRAYVCTALSPTKVFFTHCAL 229

Query: 182 RLKRSGTVIPRMDL 223
           RLK+SGTV+PRM+L
Sbjct: 230 RLKKSGTVVPRMEL 243


>gb|AFK42249.1| unknown [Medicago truncatula]
          Length = 341

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/74 (64%), Positives = 54/74 (72%)
 Frame = +2

Query: 2   FFAFIGEGFXXXXXXXXXXXXXXDLFRGEVIENLNLAGVDRVFVCTVVSSKKVFLTHCAL 181
           F AFIGEGF              DLFRGEV+ENLNLAGVDR +VCT +S  KVF THCAL
Sbjct: 170 FMAFIGEGFESVNELKQLKEVLLDLFRGEVVENLNLAGVDRAYVCTALSPTKVFFTHCAL 229

Query: 182 RLKRSGTVIPRMDL 223
           RLK+SGTV+PRM+L
Sbjct: 230 RLKKSGTVVPRMEL 243


>gb|AFC90090.1| brix domain-containing protein [Nicotiana benthamiana]
          Length = 321

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/74 (63%), Positives = 55/74 (74%)
 Frame = +2

Query: 2   FFAFIGEGFXXXXXXXXXXXXXXDLFRGEVIENLNLAGVDRVFVCTVVSSKKVFLTHCAL 181
           FF FIGEGF              DLF GEV+ NLNLAG+D V++CTVVS KKVFLTHCAL
Sbjct: 151 FFTFIGEGFESVEELKHLKEVLLDLFHGEVVTNLNLAGLDCVYLCTVVSPKKVFLTHCAL 210

Query: 182 RLKRSGTVIPRMDL 223
           RLK+SGTV+PR++L
Sbjct: 211 RLKKSGTVVPRIEL 224


>gb|ACJ84298.1| unknown [Medicago truncatula]
          Length = 253

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/74 (63%), Positives = 53/74 (71%)
 Frame = +2

Query: 2   FFAFIGEGFXXXXXXXXXXXXXXDLFRGEVIENLNLAGVDRVFVCTVVSSKKVFLTHCAL 181
           F AFIGEGF              DLFRGEV+ENLNLAGVDR +VCT +S  KVF THCAL
Sbjct: 82  FMAFIGEGFESVNELKQLKEVLLDLFRGEVVENLNLAGVDRAYVCTALSPTKVFFTHCAL 141

Query: 182 RLKRSGTVIPRMDL 223
           RLK+ GTV+PRM+L
Sbjct: 142 RLKKFGTVVPRMEL 155


>ref|XP_004161267.1| PREDICTED: ribosome production factor 2 homolog [Cucumis sativus]
          Length = 386

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 45/74 (60%), Positives = 54/74 (72%)
 Frame = +2

Query: 2   FFAFIGEGFXXXXXXXXXXXXXXDLFRGEVIENLNLAGVDRVFVCTVVSSKKVFLTHCAL 181
           F  FIGEGF              D FRGEV+ENLNL+G+DRV+VCT +S  KVFLTHCAL
Sbjct: 145 FITFIGEGFENVEELKHLKEVLLDFFRGEVVENLNLSGLDRVYVCTAISPNKVFLTHCAL 204

Query: 182 RLKRSGTVIPRMDL 223
           RLK+SG+V+PRM+L
Sbjct: 205 RLKKSGSVVPRMEL 218


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