BLASTX nr result

ID: Coptis24_contig00016025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016025
         (1061 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19594.3| unnamed protein product [Vitis vinifera]               63   1e-07
ref|XP_002282153.1| PREDICTED: probable transcription factor KAN...    62   2e-07

>emb|CBI19594.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
 Frame = -1

Query: 809 TDKGAAGQGQTDMGLNQMTGIVEVEAGGLSCDKSEINLSRSXXXXXXXXXXXXXXPISAS 630
           TDKG  GQGQTDMGLNQ TGI +VE GGLSCDK++   S                  S++
Sbjct: 144 TDKGT-GQGQTDMGLNQRTGIGQVELGGLSCDKADATPS-----------------FSSN 185

Query: 629 LDTRGSSTMMGRNAWSPSIQENQPTH-SHFNSIEVSHKPTMDNVC---RPGQPVSHSENE 462
                +   + R++WS S++ N     SH N ++ SH    D      +    V+    E
Sbjct: 186 TPQPSTPQKISRSSWSLSMETNDEGRLSHENGLKYSHLMANDTKMEGHKVALHVAEGPKE 245

Query: 461 NMYLSSLAYSQIIL 420
            +  S+L+ S ++L
Sbjct: 246 RVDSSALSPSDMLL 259


>ref|XP_002282153.1| PREDICTED: probable transcription factor KAN4-like [Vitis vinifera]
          Length = 338

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 12/142 (8%)
 Frame = -1

Query: 809 TDKGAA--------GQGQTDMGLNQMTGIVEVEAGGLSCDKSEINLSRSXXXXXXXXXXX 654
           TDKG A        GQGQTDMGLNQ TGI +VE GGLSCDK++   S             
Sbjct: 186 TDKGTARAMALCIAGQGQTDMGLNQRTGIGQVELGGLSCDKADATPS------------- 232

Query: 653 XXXPISASLDTRGSSTMMGRNAWSPSIQENQPTH-SHFNSIEVSHKPTMDNVC---RPGQ 486
                S++     +   + R++WS S++ N     SH N ++ SH    D      +   
Sbjct: 233 ----FSSNTPQPSTPQKISRSSWSLSMETNDEGRLSHENGLKYSHLMANDTKMEGHKVAL 288

Query: 485 PVSHSENENMYLSSLAYSQIIL 420
            V+    E +  S+L+ S ++L
Sbjct: 289 HVAEGPKERVDSSALSPSDMLL 310


Top