BLASTX nr result

ID: Coptis24_contig00016006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00016006
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312864.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
dbj|BAJ90403.1| predicted protein [Hordeum vulgare subsp. vulgar...    72   4e-11
ref|XP_003561396.1| PREDICTED: uncharacterized protein LOC100829...    72   5e-11
ref|XP_003601356.1| hypothetical protein MTR_3g079820 [Medicago ...    72   5e-11
ref|NP_001238276.1| uncharacterized protein LOC100305889 [Glycin...    72   5e-11

>ref|XP_002312864.1| predicted protein [Populus trichocarpa] gi|222849272|gb|EEE86819.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/38 (86%), Positives = 37/38 (97%)
 Frame = +3

Query: 3   GDVGRIVARKPKDVWAVRLAIGTYLIDGKHFRPLDLDE 116
           GDVGRIV+RKPKDVWAVRLAIGTYLIDGK+F+PL+L E
Sbjct: 92  GDVGRIVSRKPKDVWAVRLAIGTYLIDGKYFKPLELSE 129


>dbj|BAJ90403.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326499692|dbj|BAJ86157.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 129

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 30/36 (83%), Positives = 36/36 (100%)
 Frame = +3

Query: 3   GDVGRIVARKPKDVWAVRLAIGTYLIDGKHFRPLDL 110
           GDVGRI+ARKPKDVWAVRLA+GTYL+DGKHF+PL++
Sbjct: 81  GDVGRIIARKPKDVWAVRLAVGTYLLDGKHFKPLEV 116


>ref|XP_003561396.1| PREDICTED: uncharacterized protein LOC100829764 [Brachypodium
           distachyon]
          Length = 145

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 30/36 (83%), Positives = 36/36 (100%)
 Frame = +3

Query: 3   GDVGRIVARKPKDVWAVRLAIGTYLIDGKHFRPLDL 110
           GDVGRI+AR+PKDVWAVRLA+GTYL+DGKHF+PLD+
Sbjct: 96  GDVGRIMARRPKDVWAVRLAVGTYLLDGKHFKPLDV 131


>ref|XP_003601356.1| hypothetical protein MTR_3g079820 [Medicago truncatula]
           gi|355490404|gb|AES71607.1| hypothetical protein
           MTR_3g079820 [Medicago truncatula]
          Length = 128

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/36 (88%), Positives = 36/36 (100%)
 Frame = +3

Query: 3   GDVGRIVARKPKDVWAVRLAIGTYLIDGKHFRPLDL 110
           GDVGRIV+RKPKDVWAVRL+IGTYLIDGK+F+PLDL
Sbjct: 89  GDVGRIVSRKPKDVWAVRLSIGTYLIDGKYFKPLDL 124


>ref|NP_001238276.1| uncharacterized protein LOC100305889 [Glycine max]
           gi|255626895|gb|ACU13792.1| unknown [Glycine max]
          Length = 128

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/38 (84%), Positives = 36/38 (94%)
 Frame = +3

Query: 3   GDVGRIVARKPKDVWAVRLAIGTYLIDGKHFRPLDLDE 116
           GDVGRIV+RKPKDVWAVRL IGTYL+DGK+F+PLDL E
Sbjct: 89  GDVGRIVSRKPKDVWAVRLRIGTYLVDGKYFKPLDLAE 126


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